Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RNU4-57P-201ENST00000515980 135 ntBASIC1.21□□□□□ -2.22
NKX2-1P43699 RN7SKP88-201ENST00000516847 250 ntBASIC1.21□□□□□ -2.22
NKX2-1P43699 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.21□□□□□ -2.22
NKX2-1P43699 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
NKX2-1P43699 MIR3683-201ENST00000580847 82 ntBASIC1.21□□□□□ -2.22
NKX2-1P43699 7SK.8-201ENST00000612110 250 ntBASIC1.21□□□□□ -2.22
NKX2-1P43699 7SK.11-201ENST00000615477 250 ntBASIC1.21□□□□□ -2.22
NKX2-1P43699 MIR7974-201ENST00000615835 79 ntBASIC1.21□□□□□ -2.22
NKX2-1P43699 7SK.13-201ENST00000622040 250 ntBASIC1.21□□□□□ -2.22
NKX2-1P43699 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
NKX2-1P43699 Y_RNA.441-201ENST00000384123 112 ntBASIC1.2□□□□□ -2.22
NKX2-1P43699 MIR548A2-201ENST00000384956 97 ntBASIC1.2□□□□□ -2.22
NKX2-1P43699 RNU6-493P-201ENST00000391321 108 ntBASIC1.2□□□□□ -2.22
NKX2-1P43699 RNA5SP61-201ENST00000516453 100 ntBASIC1.2□□□□□ -2.22
NKX2-1P43699 RNU7-43P-201ENST00000516554 64 ntBASIC1.2□□□□□ -2.22
NKX2-1P43699 SNORA81.3-201ENST00000517283 198 ntBASIC1.2□□□□□ -2.22
NKX2-1P43699 CYP3A52P-201ENST00000563326 91 ntBASIC1.2□□□□□ -2.22
NKX2-1P43699 MIR4431-201ENST00000579990 94 ntBASIC1.2□□□□□ -2.22
NKX2-1P43699 MIR3124-201ENST00000582636 67 ntBASIC1.2□□□□□ -2.22
NKX2-1P43699 RNU6-923P-201ENST00000364753 107 ntBASIC1.19□□□□□ -2.22
NKX2-1P43699 RNU6-1292P-201ENST00000383856 107 ntBASIC1.19□□□□□ -2.22
NKX2-1P43699 RNU6-47P-201ENST00000383866 107 ntBASIC1.19□□□□□ -2.22
NKX2-1P43699 Y_RNA.410-201ENST00000383992 113 ntBASIC1.19□□□□□ -2.22
NKX2-1P43699 Y_RNA.542-201ENST00000384641 111 ntBASIC1.19□□□□□ -2.22
NKX2-1P43699 MIR517C-201ENST00000385103 95 ntBASIC1.19□□□□□ -2.22
NKX2-1P43699 CYCSP49-201ENST00000420810 319 ntBASIC1.19□□□□□ -2.22
NKX2-1P43699 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.19□□□□□ -2.22
NKX2-1P43699 Y_RNA.797-201ENST00000515977 94 ntBASIC1.19□□□□□ -2.22
NKX2-1P43699 AL365205.2-201ENST00000594586 68 ntBASIC1.19□□□□□ -2.22
NKX2-1P43699 AC004792.1-201ENST00000614523 137 ntBASIC1.19□□□□□ -2.22
NKX2-1P43699 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
NKX2-1P43699 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
NKX2-1P43699 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
NKX2-1P43699 SNORA1.2-201ENST00000365189 134 ntBASIC1.18□□□□□ -2.22
NKX2-1P43699 RNU6-597P-201ENST00000365620 102 ntBASIC1.18□□□□□ -2.22
NKX2-1P43699 SNORD61-201ENST00000384252 73 ntBASIC1.18□□□□□ -2.22
NKX2-1P43699 Y_RNA.547-201ENST00000384654 119 ntBASIC1.18□□□□□ -2.22
NKX2-1P43699 MIR802-201ENST00000390235 94 ntBASIC1.18□□□□□ -2.22
NKX2-1P43699 SNORA79-201ENST00000408376 140 ntBASIC1.18□□□□□ -2.22
NKX2-1P43699 Y_RNA.793-201ENST00000411222 111 ntBASIC1.18□□□□□ -2.22
NKX2-1P43699 RNU6-561P-201ENST00000516222 102 ntBASIC1.18□□□□□ -2.22
NKX2-1P43699 RNU7-121P-201ENST00000516604 62 ntBASIC1.18□□□□□ -2.22
NKX2-1P43699 RNU6-922P-201ENST00000516753 99 ntBASIC1.18□□□□□ -2.22
NKX2-1P43699 RNU6-182P-201ENST00000516970 105 ntBASIC1.18□□□□□ -2.22
NKX2-1P43699 RNU6-165P-201ENST00000517170 99 ntBASIC1.18□□□□□ -2.22
NKX2-1P43699 AC007751.1-201ENST00000529260 376 ntBASIC1.18□□□□□ -2.22
NKX2-1P43699 FAM106DP-201ENST00000586416 501 ntBASIC1.18□□□□□ -2.22
NKX2-1P43699 RNU2-4P-201ENST00000606190 192 ntBASIC1.18□□□□□ -2.22
NKX2-1P43699 AC134878.1-201ENST00000619901 243 ntBASIC1.18□□□□□ -2.22
NKX2-1P43699 MIR7843-201ENST00000622274 79 ntBASIC1.18□□□□□ -2.22
NKX2-1P43699 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.18□□□□□ -2.22
NKX2-1P43699 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.18□□□□□ -2.22
NKX2-1P43699 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
NKX2-1P43699 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
NKX2-1P43699 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.17□□□□□ -2.22
NKX2-1P43699 MIR26B-201ENST00000362251 77 ntBASIC1.17□□□□□ -2.22
NKX2-1P43699 Y_RNA.182-201ENST00000363880 111 ntBASIC1.17□□□□□ -2.22
NKX2-1P43699 RNU6-978P-201ENST00000364371 103 ntBASIC1.17□□□□□ -2.22
NKX2-1P43699 Y_RNA.412-201ENST00000384001 104 ntBASIC1.17□□□□□ -2.22
NKX2-1P43699 SNORA24-201ENST00000384096 131 ntBASIC1.17□□□□□ -2.22
NKX2-1P43699 Y_RNA.537-201ENST00000384626 109 ntBASIC1.17□□□□□ -2.22
NKX2-1P43699 MIR518F-201ENST00000384973 87 ntBASIC1.17□□□□□ -2.22
NKX2-1P43699 U8.17-201ENST00000391292 132 ntBASIC1.17□□□□□ -2.22
NKX2-1P43699 RNU2-70P-201ENST00000410718 179 ntBASIC1.17□□□□□ -2.22
NKX2-1P43699 RNU6-1135P-201ENST00000411083 103 ntBASIC1.17□□□□□ -2.22
NKX2-1P43699 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.17□□□□□ -2.22
NKX2-1P43699 RPL39P39-201ENST00000455840 151 ntBASIC1.17□□□□□ -2.22
NKX2-1P43699 SNORD123-201ENST00000459473 70 ntBASIC1.17□□□□□ -2.22
NKX2-1P43699 AP002392.1-201ENST00000537692 208 ntBASIC1.17□□□□□ -2.22
NKX2-1P43699 SNORD53B-201ENST00000577887 78 ntBASIC1.17□□□□□ -2.22
NKX2-1P43699 MIR378D2-201ENST00000580636 98 ntBASIC1.17□□□□□ -2.22
NKX2-1P43699 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.16□□□□□ -2.22
NKX2-1P43699 SNORD115-28-201ENST00000363931 81 ntBASIC1.16□□□□□ -2.22
NKX2-1P43699 Y_RNA.370-201ENST00000365589 108 ntBASIC1.16□□□□□ -2.22
NKX2-1P43699 RNU6-643P-201ENST00000384018 107 ntBASIC1.16□□□□□ -2.22
NKX2-1P43699 RNU6-1067P-201ENST00000384752 107 ntBASIC1.16□□□□□ -2.22
NKX2-1P43699 SNORA40.5-201ENST00000391061 128 ntBASIC1.16□□□□□ -2.22
NKX2-1P43699 MIR548O-201ENST00000408583 114 ntBASIC1.16□□□□□ -2.22
NKX2-1P43699 AL133373.1-201ENST00000497098 94 ntBASIC1.16□□□□□ -2.22
NKX2-1P43699 Y_RNA.666-201ENST00000516187 112 ntBASIC1.16□□□□□ -2.22
NKX2-1P43699 AP003716.2-201ENST00000528260 108 ntBASIC1.16□□□□□ -2.22
NKX2-1P43699 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.16□□□□□ -2.22
NKX2-1P43699 FTX_2.1-201ENST00000618816 94 ntBASIC1.16□□□□□ -2.22
NKX2-1P43699 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.16□□□□□ -2.22
NKX2-1P43699 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
NKX2-1P43699 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.16□□□□□ -2.22
NKX2-1P43699 SNORD115-34-201ENST00000362441 82 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD115-12-201ENST00000362583 82 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD115-29-201ENST00000362834 82 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD115-9-201ENST00000362912 82 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD115-21-201ENST00000362963 81 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 Y_RNA.91-201ENST00000363042 107 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD115-14-201ENST00000363090 81 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD115-13-201ENST00000363358 82 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD115-41-201ENST00000363608 82 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD115-11-201ENST00000363616 82 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD115-5-201ENST00000363633 82 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD115-39-201ENST00000363694 82 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 SNORD115-4-201ENST00000363810 82 ntBASIC1.15□□□□□ -2.23
NKX2-1P43699 RNU6-682P-201ENST00000363843 106 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms