Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MIR1291-201ENST00000627649 87 ntBASIC2.18□□□□□ -2.06
GFRA1P56159 MIR3914-2-201ENST00000637339 95 ntBASIC2.18□□□□□ -2.06
GFRA1P56159 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.17□□□□□ -2.06
GFRA1P56159 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.17□□□□□ -2.06
GFRA1P56159 MIR342-201ENST00000362212 99 ntBASIC2.17□□□□□ -2.06
GFRA1P56159 RNA5SP289-201ENST00000362332 137 ntBASIC2.17□□□□□ -2.06
GFRA1P56159 Y_RNA.370-201ENST00000365589 108 ntBASIC2.17□□□□□ -2.06
GFRA1P56159 RNA5SP508-201ENST00000411327 119 ntBASIC2.17□□□□□ -2.06
GFRA1P56159 AC004965.1-201ENST00000413033 213 ntBASIC2.17□□□□□ -2.06
GFRA1P56159 SNX2P2-201ENST00000424553 323 ntBASIC2.17□□□□□ -2.06
GFRA1P56159 RPS12P2-201ENST00000439728 269 ntBASIC2.17□□□□□ -2.06
GFRA1P56159 RPL23AP6-201ENST00000446637 472 ntBASIC2.17□□□□□ -2.06
GFRA1P56159 RNU7-96P-201ENST00000459535 64 ntBASIC2.17□□□□□ -2.06
GFRA1P56159 RPS29P24-201ENST00000486345 171 ntBASIC2.17□□□□□ -2.06
GFRA1P56159 RPS26P48-201ENST00000491713 339 ntBASIC2.17□□□□□ -2.06
GFRA1P56159 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.17□□□□□ -2.06
GFRA1P56159 DEFB122-202ENST00000569013 197 ntBASIC2.17□□□□□ -2.06
GFRA1P56159 FAM106DP-201ENST00000586416 501 ntBASIC2.17□□□□□ -2.06
GFRA1P56159 AC108081.1-201ENST00000604358 221 ntBASIC2.17□□□□□ -2.06
GFRA1P56159 AC091932.4-201ENST00000623386 200 ntBASIC2.17□□□□□ -2.06
GFRA1P56159 AL596211.1-201ENST00000569873 2277 ntBASIC2.17□□□□□ -2.06
GFRA1P56159 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
GFRA1P56159 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
GFRA1P56159 RNU6-457P-201ENST00000363999 107 ntBASIC2.16□□□□□ -2.06
GFRA1P56159 RNU6-690P-201ENST00000365242 106 ntBASIC2.16□□□□□ -2.06
GFRA1P56159 SNORA70.7-201ENST00000384159 133 ntBASIC2.16□□□□□ -2.06
GFRA1P56159 RNY1P6-201ENST00000384193 109 ntBASIC2.16□□□□□ -2.06
GFRA1P56159 RNU6-301P-201ENST00000384277 107 ntBASIC2.16□□□□□ -2.06
GFRA1P56159 JTBP1-201ENST00000441314 247 ntBASIC2.16□□□□□ -2.06
GFRA1P56159 SNORD123-201ENST00000459473 70 ntBASIC2.16□□□□□ -2.06
GFRA1P56159 AC026436.1-201ENST00000510537 270 ntBASIC2.16□□□□□ -2.06
GFRA1P56159 RNA5SP24-201ENST00000516478 95 ntBASIC2.16□□□□□ -2.06
GFRA1P56159 AC002984.1-201ENST00000591692 448 ntBASIC2.16□□□□□ -2.06
GFRA1P56159 AL049779.4-201ENST00000604500 156 ntBASIC2.16□□□□□ -2.06
GFRA1P56159 AC067747.1-201ENST00000608026 250 ntBASIC2.16□□□□□ -2.06
GFRA1P56159 AL590808.1-201ENST00000618696 141 ntBASIC2.16□□□□□ -2.06
GFRA1P56159 MIR302B-201ENST00000362188 73 ntBASIC2.15□□□□□ -2.07
GFRA1P56159 RNU6-661P-201ENST00000362409 107 ntBASIC2.15□□□□□ -2.07
GFRA1P56159 Y_RNA.353-201ENST00000365440 108 ntBASIC2.15□□□□□ -2.07
GFRA1P56159 DEFA7P-201ENST00000382676 285 ntBASIC2.15□□□□□ -2.07
GFRA1P56159 RNU6-1056P-201ENST00000383996 107 ntBASIC2.15□□□□□ -2.07
GFRA1P56159 SNORA6-201ENST00000384033 151 ntBASIC2.15□□□□□ -2.07
GFRA1P56159 MIR194-1-201ENST00000384892 85 ntBASIC2.15□□□□□ -2.07
GFRA1P56159 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
GFRA1P56159 AL035398.1-201ENST00000430869 322 ntBASIC2.15□□□□□ -2.07
GFRA1P56159 RNU6-998P-201ENST00000515894 101 ntBASIC2.15□□□□□ -2.07
GFRA1P56159 RNU6-240P-201ENST00000516098 97 ntBASIC2.15□□□□□ -2.07
GFRA1P56159 SUMO2P16-201ENST00000519475 264 ntBASIC2.15□□□□□ -2.07
GFRA1P56159 AC046143.2-201ENST00000609789 160 ntBASIC2.15□□□□□ -2.07
GFRA1P56159 AL137067.1-201ENST00000615933 120 ntBASIC2.15□□□□□ -2.07
GFRA1P56159 AC106754.2-201ENST00000623006 233 ntBASIC2.15□□□□□ -2.07
GFRA1P56159 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
GFRA1P56159 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
GFRA1P56159 Y_RNA.346-201ENST00000365385 112 ntBASIC2.14□□□□□ -2.07
GFRA1P56159 Y_RNA.366-201ENST00000365540 102 ntBASIC2.14□□□□□ -2.07
GFRA1P56159 RNU6-1067P-201ENST00000384752 107 ntBASIC2.14□□□□□ -2.07
GFRA1P56159 RN7SL429P-201ENST00000479090 223 ntBASIC2.14□□□□□ -2.07
GFRA1P56159 RN7SL489P-201ENST00000486185 223 ntBASIC2.14□□□□□ -2.07
GFRA1P56159 RN7SL327P-201ENST00000488659 223 ntBASIC2.14□□□□□ -2.07
GFRA1P56159 RNU6-781P-201ENST00000516377 101 ntBASIC2.14□□□□□ -2.07
GFRA1P56159 AC022254.1-201ENST00000567857 235 ntBASIC2.14□□□□□ -2.07
GFRA1P56159 MIR4713-201ENST00000582691 75 ntBASIC2.14□□□□□ -2.07
GFRA1P56159 AC025166.1-201ENST00000612411 163 ntBASIC2.14□□□□□ -2.07
GFRA1P56159 RN7SL853P-201ENST00000617250 223 ntBASIC2.14□□□□□ -2.07
GFRA1P56159 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
GFRA1P56159 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
GFRA1P56159 AC080100.1-201ENST00000624239 5356 ntBASIC2.13□□□□□ -2.07
GFRA1P56159 AP000648.3-201ENST00000623539 4507 ntBASIC2.13□□□□□ -2.07
GFRA1P56159 RNU6-439P-201ENST00000384188 106 ntBASIC2.13□□□□□ -2.07
GFRA1P56159 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
GFRA1P56159 RNU6-1064P-201ENST00000410626 104 ntBASIC2.13□□□□□ -2.07
GFRA1P56159 RNU4-53P-201ENST00000410828 140 ntBASIC2.13□□□□□ -2.07
GFRA1P56159 UBL5P3-201ENST00000475112 231 ntBASIC2.13□□□□□ -2.07
GFRA1P56159 AC008413.1-201ENST00000511864 177 ntBASIC2.13□□□□□ -2.07
GFRA1P56159 RNU6-322P-201ENST00000516010 103 ntBASIC2.13□□□□□ -2.07
GFRA1P56159 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
GFRA1P56159 SNORD53-201ENST00000579969 78 ntBASIC2.13□□□□□ -2.07
GFRA1P56159 MIR4298-201ENST00000584380 73 ntBASIC2.13□□□□□ -2.07
GFRA1P56159 AC005336.3-201ENST00000623833 2679 ntBASIC2.12□□□□□ -2.07
GFRA1P56159 MIR6073-201ENST00000352083 89 ntBASIC2.12□□□□□ -2.07
GFRA1P56159 RNU6-349P-201ENST00000362402 107 ntBASIC2.12□□□□□ -2.07
GFRA1P56159 RNA5SP259-201ENST00000365541 109 ntBASIC2.12□□□□□ -2.07
GFRA1P56159 Y_RNA.494-201ENST00000384432 111 ntBASIC2.12□□□□□ -2.07
GFRA1P56159 MIR17-201ENST00000385012 84 ntBASIC2.12□□□□□ -2.07
GFRA1P56159 MIR513A1-201ENST00000385138 129 ntBASIC2.12□□□□□ -2.07
GFRA1P56159 MIR1263-201ENST00000408324 86 ntBASIC2.12□□□□□ -2.07
GFRA1P56159 RNA5SP181-201ENST00000410246 98 ntBASIC2.12□□□□□ -2.07
GFRA1P56159 RNA5SP136-201ENST00000410906 107 ntBASIC2.12□□□□□ -2.07
GFRA1P56159 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.12□□□□□ -2.07
GFRA1P56159 SNORA74.3-201ENST00000517108 154 ntBASIC2.12□□□□□ -2.07
GFRA1P56159 MIR4299-201ENST00000577899 72 ntBASIC2.12□□□□□ -2.07
GFRA1P56159 MIR5007-201ENST00000583098 95 ntBASIC2.12□□□□□ -2.07
GFRA1P56159 AC064859.1-201ENST00000624741 174 ntBASIC2.12□□□□□ -2.07
GFRA1P56159 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
GFRA1P56159 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
GFRA1P56159 RNU6-476P-201ENST00000384726 107 ntBASIC2.11□□□□□ -2.07
GFRA1P56159 Y_RNA.630-201ENST00000411370 108 ntBASIC2.11□□□□□ -2.07
GFRA1P56159 AL161935.2-201ENST00000414627 60 ntBASIC2.11□□□□□ -2.07
GFRA1P56159 RNU7-67P-201ENST00000459003 62 ntBASIC2.11□□□□□ -2.07
GFRA1P56159 RNU2-11P-201ENST00000459191 187 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms