Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 CYCSP49-201ENST00000420810 319 ntBASIC1.81□□□□□ -2.12
COPB1P53618 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.81□□□□□ -2.12
COPB1P53618 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.81□□□□□ -2.12
COPB1P53618 MIR378A-201ENST00000362177 66 ntBASIC1.8□□□□□ -2.12
COPB1P53618 RNU6-833P-201ENST00000363486 107 ntBASIC1.8□□□□□ -2.12
COPB1P53618 RNY1P11-201ENST00000363759 113 ntBASIC1.8□□□□□ -2.12
COPB1P53618 RNU6-1082P-201ENST00000364574 107 ntBASIC1.8□□□□□ -2.12
COPB1P53618 SNORD50.2-201ENST00000365465 70 ntBASIC1.8□□□□□ -2.12
COPB1P53618 MIR569-201ENST00000385228 96 ntBASIC1.8□□□□□ -2.12
COPB1P53618 RNU7-197P-201ENST00000458836 62 ntBASIC1.8□□□□□ -2.12
COPB1P53618 RNU7-34P-201ENST00000459394 64 ntBASIC1.8□□□□□ -2.12
COPB1P53618 AL513423.1-201ENST00000621695 132 ntBASIC1.8□□□□□ -2.12
COPB1P53618 MIR6844-201ENST00000637122 62 ntBASIC1.8□□□□□ -2.12
COPB1P53618 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
COPB1P53618 RNU6-1336P-201ENST00000383886 109 ntBASIC1.79□□□□□ -2.12
COPB1P53618 SNORA1-201ENST00000384107 130 ntBASIC1.79□□□□□ -2.12
COPB1P53618 RNU6-163P-201ENST00000384396 106 ntBASIC1.79□□□□□ -2.12
COPB1P53618 Y_RNA.488-201ENST00000384403 102 ntBASIC1.79□□□□□ -2.12
COPB1P53618 MIR194-1-201ENST00000384892 85 ntBASIC1.79□□□□□ -2.12
COPB1P53618 MIR518F-201ENST00000384973 87 ntBASIC1.79□□□□□ -2.12
COPB1P53618 RNU6-588P-201ENST00000410281 105 ntBASIC1.79□□□□□ -2.12
COPB1P53618 AC244636.1-201ENST00000421152 228 ntBASIC1.79□□□□□ -2.12
COPB1P53618 SNRPGP13-201ENST00000442212 177 ntBASIC1.79□□□□□ -2.12
COPB1P53618 HMGN2P32-201ENST00000444648 269 ntBASIC1.79□□□□□ -2.12
COPB1P53618 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.79□□□□□ -2.12
COPB1P53618 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.79□□□□□ -2.12
COPB1P53618 MIR548X2-201ENST00000579776 100 ntBASIC1.79□□□□□ -2.12
COPB1P53618 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.79□□□□□ -2.12
COPB1P53618 AL365205.2-201ENST00000594586 68 ntBASIC1.79□□□□□ -2.12
COPB1P53618 MIR8081-201ENST00000611533 95 ntBASIC1.79□□□□□ -2.12
COPB1P53618 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.79□□□□□ -2.12
COPB1P53618 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.79□□□□□ -2.12
COPB1P53618 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
COPB1P53618 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
COPB1P53618 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.78□□□□□ -2.12
COPB1P53618 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
COPB1P53618 MIR424-201ENST00000362227 98 ntBASIC1.78□□□□□ -2.12
COPB1P53618 Y_RNA.251-201ENST00000364551 99 ntBASIC1.78□□□□□ -2.12
COPB1P53618 RNU6-203P-201ENST00000384038 104 ntBASIC1.78□□□□□ -2.12
COPB1P53618 MIR660-201ENST00000385235 97 ntBASIC1.78□□□□□ -2.12
COPB1P53618 MIR613-201ENST00000385248 95 ntBASIC1.78□□□□□ -2.12
COPB1P53618 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
COPB1P53618 SNORA75.5-201ENST00000391291 81 ntBASIC1.78□□□□□ -2.12
COPB1P53618 RNU4-61P-201ENST00000411243 107 ntBASIC1.78□□□□□ -2.12
COPB1P53618 AL161935.2-201ENST00000414627 60 ntBASIC1.78□□□□□ -2.12
COPB1P53618 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.78□□□□□ -2.12
COPB1P53618 AC108667.1-201ENST00000428618 249 ntBASIC1.78□□□□□ -2.12
COPB1P53618 RNA5SP57-201ENST00000459463 123 ntBASIC1.78□□□□□ -2.12
COPB1P53618 RNU6-693P-201ENST00000516134 107 ntBASIC1.78□□□□□ -2.12
COPB1P53618 RNU6-250P-201ENST00000516958 103 ntBASIC1.78□□□□□ -2.12
COPB1P53618 AC112693.2-201ENST00000556538 232 ntBASIC1.78□□□□□ -2.12
COPB1P53618 snoU13.31-201ENST00000607291 104 ntBASIC1.78□□□□□ -2.12
COPB1P53618 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
COPB1P53618 RNU6-704P-201ENST00000364162 103 ntBASIC1.77□□□□□ -2.13
COPB1P53618 SNORA25.7-201ENST00000364375 127 ntBASIC1.77□□□□□ -2.13
COPB1P53618 RNA5SP190-201ENST00000365222 118 ntBASIC1.77□□□□□ -2.13
COPB1P53618 Y_RNA.568-201ENST00000384742 113 ntBASIC1.77□□□□□ -2.13
COPB1P53618 MIR891A-201ENST00000401237 79 ntBASIC1.77□□□□□ -2.13
COPB1P53618 PGBD4P5-201ENST00000445958 426 ntBASIC1.77□□□□□ -2.13
COPB1P53618 AC092991.1-201ENST00000477176 376 ntBASIC1.77□□□□□ -2.13
COPB1P53618 RNU7-12P-201ENST00000516030 62 ntBASIC1.77□□□□□ -2.13
COPB1P53618 RNU6-1270P-201ENST00000517128 108 ntBASIC1.77□□□□□ -2.13
COPB1P53618 AC090142.3-201ENST00000519012 385 ntBASIC1.77□□□□□ -2.13
COPB1P53618 MIR4299-201ENST00000577899 72 ntBASIC1.77□□□□□ -2.13
COPB1P53618 Y_RNA.542-201ENST00000384641 111 ntBASIC1.76□□□□□ -2.13
COPB1P53618 Y_RNA.547-201ENST00000384654 119 ntBASIC1.76□□□□□ -2.13
COPB1P53618 MIR802-201ENST00000390235 94 ntBASIC1.76□□□□□ -2.13
COPB1P53618 SNORD37.2-201ENST00000391075 66 ntBASIC1.76□□□□□ -2.13
COPB1P53618 MIR548O-201ENST00000408583 114 ntBASIC1.76□□□□□ -2.13
COPB1P53618 AC093850.1-201ENST00000454121 251 ntBASIC1.76□□□□□ -2.13
COPB1P53618 RNU6-830P-201ENST00000516353 107 ntBASIC1.76□□□□□ -2.13
COPB1P53618 RNU6-426P-201ENST00000516464 97 ntBASIC1.76□□□□□ -2.13
COPB1P53618 RNU6-406P-201ENST00000516470 107 ntBASIC1.76□□□□□ -2.13
COPB1P53618 RNU7-25P-201ENST00000516544 62 ntBASIC1.76□□□□□ -2.13
COPB1P53618 MIR3910-1-201ENST00000580936 111 ntBASIC1.76□□□□□ -2.13
COPB1P53618 AC095038.3-201ENST00000634439 195 ntBASIC1.76□□□□□ -2.13
COPB1P53618 RNU6-199P-201ENST00000362954 107 ntBASIC1.75□□□□□ -2.13
COPB1P53618 RNU6-1292P-201ENST00000383856 107 ntBASIC1.75□□□□□ -2.13
COPB1P53618 RNU6-439P-201ENST00000384188 106 ntBASIC1.75□□□□□ -2.13
COPB1P53618 MIR624-201ENST00000385217 97 ntBASIC1.75□□□□□ -2.13
COPB1P53618 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
COPB1P53618 SNORD77.3-201ENST00000391113 65 ntBASIC1.75□□□□□ -2.13
COPB1P53618 AF228730.3-201ENST00000436691 102 ntBASIC1.75□□□□□ -2.13
COPB1P53618 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.75□□□□□ -2.13
COPB1P53618 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
COPB1P53618 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.74□□□□□ -2.13
COPB1P53618 Y_RNA.497-201ENST00000384447 98 ntBASIC1.74□□□□□ -2.13
COPB1P53618 AC015922.2-201ENST00000435593 184 ntBASIC1.74□□□□□ -2.13
COPB1P53618 RPL23AP6-201ENST00000446637 472 ntBASIC1.74□□□□□ -2.13
COPB1P53618 RNA5SP272-201ENST00000516095 111 ntBASIC1.74□□□□□ -2.13
COPB1P53618 SNORA25.12-201ENST00000516202 82 ntBASIC1.74□□□□□ -2.13
COPB1P53618 MIR3683-201ENST00000580847 82 ntBASIC1.74□□□□□ -2.13
COPB1P53618 MIR3129-201ENST00000581095 76 ntBASIC1.74□□□□□ -2.13
COPB1P53618 MIR4713-201ENST00000582691 75 ntBASIC1.74□□□□□ -2.13
COPB1P53618 MIR4781-201ENST00000585250 76 ntBASIC1.74□□□□□ -2.13
COPB1P53618 SNORD3E-202ENST00000627253 216 ntBASIC1.74□□□□□ -2.13
COPB1P53618 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
COPB1P53618 RNU6-1123P-201ENST00000362347 106 ntBASIC1.73□□□□□ -2.13
COPB1P53618 RNU6-661P-201ENST00000362409 107 ntBASIC1.73□□□□□ -2.13
COPB1P53618 Y_RNA.343-201ENST00000365354 112 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms