Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 MIR5694-201ENST00000581190 76 ntBASIC2.07□□□□□ -2.08
IRF9Q00978 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.07□□□□□ -2.08
IRF9Q00978 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
IRF9Q00978 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
IRF9Q00978 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.07□□□□□ -2.08
IRF9Q00978 Y_RNA.71-201ENST00000362892 104 ntBASIC2.06□□□□□ -2.08
IRF9Q00978 RNU6-457P-201ENST00000363999 107 ntBASIC2.06□□□□□ -2.08
IRF9Q00978 RNU6-309P-201ENST00000364573 106 ntBASIC2.06□□□□□ -2.08
IRF9Q00978 RNA5SP37-201ENST00000365420 130 ntBASIC2.06□□□□□ -2.08
IRF9Q00978 RNU6-80P-201ENST00000384195 107 ntBASIC2.06□□□□□ -2.08
IRF9Q00978 RNU6-1081P-201ENST00000384537 107 ntBASIC2.06□□□□□ -2.08
IRF9Q00978 U8.17-201ENST00000391292 132 ntBASIC2.06□□□□□ -2.08
IRF9Q00978 MIR1261-201ENST00000408659 82 ntBASIC2.06□□□□□ -2.08
IRF9Q00978 RNU2-51P-201ENST00000410708 197 ntBASIC2.06□□□□□ -2.08
IRF9Q00978 AL161935.2-201ENST00000414627 60 ntBASIC2.06□□□□□ -2.08
IRF9Q00978 AC008267.6-201ENST00000441664 139 ntBASIC2.06□□□□□ -2.08
IRF9Q00978 RNU6-479P-201ENST00000516348 105 ntBASIC2.06□□□□□ -2.08
IRF9Q00978 RNU6-1234P-201ENST00000516877 103 ntBASIC2.06□□□□□ -2.08
IRF9Q00978 SNORA18.7-201ENST00000516910 131 ntBASIC2.06□□□□□ -2.08
IRF9Q00978 IGLV3-17-201ENST00000519099 244 ntBASIC2.06□□□□□ -2.08
IRF9Q00978 MIR3121-201ENST00000579680 77 ntBASIC2.06□□□□□ -2.08
IRF9Q00978 AC002984.1-201ENST00000591692 448 ntBASIC2.06□□□□□ -2.08
IRF9Q00978 AC095038.3-201ENST00000634439 195 ntBASIC2.06□□□□□ -2.08
IRF9Q00978 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
IRF9Q00978 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
IRF9Q00978 RNU6-508P-201ENST00000363231 103 ntBASIC2.05□□□□□ -2.08
IRF9Q00978 Y_RNA.241-201ENST00000364470 117 ntBASIC2.05□□□□□ -2.08
IRF9Q00978 SNORD116-14-201ENST00000383894 92 ntBASIC2.05□□□□□ -2.08
IRF9Q00978 SNORD116-17-201ENST00000383929 92 ntBASIC2.05□□□□□ -2.08
IRF9Q00978 SNORD116-15-201ENST00000384445 92 ntBASIC2.05□□□□□ -2.08
IRF9Q00978 SNORD116-19-201ENST00000384729 92 ntBASIC2.05□□□□□ -2.08
IRF9Q00978 SNORA40.5-201ENST00000391061 128 ntBASIC2.05□□□□□ -2.08
IRF9Q00978 MIR1267-201ENST00000408723 78 ntBASIC2.05□□□□□ -2.08
IRF9Q00978 RNA5SP425-201ENST00000410336 112 ntBASIC2.05□□□□□ -2.08
IRF9Q00978 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.05□□□□□ -2.08
IRF9Q00978 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.05□□□□□ -2.08
IRF9Q00978 RNU5E-3P-201ENST00000515913 68 ntBASIC2.05□□□□□ -2.08
IRF9Q00978 RNU7-181P-201ENST00000517234 74 ntBASIC2.05□□□□□ -2.08
IRF9Q00978 SUMO2P16-201ENST00000519475 264 ntBASIC2.05□□□□□ -2.08
IRF9Q00978 DEFB122-202ENST00000569013 197 ntBASIC2.05□□□□□ -2.08
IRF9Q00978 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.05□□□□□ -2.08
IRF9Q00978 AL022345.2-201ENST00000606307 135 ntBASIC2.05□□□□□ -2.08
IRF9Q00978 AL365222.1-201ENST00000614661 98 ntBASIC2.05□□□□□ -2.08
IRF9Q00978 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.04□□□□□ -2.08
IRF9Q00978 Y_RNA.127-201ENST00000363386 109 ntBASIC2.04□□□□□ -2.08
IRF9Q00978 Y_RNA.280-201ENST00000364765 112 ntBASIC2.04□□□□□ -2.08
IRF9Q00978 AL627390.1-201ENST00000396055 340 ntBASIC2.04□□□□□ -2.08
IRF9Q00978 AL023284.1-201ENST00000403956 276 ntBASIC2.04□□□□□ -2.08
IRF9Q00978 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.04□□□□□ -2.08
IRF9Q00978 Y_RNA.651-201ENST00000459380 103 ntBASIC2.04□□□□□ -2.08
IRF9Q00978 RNU6-313P-201ENST00000516317 112 ntBASIC2.04□□□□□ -2.08
IRF9Q00978 RNU1-40P-201ENST00000516816 164 ntBASIC2.04□□□□□ -2.08
IRF9Q00978 RNU1-97P-201ENST00000516872 164 ntBASIC2.04□□□□□ -2.08
IRF9Q00978 AC121758.2-201ENST00000553271 193 ntBASIC2.04□□□□□ -2.08
IRF9Q00978 MIR548AI-201ENST00000579940 88 ntBASIC2.04□□□□□ -2.08
IRF9Q00978 FAM106DP-201ENST00000586416 501 ntBASIC2.04□□□□□ -2.08
IRF9Q00978 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.04□□□□□ -2.08
IRF9Q00978 AC106754.2-201ENST00000623006 233 ntBASIC2.04□□□□□ -2.08
IRF9Q00978 SNORD115-34-201ENST00000362441 82 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-12-201ENST00000362583 82 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-29-201ENST00000362834 82 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-9-201ENST00000362912 82 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-21-201ENST00000362963 81 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-14-201ENST00000363090 81 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 Y_RNA.114-201ENST00000363265 113 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-13-201ENST00000363358 82 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-41-201ENST00000363608 82 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-11-201ENST00000363616 82 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-5-201ENST00000363633 82 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-39-201ENST00000363694 82 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-4-201ENST00000363810 82 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-16-201ENST00000363887 82 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-6-201ENST00000363942 82 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-42-201ENST00000364273 82 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-15-201ENST00000364809 81 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-1-201ENST00000364961 82 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-26-201ENST00000365067 82 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-10-201ENST00000365073 81 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORA1.2-201ENST00000365189 134 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-43-201ENST00000365503 82 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-36-201ENST00000365629 82 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORA27-201ENST00000384323 126 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 RNU6-1168P-201ENST00000390831 104 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 RNU6-1154P-201ENST00000391001 104 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 RNU1-41P-201ENST00000516161 162 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 RNU6-1333P-201ENST00000516162 93 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 RNU1-48P-201ENST00000516400 162 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 AC090821.2-201ENST00000523552 176 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNRPGP19-201ENST00000603826 189 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SNORD115-40-201ENST00000606510 82 ntBASIC2.03□□□□□ -2.08
IRF9Q00978 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
IRF9Q00978 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
IRF9Q00978 MIR513A1-201ENST00000385138 129 ntBASIC2.02□□□□□ -2.09
IRF9Q00978 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
IRF9Q00978 AL158147.1-201ENST00000443970 75 ntBASIC2.02□□□□□ -2.09
IRF9Q00978 SNORD123-201ENST00000459473 70 ntBASIC2.02□□□□□ -2.09
IRF9Q00978 RPS26P48-201ENST00000491713 339 ntBASIC2.02□□□□□ -2.09
IRF9Q00978 RNU6-917P-201ENST00000516294 104 ntBASIC2.02□□□□□ -2.09
IRF9Q00978 RNU7-70P-201ENST00000516941 66 ntBASIC2.02□□□□□ -2.09
IRF9Q00978 Y_RNA.783-201ENST00000613546 102 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms