| MUC3A | Q02505 | RNU6-449P-201 | ENST00000383914 | 107 nt | BASIC | -2.42 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | AL359634.1-202 | ENST00000404721 | 284 nt | BASIC | -2.42 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | MIR4791-201 | ENST00000607666 | 84 nt | BASIC | -2.42 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | MTND4P25-201 | ENST00000441039 | 533 nt | BASIC | -2.42 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | Z83846.1-201 | ENST00000446798 | 265 nt | BASIC | -2.42 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | AF250324.2-201 | ENST00000608299 | 610 nt | BASIC | -2.42 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | RNU6-563P-201 | ENST00000364872 | 108 nt | BASIC | -2.43 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | AC092755.1-201 | ENST00000441746 | 97 nt | TSL 3 BASIC | -2.43 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | RNU6-1240P-201 | ENST00000365155 | 104 nt | BASIC | -2.43 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | Y_RNA.394-201 | ENST00000383942 | 103 nt | BASIC | -2.43 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | MTATP6P19-201 | ENST00000413797 | 659 nt | BASIC | -2.43 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | Y_RNA.631-201 | ENST00000459607 | 101 nt | BASIC | -2.43 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | AC231657.1-201 | ENST00000624313 | 397 nt | BASIC | -2.43 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | RNU6-223P-201 | ENST00000362830 | 107 nt | BASIC | -2.43 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | ZNF321P-202 | ENST00000550843 | 495 nt | BASIC | -2.43 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | RNU6-1260P-201 | ENST00000362944 | 107 nt | BASIC | -2.44 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | Y_RNA.179-201 | ENST00000363844 | 90 nt | BASIC | -2.44 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | Y_RNA.353-201 | ENST00000365440 | 108 nt | BASIC | -2.44 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | MIR626-201 | ENST00000385032 | 94 nt | BASIC | -2.44 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | Six3os1_7.1-201 | ENST00000621512 | 201 nt | BASIC | -2.44 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | RNU6-1238P-201 | ENST00000517215 | 102 nt | BASIC | -2.44 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | RNU6-766P-201 | ENST00000362478 | 107 nt | BASIC | -2.45 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | RNU6-102P-201 | ENST00000384485 | 104 nt | BASIC | -2.45 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | MIR519E-201 | ENST00000385075 | 84 nt | BASIC | -2.45 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | RNU2-29P-201 | ENST00000410423 | 189 nt | BASIC | -2.45 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | AC137590.2-201 | ENST00000619709 | 240 nt | BASIC | -2.45 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | SNORD51.1-201 | ENST00000365405 | 77 nt | BASIC | -2.45 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | BX295541.1-201 | ENST00000417774 | 250 nt | BASIC | -2.45 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | AC005520.5-201 | ENST00000613926 | 164 nt | BASIC | -2.45 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | RNU6-1040P-201 | ENST00000383974 | 107 nt | BASIC | -2.45 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | MIR5006-201 | ENST00000583027 | 110 nt | BASIC | -2.45 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | SNORD19-201 | ENST00000391191 | 68 nt | BASIC | -2.46 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | snoU109.3-201 | ENST00000459477 | 145 nt | BASIC | -2.46 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | AC091948.2-201 | ENST00000636510 | 279 nt | BASIC | -2.46 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | Y_RNA.62-201 | ENST00000362840 | 99 nt | BASIC | -2.46 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | RNU6-166P-201 | ENST00000384371 | 107 nt | BASIC | -2.46 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | RNU7-57P-201 | ENST00000459540 | 60 nt | BASIC | -2.46 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | SNORD38C-201 | ENST00000384381 | 69 nt | BASIC | -2.47 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | AC009480.1-201 | ENST00000402410 | 412 nt | TSL 3 BASIC | -2.47 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | USP9YP30-201 | ENST00000430729 | 455 nt | BASIC | -2.47 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | MTND1P33-201 | ENST00000446251 | 917 nt | BASIC | -2.47 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | MIR548H5-201 | ENST00000580314 | 60 nt | BASIC | -2.47 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | MIR3920-201 | ENST00000581751 | 86 nt | BASIC | -2.47 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | snoZ196.1-201 | ENST00000625269 | 89 nt | BASIC | -2.47 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | HTN1-201 | ENST00000246896 | 580 nt | APPRIS P1 TSL 1 (best) BASIC | -2.47 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | AL355314.1-201 | ENST00000453639 | 316 nt | TSL 5 BASIC | -2.47 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | AL731768.1-201 | ENST00000603124 | 139 nt | BASIC | -2.47 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | U6.107-201 | ENST00000637108 | 79 nt | BASIC | -2.47 | □□□□□ -2.8 | | |
| MUC3A | Q02505 | MIR582-201 | ENST00000365731 | 98 nt | BASIC | -2.47 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | RNU6-637P-201 | ENST00000384050 | 107 nt | BASIC | -2.47 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | RNU6-1179P-201 | ENST00000384667 | 107 nt | BASIC | -2.47 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | RNU6-971P-201 | ENST00000516920 | 106 nt | BASIC | -2.47 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | MIR23C-201 | ENST00000579846 | 100 nt | BASIC | -2.47 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | MIR4438-201 | ENST00000585271 | 93 nt | BASIC | -2.47 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | AC009159.2-201 | ENST00000617603 | 606 nt | BASIC | -2.48 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | RNU6-1339P-201 | ENST00000363574 | 91 nt | BASIC | -2.48 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | RNU6-847P-201 | ENST00000411115 | 108 nt | BASIC | -2.48 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | AC096949.1-201 | ENST00000412047 | 152 nt | BASIC | -2.48 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | PLCH1-AS2-201 | ENST00000472913 | 408 nt | TSL 2 BASIC | -2.48 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | CCDC7-207 | ENST00000535327 | 700 nt | APPRIS ALT2 TSL 1 (best) BASIC | -2.48 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | RNU6-961P-201 | ENST00000363893 | 105 nt | BASIC | -2.48 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | Y_RNA.342-201 | ENST00000365352 | 113 nt | BASIC | -2.48 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | AC113618.1-201 | ENST00000416747 | 285 nt | BASIC | -2.48 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | AC010975.2-201 | ENST00000427781 | 588 nt | BASIC | -2.48 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | RNU6-1208P-201 | ENST00000459588 | 107 nt | BASIC | -2.48 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | RNU7-10P-201 | ENST00000607194 | 63 nt | BASIC | -2.48 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | Y_RNA.33-201 | ENST00000362591 | 102 nt | BASIC | -2.49 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | SNORD114-4-201 | ENST00000363962 | 75 nt | BASIC | -2.49 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | RNU6-596P-201 | ENST00000365395 | 98 nt | BASIC | -2.49 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | Y_RNA.623-201 | ENST00000411128 | 95 nt | BASIC | -2.49 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | UBE2V1P11-201 | ENST00000411559 | 285 nt | BASIC | -2.49 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | RNU6-341P-201 | ENST00000516973 | 96 nt | BASIC | -2.49 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | AL358944.1-201 | ENST00000528537 | 144 nt | BASIC | -2.49 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | AL121757.2-201 | ENST00000611223 | 313 nt | BASIC | -2.49 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | Y_RNA.463-201 | ENST00000384271 | 102 nt | BASIC | -2.49 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | AC008568.1-203 | ENST00000433406 | 765 nt | TSL 3 BASIC | -2.49 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | MIR548AG2-201 | ENST00000581228 | 64 nt | BASIC | -2.49 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | RNU6ATAC41P-201 | ENST00000408600 | 126 nt | BASIC | -2.5 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | RNU6-1245P-201 | ENST00000411130 | 106 nt | BASIC | -2.5 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | AC002542.1-201 | ENST00000440683 | 193 nt | BASIC | -2.5 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | AP000542.1-201 | ENST00000448473 | 371 nt | BASIC | -2.5 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | AC091178.2-201 | ENST00000584401 | 117 nt | BASIC | -2.5 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | AL450270.1-201 | ENST00000606160 | 391 nt | BASIC | -2.5 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | AC097635.1-201 | ENST00000450678 | 155 nt | BASIC | -2.5 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | SNORD115-8-201 | ENST00000363856 | 82 nt | BASIC | -2.5 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | RNU6-324P-201 | ENST00000363957 | 106 nt | BASIC | -2.5 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | CoTC_ribozyme.1-201 | ENST00000408104 | 192 nt | BASIC | -2.5 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | snoU13.8-201 | ENST00000458890 | 104 nt | BASIC | -2.5 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | Y_RNA.698-201 | ENST00000516798 | 118 nt | BASIC | -2.5 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | AP001836.1-201 | ENST00000604675 | 523 nt | BASIC | -2.5 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | RNU6-774P-201 | ENST00000363238 | 107 nt | BASIC | -2.51 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | RNY4P13-201 | ENST00000384284 | 96 nt | BASIC | -2.51 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | MTND1P34-201 | ENST00000438556 | 671 nt | BASIC | -2.51 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | MTND3P4-201 | ENST00000453537 | 303 nt | BASIC | -2.51 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | AC010486.2-201 | ENST00000505572 | 483 nt | BASIC | -2.51 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | AC090616.2-202 | ENST00000584248 | 222 nt | BASIC | -2.51 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | AC104996.3-201 | ENST00000590718 | 94 nt | BASIC | -2.51 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | RNU6-1286P-201 | ENST00000383871 | 107 nt | BASIC | -2.51 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | MIR586-201 | ENST00000385035 | 97 nt | BASIC | -2.51 | □□□□□ -2.81 | | |
| MUC3A | Q02505 | MIR548E-201 | ENST00000408287 | 88 nt | BASIC | -2.51 | □□□□□ -2.81 | | |