Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 SUMO2P16-201ENST00000519475 264 ntBASIC2.21□□□□□ -2.06
SSRP1Q08945 AC103810.8-201ENST00000607347 118 ntBASIC2.21□□□□□ -2.06
SSRP1Q08945 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SSRP1Q08945 MIR516B2-201ENST00000385190 85 ntBASIC2.2□□□□□ -2.06
SSRP1Q08945 AL392103.1-201ENST00000447000 198 ntBASIC2.2□□□□□ -2.06
SSRP1Q08945 SNORA25.12-201ENST00000516202 82 ntBASIC2.2□□□□□ -2.06
SSRP1Q08945 RNU6-457P-201ENST00000363999 107 ntBASIC2.19□□□□□ -2.06
SSRP1Q08945 Y_RNA.410-201ENST00000383992 113 ntBASIC2.19□□□□□ -2.06
SSRP1Q08945 MIR526A1-201ENST00000384897 85 ntBASIC2.19□□□□□ -2.06
SSRP1Q08945 MIR513A1-201ENST00000385138 129 ntBASIC2.19□□□□□ -2.06
SSRP1Q08945 MIR569-201ENST00000385228 96 ntBASIC2.19□□□□□ -2.06
SSRP1Q08945 AC019129.1-201ENST00000403786 261 ntBASIC2.19□□□□□ -2.06
SSRP1Q08945 CYCSP49-201ENST00000420810 319 ntBASIC2.19□□□□□ -2.06
SSRP1Q08945 HMGN2P38-201ENST00000423806 265 ntBASIC2.19□□□□□ -2.06
SSRP1Q08945 AF228730.3-201ENST00000436691 102 ntBASIC2.19□□□□□ -2.06
SSRP1Q08945 SNORA77B-201ENST00000578179 125 ntBASIC2.19□□□□□ -2.06
SSRP1Q08945 MIR3935-201ENST00000583472 104 ntBASIC2.19□□□□□ -2.06
SSRP1Q08945 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.18□□□□□ -2.06
SSRP1Q08945 MIR613-201ENST00000385248 95 ntBASIC2.18□□□□□ -2.06
SSRP1Q08945 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SSRP1Q08945 MIR514B-201ENST00000516774 80 ntBASIC2.18□□□□□ -2.06
SSRP1Q08945 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.18□□□□□ -2.06
SSRP1Q08945 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.18□□□□□ -2.06
SSRP1Q08945 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SSRP1Q08945 Y_RNA.37-201ENST00000362606 108 ntBASIC2.17□□□□□ -2.06
SSRP1Q08945 SNORD50.2-201ENST00000365465 70 ntBASIC2.17□□□□□ -2.06
SSRP1Q08945 SNORD77.3-201ENST00000391113 65 ntBASIC2.17□□□□□ -2.06
SSRP1Q08945 AL445685.2-201ENST00000422551 342 ntBASIC2.17□□□□□ -2.06
SSRP1Q08945 AC087499.4-201ENST00000448505 178 ntBASIC2.17□□□□□ -2.06
SSRP1Q08945 RNU7-197P-201ENST00000458836 62 ntBASIC2.17□□□□□ -2.06
SSRP1Q08945 AC092991.1-201ENST00000477176 376 ntBASIC2.17□□□□□ -2.06
SSRP1Q08945 RNU4-57P-201ENST00000515980 135 ntBASIC2.17□□□□□ -2.06
SSRP1Q08945 RNU6-426P-201ENST00000516464 97 ntBASIC2.17□□□□□ -2.06
SSRP1Q08945 RNA5SP364-201ENST00000516938 78 ntBASIC2.17□□□□□ -2.06
SSRP1Q08945 SNORA44.1-201ENST00000517031 108 ntBASIC2.17□□□□□ -2.06
SSRP1Q08945 AC106754.2-201ENST00000623006 233 ntBASIC2.17□□□□□ -2.06
SSRP1Q08945 RNA5SP99-201ENST00000364020 114 ntBASIC2.16□□□□□ -2.06
SSRP1Q08945 RNA5SP259-201ENST00000365541 109 ntBASIC2.16□□□□□ -2.06
SSRP1Q08945 MIR30A-201ENST00000385092 71 ntBASIC2.16□□□□□ -2.06
SSRP1Q08945 RNU6-482P-201ENST00000391068 107 ntBASIC2.16□□□□□ -2.06
SSRP1Q08945 Y_RNA.584-201ENST00000391090 114 ntBASIC2.16□□□□□ -2.06
SSRP1Q08945 SUMO2P12-201ENST00000405924 140 ntBASIC2.16□□□□□ -2.06
SSRP1Q08945 HMGN2P19-201ENST00000425149 265 ntBASIC2.16□□□□□ -2.06
SSRP1Q08945 RPL23AP42-201ENST00000471152 471 ntBASIC2.16□□□□□ -2.06
SSRP1Q08945 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.16□□□□□ -2.06
SSRP1Q08945 AC131055.1-201ENST00000584626 316 ntBASIC2.16□□□□□ -2.06
SSRP1Q08945 AL096840.1-201ENST00000603287 93 ntBASIC2.16□□□□□ -2.06
SSRP1Q08945 Y_RNA.251-201ENST00000364551 99 ntBASIC2.15□□□□□ -2.07
SSRP1Q08945 SNORA2.2-201ENST00000365473 135 ntBASIC2.15□□□□□ -2.07
SSRP1Q08945 RNU6-1189P-201ENST00000383958 107 ntBASIC2.15□□□□□ -2.07
SSRP1Q08945 Y_RNA.497-201ENST00000384447 98 ntBASIC2.15□□□□□ -2.07
SSRP1Q08945 Y_RNA.568-201ENST00000384742 113 ntBASIC2.15□□□□□ -2.07
SSRP1Q08945 RNA5SP489-201ENST00000410986 109 ntBASIC2.15□□□□□ -2.07
SSRP1Q08945 HMGN2P23-201ENST00000456759 269 ntBASIC2.15□□□□□ -2.07
SSRP1Q08945 AC015688.6-201ENST00000577737 104 ntBASIC2.15□□□□□ -2.07
SSRP1Q08945 FAM106DP-201ENST00000586416 501 ntBASIC2.15□□□□□ -2.07
SSRP1Q08945 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.15□□□□□ -2.07
SSRP1Q08945 SNORA16.1-201ENST00000364597 132 ntBASIC2.14□□□□□ -2.07
SSRP1Q08945 U8.17-201ENST00000391292 132 ntBASIC2.14□□□□□ -2.07
SSRP1Q08945 RNU4-61P-201ENST00000411243 107 ntBASIC2.14□□□□□ -2.07
SSRP1Q08945 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.14□□□□□ -2.07
SSRP1Q08945 AC003989.2-201ENST00000440224 169 ntBASIC2.14□□□□□ -2.07
SSRP1Q08945 RNU6-917P-201ENST00000516294 104 ntBASIC2.14□□□□□ -2.07
SSRP1Q08945 AP003484.1-201ENST00000530974 250 ntBASIC2.14□□□□□ -2.07
SSRP1Q08945 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.14□□□□□ -2.07
SSRP1Q08945 MIR5197-201ENST00000583721 112 ntBASIC2.14□□□□□ -2.07
SSRP1Q08945 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
SSRP1Q08945 RNU6-704P-201ENST00000364162 103 ntBASIC2.13□□□□□ -2.07
SSRP1Q08945 MIR653-201ENST00000385279 96 ntBASIC2.13□□□□□ -2.07
SSRP1Q08945 MIR676-201ENST00000390702 67 ntBASIC2.13□□□□□ -2.07
SSRP1Q08945 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.13□□□□□ -2.07
SSRP1Q08945 RNU6-938P-201ENST00000411285 103 ntBASIC2.13□□□□□ -2.07
SSRP1Q08945 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.13□□□□□ -2.07
SSRP1Q08945 snoU13.9-201ENST00000458927 103 ntBASIC2.13□□□□□ -2.07
SSRP1Q08945 RNU6-322P-201ENST00000516010 103 ntBASIC2.13□□□□□ -2.07
SSRP1Q08945 RNA5SP182-201ENST00000516064 82 ntBASIC2.13□□□□□ -2.07
SSRP1Q08945 SNORD36C-201ENST00000516733 66 ntBASIC2.13□□□□□ -2.07
SSRP1Q08945 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.13□□□□□ -2.07
SSRP1Q08945 AC090049.2-201ENST00000550377 109 ntBASIC2.13□□□□□ -2.07
SSRP1Q08945 AP001485.1-201ENST00000604799 199 ntBASIC2.13□□□□□ -2.07
SSRP1Q08945 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SSRP1Q08945 Y_RNA.52-201ENST00000362760 96 ntBASIC2.12□□□□□ -2.07
SSRP1Q08945 RNY1P11-201ENST00000363759 113 ntBASIC2.12□□□□□ -2.07
SSRP1Q08945 Y_RNA.420-201ENST00000384043 110 ntBASIC2.12□□□□□ -2.07
SSRP1Q08945 RNU4-52P-201ENST00000384209 138 ntBASIC2.12□□□□□ -2.07
SSRP1Q08945 RNU6-548P-201ENST00000517083 115 ntBASIC2.12□□□□□ -2.07
SSRP1Q08945 RNU7-181P-201ENST00000517234 74 ntBASIC2.12□□□□□ -2.07
SSRP1Q08945 AC010332.2-201ENST00000613083 1904 ntBASIC2.11□□□□□ -2.07
SSRP1Q08945 SNORA1.2-201ENST00000365189 134 ntBASIC2.11□□□□□ -2.07
SSRP1Q08945 RNU6-460P-201ENST00000391158 108 ntBASIC2.11□□□□□ -2.07
SSRP1Q08945 SNORA40.18-201ENST00000391200 128 ntBASIC2.11□□□□□ -2.07
SSRP1Q08945 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.11□□□□□ -2.07
SSRP1Q08945 AL603825.1-201ENST00000438481 80 ntBASIC2.11□□□□□ -2.07
SSRP1Q08945 SNORD123-201ENST00000459473 70 ntBASIC2.11□□□□□ -2.07
SSRP1Q08945 RN7SL274P-201ENST00000492268 272 ntBASIC2.11□□□□□ -2.07
SSRP1Q08945 SNORA18.7-201ENST00000516910 131 ntBASIC2.11□□□□□ -2.07
SSRP1Q08945 MIR3198-2-201ENST00000577868 80 ntBASIC2.11□□□□□ -2.07
SSRP1Q08945 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.11□□□□□ -2.07
SSRP1Q08945 MIR376A2-201ENST00000636782 80 ntBASIC2.11□□□□□ -2.07
SSRP1Q08945 SNORD115-34-201ENST00000362441 82 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms