Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 AC244636.1-201ENST00000421152 228 ntBASIC1.96□□□□□ -2.1
PTPN7P35236 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
PTPN7P35236 RN7SL274P-201ENST00000492268 272 ntBASIC1.96□□□□□ -2.1
PTPN7P35236 RNA5SP236-201ENST00000516169 116 ntBASIC1.96□□□□□ -2.1
PTPN7P35236 SNORD36C-201ENST00000516733 66 ntBASIC1.96□□□□□ -2.1
PTPN7P35236 RNA5SP364-201ENST00000516938 78 ntBASIC1.96□□□□□ -2.1
PTPN7P35236 MIR4778-201ENST00000577635 80 ntBASIC1.96□□□□□ -2.1
PTPN7P35236 SNORD3E-202ENST00000627253 216 ntBASIC1.96□□□□□ -2.1
PTPN7P35236 AC095038.3-201ENST00000634439 195 ntBASIC1.96□□□□□ -2.1
PTPN7P35236 MTND5P32-201ENST00000560711 1802 ntBASIC1.96□□□□□ -2.1
PTPN7P35236 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
PTPN7P35236 ICE2P2-201ENST00000483823 2787 ntBASIC1.95□□□□□ -2.1
PTPN7P35236 MIR539-201ENST00000365690 78 ntBASIC1.95□□□□□ -2.1
PTPN7P35236 RNU6-1189P-201ENST00000383958 107 ntBASIC1.95□□□□□ -2.1
PTPN7P35236 RNU6-22P-201ENST00000384355 107 ntBASIC1.95□□□□□ -2.1
PTPN7P35236 MIR526A1-201ENST00000384897 85 ntBASIC1.95□□□□□ -2.1
PTPN7P35236 MIR452-201ENST00000385020 85 ntBASIC1.95□□□□□ -2.1
PTPN7P35236 RN7SKP192-201ENST00000411291 327 ntBASIC1.95□□□□□ -2.1
PTPN7P35236 AC087499.4-201ENST00000448505 178 ntBASIC1.95□□□□□ -2.1
PTPN7P35236 RNA5SP233-201ENST00000459153 113 ntBASIC1.95□□□□□ -2.1
PTPN7P35236 RNU6-1211P-201ENST00000459179 105 ntBASIC1.95□□□□□ -2.1
PTPN7P35236 UBE2DNL-203ENST00000474922 222 ntBASIC1.95□□□□□ -2.1
PTPN7P35236 MIR3121-201ENST00000579680 77 ntBASIC1.95□□□□□ -2.1
PTPN7P35236 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.95□□□□□ -2.1
PTPN7P35236 AC011603.4-201ENST00000611325 277 ntBASIC1.95□□□□□ -2.1
PTPN7P35236 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.95□□□□□ -2.1
PTPN7P35236 RNU6-1123P-201ENST00000362347 106 ntBASIC1.94□□□□□ -2.1
PTPN7P35236 RNU6-309P-201ENST00000364573 106 ntBASIC1.94□□□□□ -2.1
PTPN7P35236 Y_RNA.280-201ENST00000364765 112 ntBASIC1.94□□□□□ -2.1
PTPN7P35236 RNU6-439P-201ENST00000384188 106 ntBASIC1.94□□□□□ -2.1
PTPN7P35236 MIR634-201ENST00000385208 97 ntBASIC1.94□□□□□ -2.1
PTPN7P35236 AL356379.1-201ENST00000414105 126 ntBASIC1.94□□□□□ -2.1
PTPN7P35236 HMGN2P19-201ENST00000425149 265 ntBASIC1.94□□□□□ -2.1
PTPN7P35236 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.94□□□□□ -2.1
PTPN7P35236 RNU6-1149P-201ENST00000516810 97 ntBASIC1.94□□□□□ -2.1
PTPN7P35236 uc_338.20-201ENST00000621563 178 ntBASIC1.94□□□□□ -2.1
PTPN7P35236 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
PTPN7P35236 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
PTPN7P35236 Y_RNA.71-201ENST00000362892 104 ntBASIC1.93□□□□□ -2.1
PTPN7P35236 RNU6-457P-201ENST00000363999 107 ntBASIC1.93□□□□□ -2.1
PTPN7P35236 Y_RNA.294-201ENST00000364916 102 ntBASIC1.93□□□□□ -2.1
PTPN7P35236 Y_RNA.440-201ENST00000384120 114 ntBASIC1.93□□□□□ -2.1
PTPN7P35236 MIR516B2-201ENST00000385190 85 ntBASIC1.93□□□□□ -2.1
PTPN7P35236 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
PTPN7P35236 AC004965.1-201ENST00000413033 213 ntBASIC1.93□□□□□ -2.1
PTPN7P35236 Y_RNA.690-201ENST00000516603 95 ntBASIC1.93□□□□□ -2.1
PTPN7P35236 Y_RNA.692-201ENST00000516627 105 ntBASIC1.93□□□□□ -2.1
PTPN7P35236 AP003484.1-201ENST00000530974 250 ntBASIC1.93□□□□□ -2.1
PTPN7P35236 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.93□□□□□ -2.1
PTPN7P35236 SNORA16.1-201ENST00000364597 132 ntBASIC1.92□□□□□ -2.1
PTPN7P35236 SNORD18B-201ENST00000365659 72 ntBASIC1.92□□□□□ -2.1
PTPN7P35236 MIR136-201ENST00000385207 82 ntBASIC1.92□□□□□ -2.1
PTPN7P35236 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.92□□□□□ -2.1
PTPN7P35236 Y_RNA.651-201ENST00000459380 103 ntBASIC1.92□□□□□ -2.1
PTPN7P35236 RNU6-1234P-201ENST00000516877 103 ntBASIC1.92□□□□□ -2.1
PTPN7P35236 MIR4299-201ENST00000577899 72 ntBASIC1.92□□□□□ -2.1
PTPN7P35236 AL365222.1-201ENST00000614661 98 ntBASIC1.92□□□□□ -2.1
PTPN7P35236 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.92□□□□□ -2.1
PTPN7P35236 RNU6-661P-201ENST00000362409 107 ntBASIC1.91□□□□□ -2.1
PTPN7P35236 Y_RNA.291-201ENST00000364886 113 ntBASIC1.91□□□□□ -2.1
PTPN7P35236 RNU6-80P-201ENST00000384195 107 ntBASIC1.91□□□□□ -2.1
PTPN7P35236 U8.17-201ENST00000391292 132 ntBASIC1.91□□□□□ -2.1
PTPN7P35236 JTBP1-201ENST00000441314 247 ntBASIC1.91□□□□□ -2.1
PTPN7P35236 RNU6-479P-201ENST00000516348 105 ntBASIC1.91□□□□□ -2.1
PTPN7P35236 MIR514B-201ENST00000516774 80 ntBASIC1.91□□□□□ -2.1
PTPN7P35236 MIR4713-201ENST00000582691 75 ntBASIC1.91□□□□□ -2.1
PTPN7P35236 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
PTPN7P35236 SNORA2.2-201ENST00000365473 135 ntBASIC1.9□□□□□ -2.11
PTPN7P35236 Y_RNA.494-201ENST00000384432 111 ntBASIC1.9□□□□□ -2.11
PTPN7P35236 RNU6-1168P-201ENST00000390831 104 ntBASIC1.9□□□□□ -2.11
PTPN7P35236 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.9□□□□□ -2.11
PTPN7P35236 MTATP6P21-201ENST00000440681 189 ntBASIC1.9□□□□□ -2.11
PTPN7P35236 RNU6-62P-201ENST00000516526 102 ntBASIC1.9□□□□□ -2.11
PTPN7P35236 RNU7-181P-201ENST00000517234 74 ntBASIC1.9□□□□□ -2.11
PTPN7P35236 SUMO2P16-201ENST00000519475 264 ntBASIC1.9□□□□□ -2.11
PTPN7P35236 SNORA77B-201ENST00000578179 125 ntBASIC1.9□□□□□ -2.11
PTPN7P35236 Y_RNA.757-201ENST00000578934 114 ntBASIC1.9□□□□□ -2.11
PTPN7P35236 AL022345.2-201ENST00000606307 135 ntBASIC1.9□□□□□ -2.11
PTPN7P35236 AL627230.6-201ENST00000611129 280 ntBASIC1.9□□□□□ -2.11
PTPN7P35236 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
PTPN7P35236 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.89□□□□□ -2.11
PTPN7P35236 Y_RNA.114-201ENST00000363265 113 ntBASIC1.89□□□□□ -2.11
PTPN7P35236 Y_RNA.127-201ENST00000363386 109 ntBASIC1.89□□□□□ -2.11
PTPN7P35236 RNU6-414P-201ENST00000363705 104 ntBASIC1.89□□□□□ -2.11
PTPN7P35236 SNORD116-14-201ENST00000383894 92 ntBASIC1.89□□□□□ -2.11
PTPN7P35236 SNORD116-17-201ENST00000383929 92 ntBASIC1.89□□□□□ -2.11
PTPN7P35236 SNORD116-15-201ENST00000384445 92 ntBASIC1.89□□□□□ -2.11
PTPN7P35236 SNORD116-19-201ENST00000384729 92 ntBASIC1.89□□□□□ -2.11
PTPN7P35236 MIR23A-201ENST00000385245 73 ntBASIC1.89□□□□□ -2.11
PTPN7P35236 SNORA40.5-201ENST00000391061 128 ntBASIC1.89□□□□□ -2.11
PTPN7P35236 RPL23AP6-201ENST00000446637 472 ntBASIC1.89□□□□□ -2.11
PTPN7P35236 RPS26P48-201ENST00000491713 339 ntBASIC1.89□□□□□ -2.11
PTPN7P35236 RNU6-917P-201ENST00000516294 104 ntBASIC1.89□□□□□ -2.11
PTPN7P35236 MIR4435-1-201ENST00000582552 80 ntBASIC1.89□□□□□ -2.11
PTPN7P35236 SNORD115-34-201ENST00000362441 82 ntBASIC1.88□□□□□ -2.11
PTPN7P35236 SNORD115-12-201ENST00000362583 82 ntBASIC1.88□□□□□ -2.11
PTPN7P35236 SNORD115-29-201ENST00000362834 82 ntBASIC1.88□□□□□ -2.11
PTPN7P35236 SNORD115-9-201ENST00000362912 82 ntBASIC1.88□□□□□ -2.11
PTPN7P35236 SNORD115-21-201ENST00000362963 81 ntBASIC1.88□□□□□ -2.11
PTPN7P35236 SNORD115-14-201ENST00000363090 81 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms