Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC109810.1-201ENST00000534066 224 ntBASIC1.47□□□□□ -2.17
PTPN9P43378 FAM106DP-201ENST00000586416 501 ntBASIC1.47□□□□□ -2.17
PTPN9P43378 AC108706.1-201ENST00000611053 297 ntBASIC1.47□□□□□ -2.17
PTPN9P43378 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
PTPN9P43378 AL121890.5-201ENST00000620848 304 ntBASIC1.47□□□□□ -2.17
PTPN9P43378 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
PTPN9P43378 Y_RNA.140-201ENST00000363474 103 ntBASIC1.46□□□□□ -2.18
PTPN9P43378 SNORD45.3-201ENST00000363836 72 ntBASIC1.46□□□□□ -2.18
PTPN9P43378 SNRPGP13-201ENST00000442212 177 ntBASIC1.46□□□□□ -2.18
PTPN9P43378 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.46□□□□□ -2.18
PTPN9P43378 RNU6-138P-201ENST00000515952 107 ntBASIC1.46□□□□□ -2.18
PTPN9P43378 RNU6-504P-201ENST00000516568 104 ntBASIC1.46□□□□□ -2.18
PTPN9P43378 AC019176.1-201ENST00000518519 225 ntBASIC1.46□□□□□ -2.18
PTPN9P43378 AP000942.3-201ENST00000603702 160 ntBASIC1.46□□□□□ -2.18
PTPN9P43378 AC072026.1-201ENST00000605023 201 ntBASIC1.46□□□□□ -2.18
PTPN9P43378 RNU2-4P-201ENST00000606190 192 ntBASIC1.46□□□□□ -2.18
PTPN9P43378 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PTPN9P43378 RNU6-888P-201ENST00000363010 101 ntBASIC1.45□□□□□ -2.18
PTPN9P43378 Y_RNA.634-201ENST00000364811 113 ntBASIC1.45□□□□□ -2.18
PTPN9P43378 RNU6-275P-201ENST00000364910 107 ntBASIC1.45□□□□□ -2.18
PTPN9P43378 SNORA79-201ENST00000408376 140 ntBASIC1.45□□□□□ -2.18
PTPN9P43378 AC108667.1-201ENST00000428618 249 ntBASIC1.45□□□□□ -2.18
PTPN9P43378 Y_RNA.797-201ENST00000515977 94 ntBASIC1.45□□□□□ -2.18
PTPN9P43378 RNA5SP458-201ENST00000516188 119 ntBASIC1.45□□□□□ -2.18
PTPN9P43378 RNA5SP61-201ENST00000516453 100 ntBASIC1.45□□□□□ -2.18
PTPN9P43378 SNORA74.3-201ENST00000517108 154 ntBASIC1.45□□□□□ -2.18
PTPN9P43378 MRPS18CP4-201ENST00000535821 231 ntBASIC1.45□□□□□ -2.18
PTPN9P43378 AL512310.8-201ENST00000550183 120 ntBASIC1.45□□□□□ -2.18
PTPN9P43378 MIR3664-201ENST00000579074 99 ntBASIC1.45□□□□□ -2.18
PTPN9P43378 AL512598.1-201ENST00000610158 273 ntBASIC1.45□□□□□ -2.18
PTPN9P43378 AL161722.3-201ENST00000605789 2983 ntBASIC1.44□□□□□ -2.18
PTPN9P43378 RNA5SP432-201ENST00000362480 116 ntBASIC1.44□□□□□ -2.18
PTPN9P43378 Y_RNA.29-201ENST00000362570 113 ntBASIC1.44□□□□□ -2.18
PTPN9P43378 Y_RNA.66-201ENST00000362862 102 ntBASIC1.44□□□□□ -2.18
PTPN9P43378 MIR516B2-201ENST00000385190 85 ntBASIC1.44□□□□□ -2.18
PTPN9P43378 MIR548O-201ENST00000408583 114 ntBASIC1.44□□□□□ -2.18
PTPN9P43378 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
PTPN9P43378 RNU2-70P-201ENST00000410718 179 ntBASIC1.44□□□□□ -2.18
PTPN9P43378 RNU7-43P-201ENST00000516554 64 ntBASIC1.44□□□□□ -2.18
PTPN9P43378 RNU6-922P-201ENST00000516753 99 ntBASIC1.44□□□□□ -2.18
PTPN9P43378 ZNF209P-201ENST00000593450 2304 ntBASIC1.43□□□□□ -2.18
PTPN9P43378 Y_RNA.182-201ENST00000363880 111 ntBASIC1.43□□□□□ -2.18
PTPN9P43378 Y_RNA.233-201ENST00000364407 101 ntBASIC1.43□□□□□ -2.18
PTPN9P43378 RNU6-1318P-201ENST00000365389 103 ntBASIC1.43□□□□□ -2.18
PTPN9P43378 Y_RNA.622-201ENST00000411091 108 ntBASIC1.43□□□□□ -2.18
PTPN9P43378 Y_RNA.793-201ENST00000411222 111 ntBASIC1.43□□□□□ -2.18
PTPN9P43378 RNU7-120P-201ENST00000459334 63 ntBASIC1.43□□□□□ -2.18
PTPN9P43378 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.43□□□□□ -2.18
PTPN9P43378 RNU4-57P-201ENST00000515980 135 ntBASIC1.43□□□□□ -2.18
PTPN9P43378 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.43□□□□□ -2.18
PTPN9P43378 Y_RNA.23-201ENST00000362496 106 ntBASIC1.42□□□□□ -2.18
PTPN9P43378 RNU6-312P-201ENST00000364629 107 ntBASIC1.42□□□□□ -2.18
PTPN9P43378 SNORA1.2-201ENST00000365189 134 ntBASIC1.42□□□□□ -2.18
PTPN9P43378 RNU6-47P-201ENST00000383866 107 ntBASIC1.42□□□□□ -2.18
PTPN9P43378 Y_RNA.547-201ENST00000384654 119 ntBASIC1.42□□□□□ -2.18
PTPN9P43378 MIR150-201ENST00000385048 84 ntBASIC1.42□□□□□ -2.18
PTPN9P43378 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.42□□□□□ -2.18
PTPN9P43378 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
PTPN9P43378 RNU4-62P-201ENST00000410125 130 ntBASIC1.42□□□□□ -2.18
PTPN9P43378 AC087499.4-201ENST00000448505 178 ntBASIC1.42□□□□□ -2.18
PTPN9P43378 SNORD123-201ENST00000459473 70 ntBASIC1.42□□□□□ -2.18
PTPN9P43378 Y_RNA.666-201ENST00000516187 112 ntBASIC1.42□□□□□ -2.18
PTPN9P43378 SNORA81.3-201ENST00000517283 198 ntBASIC1.42□□□□□ -2.18
PTPN9P43378 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.42□□□□□ -2.18
PTPN9P43378 MIR378A-201ENST00000362177 66 ntBASIC1.41□□□□□ -2.18
PTPN9P43378 Y_RNA.412-201ENST00000384001 104 ntBASIC1.41□□□□□ -2.18
PTPN9P43378 MIR758-201ENST00000390227 88 ntBASIC1.41□□□□□ -2.18
PTPN9P43378 AC108059.2-201ENST00000434626 151 ntBASIC1.41□□□□□ -2.18
PTPN9P43378 AL121914.1-201ENST00000450188 156 ntBASIC1.41□□□□□ -2.18
PTPN9P43378 AC005840.1-201ENST00000498412 377 ntBASIC1.41□□□□□ -2.18
PTPN9P43378 RNU6-561P-201ENST00000516222 102 ntBASIC1.41□□□□□ -2.18
PTPN9P43378 RNU7-25P-201ENST00000516544 62 ntBASIC1.41□□□□□ -2.18
PTPN9P43378 RNU1-92P-201ENST00000517017 135 ntBASIC1.41□□□□□ -2.18
PTPN9P43378 AP002392.1-201ENST00000537692 208 ntBASIC1.41□□□□□ -2.18
PTPN9P43378 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.41□□□□□ -2.18
PTPN9P43378 MIR7974-201ENST00000615835 79 ntBASIC1.41□□□□□ -2.18
PTPN9P43378 AC015726.2-201ENST00000620112 122 ntBASIC1.41□□□□□ -2.18
PTPN9P43378 Y_RNA.91-201ENST00000363042 107 ntBASIC1.4□□□□□ -2.19
PTPN9P43378 SNORD115-28-201ENST00000363931 81 ntBASIC1.4□□□□□ -2.19
PTPN9P43378 SNORD61-201ENST00000384252 73 ntBASIC1.4□□□□□ -2.19
PTPN9P43378 MIR548A2-201ENST00000384956 97 ntBASIC1.4□□□□□ -2.19
PTPN9P43378 MIR518F-201ENST00000384973 87 ntBASIC1.4□□□□□ -2.19
PTPN9P43378 U8.17-201ENST00000391292 132 ntBASIC1.4□□□□□ -2.19
PTPN9P43378 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.4□□□□□ -2.19
PTPN9P43378 RPL39P39-201ENST00000455840 151 ntBASIC1.4□□□□□ -2.19
PTPN9P43378 RPS29P23-201ENST00000458635 123 ntBASIC1.4□□□□□ -2.19
PTPN9P43378 RNU6-693P-201ENST00000516134 107 ntBASIC1.4□□□□□ -2.19
PTPN9P43378 SNORD111.1-201ENST00000516421 86 ntBASIC1.4□□□□□ -2.19
PTPN9P43378 DNAJC19P9-201ENST00000555084 351 ntBASIC1.4□□□□□ -2.19
PTPN9P43378 MIR4431-201ENST00000579990 94 ntBASIC1.4□□□□□ -2.19
PTPN9P43378 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
PTPN9P43378 RNU6-643P-201ENST00000384018 107 ntBASIC1.39□□□□□ -2.19
PTPN9P43378 Y_RNA.542-201ENST00000384641 111 ntBASIC1.39□□□□□ -2.19
PTPN9P43378 SNORA18.7-201ENST00000516910 131 ntBASIC1.39□□□□□ -2.19
PTPN9P43378 RNU6-165P-201ENST00000517170 99 ntBASIC1.39□□□□□ -2.19
PTPN9P43378 AC007751.1-201ENST00000529260 376 ntBASIC1.39□□□□□ -2.19
PTPN9P43378 AC134878.1-201ENST00000619901 243 ntBASIC1.39□□□□□ -2.19
PTPN9P43378 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.39□□□□□ -2.19
PTPN9P43378 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.39□□□□□ -2.19
PTPN9P43378 U6.106-201ENST00000636360 105 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms