Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC141557.1-201ENST00000540982 400 ntBASIC2.65□□□□□ -1.99
PCDH1Q08174 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.65□□□□□ -1.99
PCDH1Q08174 Y_RNA.818-201ENST00000618813 71 ntBASIC2.65□□□□□ -1.99
PCDH1Q08174 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.65□□□□□ -1.99
PCDH1Q08174 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PCDH1Q08174 RNU6-1131P-201ENST00000364955 107 ntBASIC2.64□□□□□ -1.99
PCDH1Q08174 SNORA1.2-201ENST00000365189 134 ntBASIC2.64□□□□□ -1.99
PCDH1Q08174 MIR516B2-201ENST00000385190 85 ntBASIC2.64□□□□□ -1.99
PCDH1Q08174 RNU2-7P-201ENST00000410794 178 ntBASIC2.64□□□□□ -1.99
PCDH1Q08174 AL135938.1-201ENST00000443141 297 ntBASIC2.64□□□□□ -1.99
PCDH1Q08174 RPL39P25-201ENST00000449384 154 ntBASIC2.64□□□□□ -1.99
PCDH1Q08174 RNU6-109P-201ENST00000516364 107 ntBASIC2.64□□□□□ -1.99
PCDH1Q08174 RNU6-184P-201ENST00000516514 107 ntBASIC2.64□□□□□ -1.99
PCDH1Q08174 SCARNA16.3-201ENST00000516595 184 ntBASIC2.64□□□□□ -1.99
PCDH1Q08174 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.64□□□□□ -1.99
PCDH1Q08174 SUB1P4-201ENST00000566062 339 ntBASIC2.64□□□□□ -1.99
PCDH1Q08174 MIR4658-201ENST00000584344 65 ntBASIC2.64□□□□□ -1.99
PCDH1Q08174 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PCDH1Q08174 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
PCDH1Q08174 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
PCDH1Q08174 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PCDH1Q08174 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
PCDH1Q08174 HMGN2P39-201ENST00000398005 273 ntBASIC2.63□□□□□ -1.99
PCDH1Q08174 AL138827.1-201ENST00000402666 306 ntBASIC2.63□□□□□ -1.99
PCDH1Q08174 MIR1302-4-201ENST00000408701 150 ntBASIC2.63□□□□□ -1.99
PCDH1Q08174 MIR1912-201ENST00000410389 80 ntBASIC2.63□□□□□ -1.99
PCDH1Q08174 AL512326.2-201ENST00000426359 151 ntBASIC2.63□□□□□ -1.99
PCDH1Q08174 UBL5P3-201ENST00000475112 231 ntBASIC2.63□□□□□ -1.99
PCDH1Q08174 RPL23AP63-201ENST00000498752 471 ntBASIC2.63□□□□□ -1.99
PCDH1Q08174 RNU6-904P-201ENST00000516206 101 ntBASIC2.63□□□□□ -1.99
PCDH1Q08174 SNORA31.15-201ENST00000516771 132 ntBASIC2.63□□□□□ -1.99
PCDH1Q08174 RNA5SP437-201ENST00000517249 129 ntBASIC2.63□□□□□ -1.99
PCDH1Q08174 AC004812.1-201ENST00000540773 146 ntBASIC2.63□□□□□ -1.99
PCDH1Q08174 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.63□□□□□ -1.99
PCDH1Q08174 AC092881.1-201ENST00000638218 2733 ntBASIC2.63□□□□□ -1.99
PCDH1Q08174 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.63□□□□□ -1.99
PCDH1Q08174 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PCDH1Q08174 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PCDH1Q08174 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PCDH1Q08174 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PCDH1Q08174 SNORA80A-201ENST00000363922 136 ntBASIC2.62□□□□□ -1.99
PCDH1Q08174 RNU6-294P-201ENST00000364999 102 ntBASIC2.62□□□□□ -1.99
PCDH1Q08174 MIR136-201ENST00000385207 82 ntBASIC2.62□□□□□ -1.99
PCDH1Q08174 RNU6-816P-201ENST00000390914 107 ntBASIC2.62□□□□□ -1.99
PCDH1Q08174 RNU6-1268P-201ENST00000391214 107 ntBASIC2.62□□□□□ -1.99
PCDH1Q08174 RNU6-1239P-201ENST00000391310 107 ntBASIC2.62□□□□□ -1.99
PCDH1Q08174 RNU7-34P-201ENST00000459394 64 ntBASIC2.62□□□□□ -1.99
PCDH1Q08174 RPS23P4-201ENST00000487908 423 ntBASIC2.62□□□□□ -1.99
PCDH1Q08174 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.62□□□□□ -1.99
PCDH1Q08174 RNA5SP367-201ENST00000516557 118 ntBASIC2.62□□□□□ -1.99
PCDH1Q08174 MIR3670-2-201ENST00000582974 65 ntBASIC2.62□□□□□ -1.99
PCDH1Q08174 MIR3670-1-201ENST00000584160 65 ntBASIC2.62□□□□□ -1.99
PCDH1Q08174 MIR3670-3-201ENST00000584855 65 ntBASIC2.62□□□□□ -1.99
PCDH1Q08174 MIR3670-4-201ENST00000612260 65 ntBASIC2.62□□□□□ -1.99
PCDH1Q08174 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PCDH1Q08174 Y_RNA.370-201ENST00000365589 108 ntBASIC2.61□□□□□ -1.99
PCDH1Q08174 SNORA70.7-201ENST00000384159 133 ntBASIC2.61□□□□□ -1.99
PCDH1Q08174 Y_RNA.531-201ENST00000384589 121 ntBASIC2.61□□□□□ -1.99
PCDH1Q08174 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.61□□□□□ -1.99
PCDH1Q08174 POLR2J4-204ENST00000418424 324 ntBASIC2.61□□□□□ -1.99
PCDH1Q08174 AC093850.1-201ENST00000454121 251 ntBASIC2.61□□□□□ -1.99
PCDH1Q08174 MIR4709-201ENST00000577272 72 ntBASIC2.61□□□□□ -1.99
PCDH1Q08174 MIR4446-201ENST00000578505 67 ntBASIC2.61□□□□□ -1.99
PCDH1Q08174 RPL12P50-201ENST00000603116 116 ntBASIC2.61□□□□□ -1.99
PCDH1Q08174 AC087741.2-201ENST00000619415 172 ntBASIC2.61□□□□□ -1.99
PCDH1Q08174 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
PCDH1Q08174 RNU6-112P-201ENST00000363599 104 ntBASIC2.6□□□□□ -1.99
PCDH1Q08174 RNU6-49P-201ENST00000384256 107 ntBASIC2.6□□□□□ -1.99
PCDH1Q08174 RNA5SP501-201ENST00000410990 112 ntBASIC2.6□□□□□ -1.99
PCDH1Q08174 AC087499.2-201ENST00000432861 149 ntBASIC2.6□□□□□ -1.99
PCDH1Q08174 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.6□□□□□ -1.99
PCDH1Q08174 RNU7-45P-201ENST00000459460 63 ntBASIC2.6□□□□□ -1.99
PCDH1Q08174 RNA5SP282-201ENST00000516355 108 ntBASIC2.6□□□□□ -1.99
PCDH1Q08174 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.6□□□□□ -1.99
PCDH1Q08174 RNU6-158P-201ENST00000517104 100 ntBASIC2.6□□□□□ -1.99
PCDH1Q08174 AC079600.2-201ENST00000550076 130 ntBASIC2.6□□□□□ -1.99
PCDH1Q08174 ELOCP29-201ENST00000588193 334 ntBASIC2.6□□□□□ -1.99
PCDH1Q08174 AC006023.1-201ENST00000603944 259 ntBASIC2.6□□□□□ -1.99
PCDH1Q08174 AC021506.2-201ENST00000612354 169 ntBASIC2.6□□□□□ -1.99
PCDH1Q08174 AL513423.1-201ENST00000621695 132 ntBASIC2.6□□□□□ -1.99
PCDH1Q08174 FO624990.1-201ENST00000636373 85 ntBASIC2.6□□□□□ -1.99
PCDH1Q08174 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PCDH1Q08174 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
PCDH1Q08174 RNU6-661P-201ENST00000362409 107 ntBASIC2.59□□□□□ -1.99
PCDH1Q08174 RNU1-112P-201ENST00000364401 164 ntBASIC2.59□□□□□ -1.99
PCDH1Q08174 RNU6-296P-201ENST00000384608 107 ntBASIC2.59□□□□□ -1.99
PCDH1Q08174 RN7SKP192-201ENST00000411291 327 ntBASIC2.59□□□□□ -1.99
PCDH1Q08174 RNU6-893P-201ENST00000458841 100 ntBASIC2.59□□□□□ -1.99
PCDH1Q08174 RNU7-53P-201ENST00000516705 60 ntBASIC2.59□□□□□ -1.99
PCDH1Q08174 RNA5SP481-201ENST00000516814 122 ntBASIC2.59□□□□□ -1.99
PCDH1Q08174 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.59□□□□□ -1.99
PCDH1Q08174 SNORD73B-201ENST00000364394 72 ntBASIC2.58□□□□□ -2
PCDH1Q08174 Y_RNA.299-201ENST00000364973 94 ntBASIC2.58□□□□□ -2
PCDH1Q08174 Y_RNA.507-201ENST00000384500 99 ntBASIC2.58□□□□□ -2
PCDH1Q08174 RNU6-1319P-201ENST00000390855 104 ntBASIC2.58□□□□□ -2
PCDH1Q08174 RNU6-747P-201ENST00000390928 104 ntBASIC2.58□□□□□ -2
PCDH1Q08174 RNU6-241P-201ENST00000391148 104 ntBASIC2.58□□□□□ -2
PCDH1Q08174 RNU6-177P-201ENST00000411257 104 ntBASIC2.58□□□□□ -2
PCDH1Q08174 MTATP8P2-201ENST00000435212 202 ntBASIC2.58□□□□□ -2
PCDH1Q08174 RNU7-67P-201ENST00000459003 62 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms