Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 SNORA38-201ENST00000363946 132 ntBASIC2.57□□□□□ -2
ERVFC1P60507 RNA5SP456-201ENST00000364002 114 ntBASIC2.57□□□□□ -2
ERVFC1P60507 RNU6-820P-201ENST00000384273 107 ntBASIC2.57□□□□□ -2
ERVFC1P60507 Y_RNA.466-201ENST00000384294 113 ntBASIC2.57□□□□□ -2
ERVFC1P60507 MIR1262-201ENST00000408276 93 ntBASIC2.57□□□□□ -2
ERVFC1P60507 HMGN2P3-201ENST00000433603 273 ntBASIC2.57□□□□□ -2
ERVFC1P60507 HMGN2P5-201ENST00000436882 273 ntBASIC2.57□□□□□ -2
ERVFC1P60507 AC026436.1-201ENST00000510537 270 ntBASIC2.57□□□□□ -2
ERVFC1P60507 RNU2-35P-201ENST00000516446 142 ntBASIC2.57□□□□□ -2
ERVFC1P60507 SNORA18.7-201ENST00000516910 131 ntBASIC2.57□□□□□ -2
ERVFC1P60507 AP003327.1-201ENST00000529684 127 ntBASIC2.57□□□□□ -2
ERVFC1P60507 MIR5194-201ENST00000582634 120 ntBASIC2.57□□□□□ -2
ERVFC1P60507 MIR3670-2-201ENST00000582974 65 ntBASIC2.57□□□□□ -2
ERVFC1P60507 MIR3670-1-201ENST00000584160 65 ntBASIC2.57□□□□□ -2
ERVFC1P60507 MIR3670-3-201ENST00000584855 65 ntBASIC2.57□□□□□ -2
ERVFC1P60507 AC078899.2-201ENST00000595282 212 ntBASIC2.57□□□□□ -2
ERVFC1P60507 AC062037.1-201ENST00000605302 128 ntBASIC2.57□□□□□ -2
ERVFC1P60507 SNORD115-40-201ENST00000606510 82 ntBASIC2.57□□□□□ -2
ERVFC1P60507 AC103810.6-201ENST00000606708 136 ntBASIC2.57□□□□□ -2
ERVFC1P60507 MIR3670-4-201ENST00000612260 65 ntBASIC2.57□□□□□ -2
ERVFC1P60507 MALAT1.1-201ENST00000618249 95 ntBASIC2.57□□□□□ -2
ERVFC1P60507 AL596211.1-201ENST00000569873 2277 ntBASIC2.56□□□□□ -2
ERVFC1P60507 RNU6-862P-201ENST00000362804 105 ntBASIC2.56□□□□□ -2
ERVFC1P60507 Y_RNA.265-201ENST00000364677 108 ntBASIC2.56□□□□□ -2
ERVFC1P60507 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.56□□□□□ -2
ERVFC1P60507 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.56□□□□□ -2
ERVFC1P60507 AC141557.1-201ENST00000540982 400 ntBASIC2.56□□□□□ -2
ERVFC1P60507 AC022523.2-201ENST00000561045 150 ntBASIC2.56□□□□□ -2
ERVFC1P60507 MIR4658-201ENST00000584344 65 ntBASIC2.56□□□□□ -2
ERVFC1P60507 AC002984.1-201ENST00000591692 448 ntBASIC2.56□□□□□ -2
ERVFC1P60507 U4atac.1-201ENST00000618345 95 ntBASIC2.56□□□□□ -2
ERVFC1P60507 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ERVFC1P60507 RNY1P7-201ENST00000384743 110 ntBASIC2.55□□□□□ -2
ERVFC1P60507 RNU6-1275P-201ENST00000391087 107 ntBASIC2.55□□□□□ -2
ERVFC1P60507 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.55□□□□□ -2
ERVFC1P60507 AC107297.1-201ENST00000459991 176 ntBASIC2.55□□□□□ -2
ERVFC1P60507 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.55□□□□□ -2
ERVFC1P60507 MIR3169-201ENST00000578032 83 ntBASIC2.55□□□□□ -2
ERVFC1P60507 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.55□□□□□ -2
ERVFC1P60507 AC027279.3-201ENST00000625055 122 ntBASIC2.55□□□□□ -2
ERVFC1P60507 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ERVFC1P60507 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
ERVFC1P60507 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ERVFC1P60507 SNORD114-1-201ENST00000362705 72 ntBASIC2.54□□□□□ -2
ERVFC1P60507 Y_RNA.107-201ENST00000363190 121 ntBASIC2.54□□□□□ -2
ERVFC1P60507 RNA5SP493-201ENST00000364115 91 ntBASIC2.54□□□□□ -2
ERVFC1P60507 RNU1-91P-201ENST00000364746 163 ntBASIC2.54□□□□□ -2
ERVFC1P60507 MIR450A2-201ENST00000385022 100 ntBASIC2.54□□□□□ -2
ERVFC1P60507 AC245047.3-201ENST00000429428 127 ntBASIC2.54□□□□□ -2
ERVFC1P60507 AL606517.2-201ENST00000442855 241 ntBASIC2.54□□□□□ -2
ERVFC1P60507 RPL39P25-201ENST00000449384 154 ntBASIC2.54□□□□□ -2
ERVFC1P60507 DEFB122-202ENST00000569013 197 ntBASIC2.54□□□□□ -2
ERVFC1P60507 AC010297.1-201ENST00000623948 149 ntBASIC2.54□□□□□ -2
ERVFC1P60507 MIR1291-201ENST00000627649 87 ntBASIC2.54□□□□□ -2
ERVFC1P60507 FO624990.1-201ENST00000636373 85 ntBASIC2.54□□□□□ -2
ERVFC1P60507 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
ERVFC1P60507 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.54□□□□□ -2
ERVFC1P60507 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ERVFC1P60507 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ERVFC1P60507 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ERVFC1P60507 AC016717.2-201ENST00000609089 5141 ntBASIC2.53□□□□□ -2
ERVFC1P60507 RNA5SP393-201ENST00000363423 117 ntBASIC2.53□□□□□ -2
ERVFC1P60507 RNU4-36P-201ENST00000364294 144 ntBASIC2.53□□□□□ -2
ERVFC1P60507 Y_RNA.342-201ENST00000365352 113 ntBASIC2.53□□□□□ -2
ERVFC1P60507 SNORD38C-201ENST00000384381 69 ntBASIC2.53□□□□□ -2
ERVFC1P60507 RNU6-1152P-201ENST00000384576 107 ntBASIC2.53□□□□□ -2
ERVFC1P60507 RNU6-816P-201ENST00000390914 107 ntBASIC2.53□□□□□ -2
ERVFC1P60507 RNU6-1268P-201ENST00000391214 107 ntBASIC2.53□□□□□ -2
ERVFC1P60507 RNU6-1239P-201ENST00000391310 107 ntBASIC2.53□□□□□ -2
ERVFC1P60507 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.53□□□□□ -2
ERVFC1P60507 AL035398.1-201ENST00000430869 322 ntBASIC2.53□□□□□ -2
ERVFC1P60507 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.53□□□□□ -2
ERVFC1P60507 SCARNA23-201ENST00000516060 130 ntBASIC2.53□□□□□ -2
ERVFC1P60507 RN7SKP12-201ENST00000516275 143 ntBASIC2.53□□□□□ -2
ERVFC1P60507 DEFB131E-201ENST00000532329 154 ntBASIC2.53□□□□□ -2
ERVFC1P60507 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.53□□□□□ -2
ERVFC1P60507 AC015726.2-201ENST00000620112 122 ntBASIC2.53□□□□□ -2
ERVFC1P60507 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.53□□□□□ -2
ERVFC1P60507 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
ERVFC1P60507 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.52□□□□□ -2.01
ERVFC1P60507 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.52□□□□□ -2.01
ERVFC1P60507 MIRLET7C-201ENST00000362160 84 ntBASIC2.52□□□□□ -2.01
ERVFC1P60507 RNU6-661P-201ENST00000362409 107 ntBASIC2.52□□□□□ -2.01
ERVFC1P60507 SNORD115-19-201ENST00000363098 82 ntBASIC2.52□□□□□ -2.01
ERVFC1P60507 SNORD115-18-201ENST00000363293 82 ntBASIC2.52□□□□□ -2.01
ERVFC1P60507 SNORA63D-201ENST00000364359 132 ntBASIC2.52□□□□□ -2.01
ERVFC1P60507 SNORD115-17-201ENST00000364612 82 ntBASIC2.52□□□□□ -2.01
ERVFC1P60507 RNA5SP173-201ENST00000364857 136 ntBASIC2.52□□□□□ -2.01
ERVFC1P60507 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.52□□□□□ -2.01
ERVFC1P60507 RPS12P2-201ENST00000439728 269 ntBASIC2.52□□□□□ -2.01
ERVFC1P60507 AC108210.2-201ENST00000503681 201 ntBASIC2.52□□□□□ -2.01
ERVFC1P60507 RNU7-6P-201ENST00000516845 62 ntBASIC2.52□□□□□ -2.01
ERVFC1P60507 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.52□□□□□ -2.01
ERVFC1P60507 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.52□□□□□ -2.01
ERVFC1P60507 AC087741.2-201ENST00000619415 172 ntBASIC2.52□□□□□ -2.01
ERVFC1P60507 RNU6-1099P-201ENST00000363533 107 ntBASIC2.51□□□□□ -2.01
ERVFC1P60507 SNORA25.6-201ENST00000364121 118 ntBASIC2.51□□□□□ -2.01
ERVFC1P60507 SNORA27-201ENST00000384323 126 ntBASIC2.51□□□□□ -2.01
ERVFC1P60507 Y_RNA.601-201ENST00000410500 113 ntBASIC2.51□□□□□ -2.01
ERVFC1P60507 RNA5SP144-201ENST00000410846 116 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms