Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 SNORD115-29-201ENST00000362834 82 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 SNORD115-9-201ENST00000362912 82 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 SNORD115-21-201ENST00000362963 81 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 SNORD115-14-201ENST00000363090 81 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 SNORD115-13-201ENST00000363358 82 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 RNU6-1099P-201ENST00000363533 107 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 SNORD115-41-201ENST00000363608 82 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 SNORD115-11-201ENST00000363616 82 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 SNORD115-5-201ENST00000363633 82 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 SNORD115-39-201ENST00000363694 82 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 SNORD115-4-201ENST00000363810 82 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 SNORD115-16-201ENST00000363887 82 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 SNORD115-6-201ENST00000363942 82 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 SNORD115-42-201ENST00000364273 82 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 SNORD115-15-201ENST00000364809 81 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 SNORD115-1-201ENST00000364961 82 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 SNORD115-26-201ENST00000365067 82 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 SNORD115-10-201ENST00000365073 81 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 SNORD115-43-201ENST00000365503 82 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 SNORD115-36-201ENST00000365629 82 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 RNU1-109P-201ENST00000383960 147 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 RNU6-820P-201ENST00000384273 107 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 Y_RNA.507-201ENST00000384500 99 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 AC092427.1-202ENST00000430569 476 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.7□□□□□ -1.98
SOX4Q06945 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 AP003327.1-201ENST00000529684 127 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 AC005786.1-201ENST00000588553 154 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 U4.3-201ENST00000621047 82 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 AC021613.1-201ENST00000623880 111 ntBASIC2.7□□□□□ -1.98
SOX4Q06945 MAPK10-266ENST00000641066 6555 ntBASIC2.69□□□□□ -1.98
SOX4Q06945 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.69□□□□□ -1.98
SOX4Q06945 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
SOX4Q06945 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SOX4Q06945 RNU6-1019P-201ENST00000364424 107 ntBASIC2.69□□□□□ -1.98
SOX4Q06945 RNU6-573P-201ENST00000383938 106 ntBASIC2.69□□□□□ -1.98
SOX4Q06945 Y_RNA.466-201ENST00000384294 113 ntBASIC2.69□□□□□ -1.98
SOX4Q06945 RNU6-424P-201ENST00000384367 105 ntBASIC2.69□□□□□ -1.98
SOX4Q06945 Y_RNA.531-201ENST00000384589 121 ntBASIC2.69□□□□□ -1.98
SOX4Q06945 Y_RNA.601-201ENST00000410500 113 ntBASIC2.69□□□□□ -1.98
SOX4Q06945 RPS23P4-201ENST00000487908 423 ntBASIC2.69□□□□□ -1.98
SOX4Q06945 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.69□□□□□ -1.98
SOX4Q06945 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.69□□□□□ -1.98
SOX4Q06945 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.69□□□□□ -1.98
SOX4Q06945 AC026421.1-201ENST00000519101 163 ntBASIC2.69□□□□□ -1.98
SOX4Q06945 AC090821.2-201ENST00000523552 176 ntBASIC2.69□□□□□ -1.98
SOX4Q06945 MIR3618-201ENST00000580330 88 ntBASIC2.69□□□□□ -1.98
SOX4Q06945 AL513534.2-201ENST00000603836 250 ntBASIC2.69□□□□□ -1.98
SOX4Q06945 AL449363.1-201ENST00000617815 186 ntBASIC2.69□□□□□ -1.98
SOX4Q06945 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
SOX4Q06945 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.68□□□□□ -1.98
SOX4Q06945 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.68□□□□□ -1.98
SOX4Q06945 RNU6-661P-201ENST00000362409 107 ntBASIC2.68□□□□□ -1.98
SOX4Q06945 SNORD88.1-201ENST00000408684 91 ntBASIC2.68□□□□□ -1.98
SOX4Q06945 RNU7-181P-201ENST00000517234 74 ntBASIC2.68□□□□□ -1.98
SOX4Q06945 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.68□□□□□ -1.98
SOX4Q06945 IGLV3-17-201ENST00000519099 244 ntBASIC2.68□□□□□ -1.98
SOX4Q06945 FAM71BP1-201ENST00000604431 523 ntBASIC2.68□□□□□ -1.98
SOX4Q06945 Y_RNA.773-201ENST00000607168 90 ntBASIC2.68□□□□□ -1.98
SOX4Q06945 AC022202.1-201ENST00000613515 211 ntBASIC2.68□□□□□ -1.98
SOX4Q06945 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.68□□□□□ -1.98
SOX4Q06945 MIR1245B-201ENST00000636115 69 ntBASIC2.68□□□□□ -1.98
SOX4Q06945 MIR1255B1-201ENST00000636325 63 ntBASIC2.68□□□□□ -1.98
SOX4Q06945 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SOX4Q06945 AL442644.1-201ENST00000454390 3105 ntBASIC2.67□□□□□ -1.98
SOX4Q06945 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SOX4Q06945 AC092881.1-201ENST00000638218 2733 ntBASIC2.67□□□□□ -1.98
SOX4Q06945 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.67□□□□□ -1.98
SOX4Q06945 RNU1-58P-201ENST00000362413 163 ntBASIC2.67□□□□□ -1.98
SOX4Q06945 RNU6-363P-201ENST00000362895 105 ntBASIC2.67□□□□□ -1.98
SOX4Q06945 SNORD115-19-201ENST00000363098 82 ntBASIC2.67□□□□□ -1.98
SOX4Q06945 SNORD115-18-201ENST00000363293 82 ntBASIC2.67□□□□□ -1.98
SOX4Q06945 Y_RNA.155-201ENST00000363632 101 ntBASIC2.67□□□□□ -1.98
SOX4Q06945 SNORD115-17-201ENST00000364612 82 ntBASIC2.67□□□□□ -1.98
SOX4Q06945 RNU6-1134P-201ENST00000365156 101 ntBASIC2.67□□□□□ -1.98
SOX4Q06945 MIR1267-201ENST00000408723 78 ntBASIC2.67□□□□□ -1.98
SOX4Q06945 POLR2J4-204ENST00000418424 324 ntBASIC2.67□□□□□ -1.98
SOX4Q06945 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.67□□□□□ -1.98
SOX4Q06945 RNU6-893P-201ENST00000458841 100 ntBASIC2.67□□□□□ -1.98
SOX4Q06945 RNU2-11P-201ENST00000459191 187 ntBASIC2.67□□□□□ -1.98
SOX4Q06945 RNA5SP57-201ENST00000459463 123 ntBASIC2.67□□□□□ -1.98
SOX4Q06945 AC069114.2-201ENST00000604699 304 ntBASIC2.67□□□□□ -1.98
SOX4Q06945 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.67□□□□□ -1.98
SOX4Q06945 AL590808.1-201ENST00000618696 141 ntBASIC2.67□□□□□ -1.98
SOX4Q06945 AC095038.3-201ENST00000634439 195 ntBASIC2.67□□□□□ -1.98
SOX4Q06945 MIR203B-201ENST00000636080 86 ntBASIC2.67□□□□□ -1.98
SOX4Q06945 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.66□□□□□ -1.98
SOX4Q06945 Y_RNA.10-201ENST00000362371 110 ntBASIC2.66□□□□□ -1.98
SOX4Q06945 U8.16-201ENST00000391279 133 ntBASIC2.66□□□□□ -1.98
SOX4Q06945 RNU6-592P-201ENST00000411333 103 ntBASIC2.66□□□□□ -1.98
SOX4Q06945 AC008413.1-201ENST00000511864 177 ntBASIC2.66□□□□□ -1.98
SOX4Q06945 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.66□□□□□ -1.98
SOX4Q06945 MIR494-201ENST00000349529 81 ntBASIC2.65□□□□□ -1.99
SOX4Q06945 RNU6-833P-201ENST00000363486 107 ntBASIC2.65□□□□□ -1.99
SOX4Q06945 Y_RNA.299-201ENST00000364973 94 ntBASIC2.65□□□□□ -1.99
SOX4Q06945 SNORA4.2-201ENST00000365313 147 ntBASIC2.65□□□□□ -1.99
SOX4Q06945 RNU6-409P-201ENST00000384114 104 ntBASIC2.65□□□□□ -1.99
SOX4Q06945 MIR29C-201ENST00000385231 88 ntBASIC2.65□□□□□ -1.99
SOX4Q06945 RNU6-1275P-201ENST00000391087 107 ntBASIC2.65□□□□□ -1.99
SOX4Q06945 AL359511.1-201ENST00000402970 211 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms