Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNA5SP475-201ENST00000410568 110 ntBASIC-0.98□□□□□ -2.57
PRKDCP78527 MTND3P8-201ENST00000412909 339 ntBASIC-0.98□□□□□ -2.57
PRKDCP78527 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.98□□□□□ -2.57
PRKDCP78527 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.98□□□□□ -2.57
PRKDCP78527 MIR507-201ENST00000385234 94 ntBASIC-0.98□□□□□ -2.57
PRKDCP78527 RNU6-298P-201ENST00000390888 96 ntBASIC-0.98□□□□□ -2.57
PRKDCP78527 MTND3P13-201ENST00000574391 343 ntBASIC-0.98□□□□□ -2.57
PRKDCP78527 AC022441.3-201ENST00000605737 136 ntBASIC-0.98□□□□□ -2.57
PRKDCP78527 MIR6818-201ENST00000621576 65 ntBASIC-0.98□□□□□ -2.57
PRKDCP78527 MIR342-201ENST00000362212 99 ntBASIC-0.99□□□□□ -2.57
PRKDCP78527 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.99□□□□□ -2.57
PRKDCP78527 RNU6-83P-201ENST00000384568 112 ntBASIC-0.99□□□□□ -2.57
PRKDCP78527 RPL22P17-201ENST00000438729 315 ntBASIC-0.99□□□□□ -2.57
PRKDCP78527 RNU7-55P-201ENST00000459426 62 ntBASIC-0.99□□□□□ -2.57
PRKDCP78527 RNU7-175P-201ENST00000515915 61 ntBASIC-0.99□□□□□ -2.57
PRKDCP78527 AC064836.2-201ENST00000609491 462 ntBASIC-0.99□□□□□ -2.57
PRKDCP78527 AC009159.2-201ENST00000617603 606 ntBASIC-0.99□□□□□ -2.57
PRKDCP78527 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.99□□□□□ -2.57
PRKDCP78527 RNU6-336P-201ENST00000364891 107 ntBASIC-0.99□□□□□ -2.57
PRKDCP78527 SNORD12C-201ENST00000386307 89 ntBASIC-0.99□□□□□ -2.57
PRKDCP78527 SNORD70.1-201ENST00000391007 85 ntBASIC-0.99□□□□□ -2.57
PRKDCP78527 USP9YP23-201ENST00000455085 407 ntBASIC-0.99□□□□□ -2.57
PRKDCP78527 AC018714.1-201ENST00000605028 208 ntBASIC-0.99□□□□□ -2.57
PRKDCP78527 MIR20A-201ENST00000362279 71 ntBASIC-0.99□□□□□ -2.57
PRKDCP78527 RNU6-224P-201ENST00000384055 107 ntBASIC-0.99□□□□□ -2.57
PRKDCP78527 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.99□□□□□ -2.57
PRKDCP78527 RNU7-104P-201ENST00000459398 79 ntBASIC-0.99□□□□□ -2.57
PRKDCP78527 AC245884.10-201ENST00000597355 337 ntBASIC-0.99□□□□□ -2.57
PRKDCP78527 AC109347.2-201ENST00000610220 349 ntBASIC-0.99□□□□□ -2.57
PRKDCP78527 JPX_2.1-201ENST00000614161 69 ntBASIC-0.99□□□□□ -2.57
PRKDCP78527 SNORD115.1-201ENST00000391109 76 ntBASIC-1□□□□□ -2.57
PRKDCP78527 MIR548I3-201ENST00000408378 149 ntBASIC-1□□□□□ -2.57
PRKDCP78527 AC010655.3-201ENST00000478818 450 ntBASIC-1□□□□□ -2.57
PRKDCP78527 RPS29P24-201ENST00000486345 171 ntBASIC-1□□□□□ -2.57
PRKDCP78527 MTCO3P42-201ENST00000509488 518 ntBASIC-1□□□□□ -2.57
PRKDCP78527 MTCO3P39-201ENST00000514812 518 ntBASIC-1□□□□□ -2.57
PRKDCP78527 SNORD115-25-201ENST00000362619 82 ntBASIC-1□□□□□ -2.57
PRKDCP78527 RNU6-179P-201ENST00000363350 107 ntBASIC-1□□□□□ -2.57
PRKDCP78527 RNU6-1125P-201ENST00000363601 107 ntBASIC-1□□□□□ -2.57
PRKDCP78527 Y_RNA.253-201ENST00000364562 112 ntBASIC-1□□□□□ -2.57
PRKDCP78527 RNU6-621P-201ENST00000364752 109 ntBASIC-1□□□□□ -2.57
PRKDCP78527 RNU6-1157P-201ENST00000384456 106 ntBASIC-1□□□□□ -2.57
PRKDCP78527 RNU6-456P-201ENST00000384493 107 ntBASIC-1□□□□□ -2.57
PRKDCP78527 SNORA72.6-201ENST00000384520 129 ntBASIC-1□□□□□ -2.57
PRKDCP78527 RNU6-1114P-201ENST00000516022 107 ntBASIC-1□□□□□ -2.57
PRKDCP78527 RNU7-149P-201ENST00000516739 59 ntBASIC-1□□□□□ -2.57
PRKDCP78527 AC092807.2-201ENST00000609367 243 ntBASIC-1□□□□□ -2.57
PRKDCP78527 Y_RNA.12-201ENST00000362393 112 ntBASIC-1□□□□□ -2.57
PRKDCP78527 RNU6-266P-201ENST00000364225 107 ntBASIC-1□□□□□ -2.57
PRKDCP78527 MIR548I2-201ENST00000408348 149 ntBASIC-1□□□□□ -2.57
PRKDCP78527 AC127459.3-201ENST00000624328 466 ntBASIC-1□□□□□ -2.57
PRKDCP78527 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1□□□□□ -2.57
PRKDCP78527 RNU2-29P-201ENST00000410423 189 ntBASIC-1.01□□□□□ -2.57
PRKDCP78527 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.01□□□□□ -2.57
PRKDCP78527 RNU2-69P-201ENST00000516061 100 ntBASIC-1.01□□□□□ -2.57
PRKDCP78527 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.01□□□□□ -2.57
PRKDCP78527 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.01□□□□□ -2.57
PRKDCP78527 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.01□□□□□ -2.57
PRKDCP78527 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-1.01□□□□□ -2.57
PRKDCP78527 AL391262.2-201ENST00000622466 494 ntBASIC-1.01□□□□□ -2.57
PRKDCP78527 RNA5SP245-201ENST00000364239 121 ntBASIC-1.01□□□□□ -2.57
PRKDCP78527 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.01□□□□□ -2.57
PRKDCP78527 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.01□□□□□ -2.57
PRKDCP78527 RNA5SP237-201ENST00000410414 113 ntBASIC-1.01□□□□□ -2.57
PRKDCP78527 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.01□□□□□ -2.57
PRKDCP78527 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.01□□□□□ -2.57
PRKDCP78527 RNU6-429P-201ENST00000384582 108 ntBASIC-1.02□□□□□ -2.57
PRKDCP78527 RNU6-903P-201ENST00000391270 109 ntBASIC-1.02□□□□□ -2.57
PRKDCP78527 MTND2P18-201ENST00000419962 1030 ntBASIC-1.02□□□□□ -2.57
PRKDCP78527 MTND2P3-201ENST00000452458 470 ntBASIC-1.02□□□□□ -2.57
PRKDCP78527 AL357078.3-201ENST00000607528 618 ntBASIC-1.02□□□□□ -2.57
PRKDCP78527 AP001282.2-201ENST00000616149 309 ntBASIC-1.02□□□□□ -2.57
PRKDCP78527 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.02□□□□□ -2.57
PRKDCP78527 RNU6-865P-201ENST00000364772 107 ntBASIC-1.03□□□□□ -2.57
PRKDCP78527 RNU6-207P-201ENST00000384137 107 ntBASIC-1.03□□□□□ -2.57
PRKDCP78527 AL031667.1-201ENST00000440222 725 ntBASIC-1.03□□□□□ -2.57
PRKDCP78527 AC112204.1-201ENST00000502591 103 ntBASIC-1.03□□□□□ -2.57
PRKDCP78527 SNORA25.10-201ENST00000515926 124 ntBASIC-1.03□□□□□ -2.57
PRKDCP78527 SNORD27.1-201ENST00000516319 72 ntBASIC-1.03□□□□□ -2.57
PRKDCP78527 RNU6-484P-201ENST00000384016 107 ntBASIC-1.03□□□□□ -2.57
PRKDCP78527 MTCO3P40-201ENST00000392516 676 ntBASIC-1.03□□□□□ -2.57
PRKDCP78527 MTCO1P29-201ENST00000496868 288 ntBASIC-1.03□□□□□ -2.57
PRKDCP78527 RNU6-966P-201ENST00000516479 104 ntBASIC-1.03□□□□□ -2.57
PRKDCP78527 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.03□□□□□ -2.57
PRKDCP78527 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1.03□□□□□ -2.57
PRKDCP78527 AL121757.2-201ENST00000611223 313 ntBASIC-1.03□□□□□ -2.57
PRKDCP78527 AC016911.1-201ENST00000613297 452 ntBASIC-1.03□□□□□ -2.57
PRKDCP78527 RNA5SP405-201ENST00000363059 114 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 RNU6-479P-201ENST00000516348 105 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 UBL5P4-201ENST00000562584 236 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 MIR302B-201ENST00000362188 73 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 SNORD74.6-201ENST00000364796 70 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.04□□□□□ -2.58
PRKDCP78527 RNA5SP86-201ENST00000390869 98 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 RNU6-192P-201ENST00000391253 100 ntBASIC-1.04□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms