Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 RNU6-1007P-201ENST00000516586 107 ntBASIC1.57□□□□□ -2.16
KRT9P35527 RNU7-116P-201ENST00000516940 62 ntBASIC1.57□□□□□ -2.16
KRT9P35527 SNORA31.24-201ENST00000517232 57 ntBASIC1.57□□□□□ -2.16
KRT9P35527 MIR4431-201ENST00000579990 94 ntBASIC1.57□□□□□ -2.16
KRT9P35527 POLR3GP1-201ENST00000594073 261 ntBASIC1.57□□□□□ -2.16
KRT9P35527 MIR548AY-201ENST00000617669 107 ntBASIC1.57□□□□□ -2.16
KRT9P35527 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
KRT9P35527 Y_RNA.400-201ENST00000383963 111 ntBASIC1.56□□□□□ -2.16
KRT9P35527 RNU6-1323P-201ENST00000384025 107 ntBASIC1.56□□□□□ -2.16
KRT9P35527 SNORD26-201ENST00000384147 75 ntBASIC1.56□□□□□ -2.16
KRT9P35527 Y_RNA.488-201ENST00000384403 102 ntBASIC1.56□□□□□ -2.16
KRT9P35527 RNU6-239P-201ENST00000390990 99 ntBASIC1.56□□□□□ -2.16
KRT9P35527 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.56□□□□□ -2.16
KRT9P35527 RPL30P13-201ENST00000418873 348 ntBASIC1.56□□□□□ -2.16
KRT9P35527 AL121914.1-201ENST00000450188 156 ntBASIC1.56□□□□□ -2.16
KRT9P35527 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.56□□□□□ -2.16
KRT9P35527 MIR3664-201ENST00000579074 99 ntBASIC1.56□□□□□ -2.16
KRT9P35527 AL645939.4-201ENST00000604495 135 ntBASIC1.56□□□□□ -2.16
KRT9P35527 AL391903.3-201ENST00000612158 163 ntBASIC1.56□□□□□ -2.16
KRT9P35527 AC068700.1-201ENST00000565862 3754 ntBASIC1.55□□□□□ -2.16
KRT9P35527 MIRLET7C-201ENST00000362160 84 ntBASIC1.55□□□□□ -2.16
KRT9P35527 RNU6-151P-201ENST00000364158 107 ntBASIC1.55□□□□□ -2.16
KRT9P35527 RNU6-1080P-201ENST00000383982 107 ntBASIC1.55□□□□□ -2.16
KRT9P35527 Y_RNA.497-201ENST00000384447 98 ntBASIC1.55□□□□□ -2.16
KRT9P35527 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
KRT9P35527 RNU6-1228P-201ENST00000391014 107 ntBASIC1.55□□□□□ -2.16
KRT9P35527 RNU6-955P-201ENST00000410497 104 ntBASIC1.55□□□□□ -2.16
KRT9P35527 RNU6-383P-201ENST00000410864 94 ntBASIC1.55□□□□□ -2.16
KRT9P35527 Y_RNA.621-201ENST00000411065 96 ntBASIC1.55□□□□□ -2.16
KRT9P35527 AC093850.1-201ENST00000454121 251 ntBASIC1.55□□□□□ -2.16
KRT9P35527 RPL23AP54-201ENST00000495129 419 ntBASIC1.55□□□□□ -2.16
KRT9P35527 AC107027.2-201ENST00000512197 115 ntBASIC1.55□□□□□ -2.16
KRT9P35527 SCARNA8-201ENST00000515924 131 ntBASIC1.55□□□□□ -2.16
KRT9P35527 RNU7-12P-201ENST00000516030 62 ntBASIC1.55□□□□□ -2.16
KRT9P35527 RNU6-453P-201ENST00000516819 85 ntBASIC1.55□□□□□ -2.16
KRT9P35527 AC109810.1-201ENST00000534066 224 ntBASIC1.55□□□□□ -2.16
KRT9P35527 DNAJC19P9-201ENST00000555084 351 ntBASIC1.55□□□□□ -2.16
KRT9P35527 MIR548AI-201ENST00000579940 88 ntBASIC1.55□□□□□ -2.16
KRT9P35527 AP003357.1-201ENST00000604497 148 ntBASIC1.55□□□□□ -2.16
KRT9P35527 snoU13.31-201ENST00000607291 104 ntBASIC1.55□□□□□ -2.16
KRT9P35527 MIR7974-201ENST00000615835 79 ntBASIC1.55□□□□□ -2.16
KRT9P35527 AC091895.1-201ENST00000624494 256 ntBASIC1.55□□□□□ -2.16
KRT9P35527 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.55□□□□□ -2.16
KRT9P35527 AL161722.3-201ENST00000605789 2983 ntBASIC1.54□□□□□ -2.16
KRT9P35527 Y_RNA.215-201ENST00000364204 112 ntBASIC1.54□□□□□ -2.16
KRT9P35527 Y_RNA.229-201ENST00000364347 113 ntBASIC1.54□□□□□ -2.16
KRT9P35527 Y_RNA.337-201ENST00000365312 102 ntBASIC1.54□□□□□ -2.16
KRT9P35527 RNU6-728P-201ENST00000365375 104 ntBASIC1.54□□□□□ -2.16
KRT9P35527 AL606845.1-201ENST00000404881 255 ntBASIC1.54□□□□□ -2.16
KRT9P35527 MIR548I2-201ENST00000408348 149 ntBASIC1.54□□□□□ -2.16
KRT9P35527 RNU6-321P-201ENST00000410912 106 ntBASIC1.54□□□□□ -2.16
KRT9P35527 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.54□□□□□ -2.16
KRT9P35527 SNRPGP13-201ENST00000442212 177 ntBASIC1.54□□□□□ -2.16
KRT9P35527 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.54□□□□□ -2.16
KRT9P35527 RPS29P23-201ENST00000458635 123 ntBASIC1.54□□□□□ -2.16
KRT9P35527 RNU6-922P-201ENST00000516753 99 ntBASIC1.54□□□□□ -2.16
KRT9P35527 RN7SKP88-201ENST00000516847 250 ntBASIC1.54□□□□□ -2.16
KRT9P35527 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.54□□□□□ -2.16
KRT9P35527 7SK.8-201ENST00000612110 250 ntBASIC1.54□□□□□ -2.16
KRT9P35527 7SK.11-201ENST00000615477 250 ntBASIC1.54□□□□□ -2.16
KRT9P35527 Y_RNA.778-201ENST00000620203 90 ntBASIC1.54□□□□□ -2.16
KRT9P35527 7SK.13-201ENST00000622040 250 ntBASIC1.54□□□□□ -2.16
KRT9P35527 MT-TT-201ENST00000387460 66 ntBASIC1.53□□□□□ -2.16
KRT9P35527 AC006461.1-201ENST00000412637 326 ntBASIC1.53□□□□□ -2.16
KRT9P35527 RNU6-437P-201ENST00000459408 95 ntBASIC1.53□□□□□ -2.16
KRT9P35527 SNORD116-25-201ENST00000516517 92 ntBASIC1.53□□□□□ -2.16
KRT9P35527 RNU7-121P-201ENST00000516604 62 ntBASIC1.53□□□□□ -2.16
KRT9P35527 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.53□□□□□ -2.16
KRT9P35527 AC011604.1-201ENST00000545978 196 ntBASIC1.53□□□□□ -2.16
KRT9P35527 AC127455.1-201ENST00000565496 145 ntBASIC1.53□□□□□ -2.16
KRT9P35527 AL513534.2-201ENST00000603836 250 ntBASIC1.53□□□□□ -2.16
KRT9P35527 MIR8070-201ENST00000616510 88 ntBASIC1.53□□□□□ -2.16
KRT9P35527 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.53□□□□□ -2.16
KRT9P35527 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
KRT9P35527 U8.1-201ENST00000362843 134 ntBASIC1.52□□□□□ -2.17
KRT9P35527 Y_RNA.355-201ENST00000365462 98 ntBASIC1.52□□□□□ -2.17
KRT9P35527 RNU6-81P-201ENST00000365608 104 ntBASIC1.52□□□□□ -2.17
KRT9P35527 RNY3P5-201ENST00000384127 102 ntBASIC1.52□□□□□ -2.17
KRT9P35527 MIR15B-201ENST00000385045 98 ntBASIC1.52□□□□□ -2.17
KRT9P35527 RNA5SP496-201ENST00000391240 109 ntBASIC1.52□□□□□ -2.17
KRT9P35527 MIR513C-201ENST00000401352 84 ntBASIC1.52□□□□□ -2.17
KRT9P35527 SNORA79-201ENST00000408376 140 ntBASIC1.52□□□□□ -2.17
KRT9P35527 AC023449.1-201ENST00000454464 154 ntBASIC1.52□□□□□ -2.17
KRT9P35527 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.52□□□□□ -2.17
KRT9P35527 TRMT112P2-201ENST00000512910 132 ntBASIC1.52□□□□□ -2.17
KRT9P35527 AL160236.1-201ENST00000556317 195 ntBASIC1.52□□□□□ -2.17
KRT9P35527 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.52□□□□□ -2.17
KRT9P35527 MIR548X2-201ENST00000579776 100 ntBASIC1.52□□□□□ -2.17
KRT9P35527 DNAJC19P2-201ENST00000593340 302 ntBASIC1.52□□□□□ -2.17
KRT9P35527 SNORD68-201ENST00000363214 84 ntBASIC1.51□□□□□ -2.17
KRT9P35527 RNU6-674P-201ENST00000363831 107 ntBASIC1.51□□□□□ -2.17
KRT9P35527 Y_RNA.291-201ENST00000364886 113 ntBASIC1.51□□□□□ -2.17
KRT9P35527 RNU4-11P-201ENST00000365287 132 ntBASIC1.51□□□□□ -2.17
KRT9P35527 SNORD113-1-201ENST00000365321 69 ntBASIC1.51□□□□□ -2.17
KRT9P35527 SNORA72-201ENST00000384339 132 ntBASIC1.51□□□□□ -2.17
KRT9P35527 Y_RNA.508-201ENST00000384502 114 ntBASIC1.51□□□□□ -2.17
KRT9P35527 RNU6-1081P-201ENST00000384537 107 ntBASIC1.51□□□□□ -2.17
KRT9P35527 Y_RNA.521-201ENST00000384560 114 ntBASIC1.51□□□□□ -2.17
KRT9P35527 Y_RNA.568-201ENST00000384742 113 ntBASIC1.51□□□□□ -2.17
KRT9P35527 MIR653-201ENST00000385279 96 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms