Protein–RNA interactions for Protein: P48378

RFX2, DNA-binding protein RFX2, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2P48378 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.57□□□□□ -2.16
RFX2P48378 MIR4299-201ENST00000577899 72 ntBASIC1.57□□□□□ -2.16
RFX2P48378 MIR3618-201ENST00000580330 88 ntBASIC1.57□□□□□ -2.16
RFX2P48378 AC134878.1-201ENST00000619901 243 ntBASIC1.57□□□□□ -2.16
RFX2P48378 AP001340.1-201ENST00000624405 217 ntBASIC1.57□□□□□ -2.16
RFX2P48378 MIR219B-201ENST00000637023 88 ntBASIC1.57□□□□□ -2.16
RFX2P48378 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.56□□□□□ -2.16
RFX2P48378 MIR424-201ENST00000362227 98 ntBASIC1.56□□□□□ -2.16
RFX2P48378 RNU6-457P-201ENST00000363999 107 ntBASIC1.56□□□□□ -2.16
RFX2P48378 SNORD113-1-201ENST00000365321 69 ntBASIC1.56□□□□□ -2.16
RFX2P48378 RNU6-1292P-201ENST00000383856 107 ntBASIC1.56□□□□□ -2.16
RFX2P48378 MIR526A1-201ENST00000384897 85 ntBASIC1.56□□□□□ -2.16
RFX2P48378 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RFX2P48378 RNU6-938P-201ENST00000411285 103 ntBASIC1.56□□□□□ -2.16
RFX2P48378 AC244636.1-201ENST00000421152 228 ntBASIC1.56□□□□□ -2.16
RFX2P48378 RPL23AP42-201ENST00000471152 471 ntBASIC1.56□□□□□ -2.16
RFX2P48378 RNU5E-3P-201ENST00000515913 68 ntBASIC1.56□□□□□ -2.16
RFX2P48378 RNU4-57P-201ENST00000515980 135 ntBASIC1.56□□□□□ -2.16
RFX2P48378 RNU6-1149P-201ENST00000516810 97 ntBASIC1.56□□□□□ -2.16
RFX2P48378 SUMO2P16-201ENST00000519475 264 ntBASIC1.56□□□□□ -2.16
RFX2P48378 AC106754.2-201ENST00000623006 233 ntBASIC1.56□□□□□ -2.16
RFX2P48378 MTND5P32-201ENST00000560711 1802 ntBASIC1.56□□□□□ -2.16
RFX2P48378 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
RFX2P48378 Y_RNA.120-201ENST00000363304 110 ntBASIC1.55□□□□□ -2.16
RFX2P48378 Y_RNA.218-201ENST00000364218 104 ntBASIC1.55□□□□□ -2.16
RFX2P48378 RNU6-309P-201ENST00000364573 106 ntBASIC1.55□□□□□ -2.16
RFX2P48378 SNORD18B-201ENST00000365659 72 ntBASIC1.55□□□□□ -2.16
RFX2P48378 Y_RNA.510-201ENST00000384511 114 ntBASIC1.55□□□□□ -2.16
RFX2P48378 MIR452-201ENST00000385020 85 ntBASIC1.55□□□□□ -2.16
RFX2P48378 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.55□□□□□ -2.16
RFX2P48378 AL445685.2-201ENST00000422551 342 ntBASIC1.55□□□□□ -2.16
RFX2P48378 RPL23AP6-201ENST00000446637 472 ntBASIC1.55□□□□□ -2.16
RFX2P48378 Y_RNA.690-201ENST00000516603 95 ntBASIC1.55□□□□□ -2.16
RFX2P48378 RNU6-1234P-201ENST00000516877 103 ntBASIC1.55□□□□□ -2.16
RFX2P48378 RNU7-181P-201ENST00000517234 74 ntBASIC1.55□□□□□ -2.16
RFX2P48378 AP003484.1-201ENST00000530974 250 ntBASIC1.55□□□□□ -2.16
RFX2P48378 MIR5197-201ENST00000583721 112 ntBASIC1.55□□□□□ -2.16
RFX2P48378 TUG1_4.1-201ENST00000619464 181 ntBASIC1.55□□□□□ -2.16
RFX2P48378 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RFX2P48378 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RFX2P48378 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RFX2P48378 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
RFX2P48378 RNU6-414P-201ENST00000363705 104 ntBASIC1.54□□□□□ -2.16
RFX2P48378 RNU6-1189P-201ENST00000383958 107 ntBASIC1.54□□□□□ -2.16
RFX2P48378 Y_RNA.410-201ENST00000383992 113 ntBASIC1.54□□□□□ -2.16
RFX2P48378 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.54□□□□□ -2.16
RFX2P48378 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.54□□□□□ -2.16
RFX2P48378 AC022254.1-201ENST00000567857 235 ntBASIC1.54□□□□□ -2.16
RFX2P48378 U7.2-201ENST00000607576 63 ntBASIC1.54□□□□□ -2.16
RFX2P48378 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RFX2P48378 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.54□□□□□ -2.16
RFX2P48378 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.54□□□□□ -2.16
RFX2P48378 AL442644.1-201ENST00000454390 3105 ntBASIC1.53□□□□□ -2.16
RFX2P48378 SNORA2.2-201ENST00000365473 135 ntBASIC1.53□□□□□ -2.16
RFX2P48378 RNU6-1117P-201ENST00000384525 104 ntBASIC1.53□□□□□ -2.16
RFX2P48378 MIR194-1-201ENST00000384892 85 ntBASIC1.53□□□□□ -2.16
RFX2P48378 MIR136-201ENST00000385207 82 ntBASIC1.53□□□□□ -2.16
RFX2P48378 AC004965.1-201ENST00000413033 213 ntBASIC1.53□□□□□ -2.16
RFX2P48378 AL356320.1-201ENST00000429616 163 ntBASIC1.53□□□□□ -2.16
RFX2P48378 SCARNA15-202ENST00000516881 127 ntBASIC1.53□□□□□ -2.16
RFX2P48378 SNORA18.7-201ENST00000516910 131 ntBASIC1.53□□□□□ -2.16
RFX2P48378 MIR4435-1-201ENST00000582552 80 ntBASIC1.53□□□□□ -2.16
RFX2P48378 FAM106DP-201ENST00000586416 501 ntBASIC1.53□□□□□ -2.16
RFX2P48378 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.53□□□□□ -2.16
RFX2P48378 ZNF355P-201ENST00000427301 3216 ntBASIC1.52□□□□□ -2.17
RFX2P48378 RNU6-1123P-201ENST00000362347 106 ntBASIC1.52□□□□□ -2.17
RFX2P48378 RNU6-235P-201ENST00000362644 107 ntBASIC1.52□□□□□ -2.17
RFX2P48378 Y_RNA.71-201ENST00000362892 104 ntBASIC1.52□□□□□ -2.17
RFX2P48378 Y_RNA.241-201ENST00000364470 117 ntBASIC1.52□□□□□ -2.17
RFX2P48378 MIR539-201ENST00000365690 78 ntBASIC1.52□□□□□ -2.17
RFX2P48378 Y_RNA.494-201ENST00000384432 111 ntBASIC1.52□□□□□ -2.17
RFX2P48378 U8.17-201ENST00000391292 132 ntBASIC1.52□□□□□ -2.17
RFX2P48378 AL603914.1-201ENST00000401964 204 ntBASIC1.52□□□□□ -2.17
RFX2P48378 RNA5SP508-201ENST00000411327 119 ntBASIC1.52□□□□□ -2.17
RFX2P48378 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.52□□□□□ -2.17
RFX2P48378 JTBP1-201ENST00000441314 247 ntBASIC1.52□□□□□ -2.17
RFX2P48378 AC087499.4-201ENST00000448505 178 ntBASIC1.52□□□□□ -2.17
RFX2P48378 RNA5SP236-201ENST00000516169 116 ntBASIC1.52□□□□□ -2.17
RFX2P48378 RNU6-830P-201ENST00000516353 107 ntBASIC1.52□□□□□ -2.17
RFX2P48378 Y_RNA.692-201ENST00000516627 105 ntBASIC1.52□□□□□ -2.17
RFX2P48378 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
RFX2P48378 MIR4713-201ENST00000582691 75 ntBASIC1.52□□□□□ -2.17
RFX2P48378 AL365222.1-201ENST00000614661 98 ntBASIC1.52□□□□□ -2.17
RFX2P48378 MIR342-201ENST00000362212 99 ntBASIC1.51□□□□□ -2.17
RFX2P48378 RNA5SP259-201ENST00000365541 109 ntBASIC1.51□□□□□ -2.17
RFX2P48378 Y_RNA.440-201ENST00000384120 114 ntBASIC1.51□□□□□ -2.17
RFX2P48378 RNU6-22P-201ENST00000384355 107 ntBASIC1.51□□□□□ -2.17
RFX2P48378 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
RFX2P48378 MIR1267-201ENST00000408723 78 ntBASIC1.51□□□□□ -2.17
RFX2P48378 SNX2P2-201ENST00000424553 323 ntBASIC1.51□□□□□ -2.17
RFX2P48378 Y_RNA.757-201ENST00000578934 114 ntBASIC1.51□□□□□ -2.17
RFX2P48378 AL022345.2-201ENST00000606307 135 ntBASIC1.51□□□□□ -2.17
RFX2P48378 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
RFX2P48378 RNU6-661P-201ENST00000362409 107 ntBASIC1.5□□□□□ -2.17
RFX2P48378 Y_RNA.261-201ENST00000364631 102 ntBASIC1.5□□□□□ -2.17
RFX2P48378 Y_RNA.525-201ENST00000384570 113 ntBASIC1.5□□□□□ -2.17
RFX2P48378 MIR513A1-201ENST00000385138 129 ntBASIC1.5□□□□□ -2.17
RFX2P48378 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
RFX2P48378 MIR548I2-201ENST00000408348 149 ntBASIC1.5□□□□□ -2.17
RFX2P48378 AL161935.2-201ENST00000414627 60 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms