Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 RNU6-47P-201ENST00000383866 107 ntBASIC-1.08□□□□□ -2.58
SDC4P31431 SNORA27-201ENST00000384323 126 ntBASIC-1.08□□□□□ -2.58
SDC4P31431 SNORA40.5-201ENST00000391061 128 ntBASIC-1.08□□□□□ -2.58
SDC4P31431 MIR548I3-201ENST00000408378 149 ntBASIC-1.08□□□□□ -2.58
SDC4P31431 SNORD12B-201ENST00000410433 91 ntBASIC-1.08□□□□□ -2.58
SDC4P31431 SNORD11-201ENST00000459124 84 ntBASIC-1.08□□□□□ -2.58
SDC4P31431 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.08□□□□□ -2.58
SDC4P31431 RNU6-261P-201ENST00000459506 102 ntBASIC-1.08□□□□□ -2.58
SDC4P31431 AL356055.1-201ENST00000602528 446 ntBASIC-1.08□□□□□ -2.58
SDC4P31431 AC018462.2-201ENST00000605375 395 ntBASIC-1.08□□□□□ -2.58
SDC4P31431 RNA5SP403-201ENST00000363598 108 ntBASIC-1.09□□□□□ -2.58
SDC4P31431 RNU4-50P-201ENST00000364361 141 ntBASIC-1.09□□□□□ -2.58
SDC4P31431 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.09□□□□□ -2.58
SDC4P31431 MIR514A2-201ENST00000385131 88 ntBASIC-1.09□□□□□ -2.58
SDC4P31431 MIR514A3-201ENST00000385132 88 ntBASIC-1.09□□□□□ -2.58
SDC4P31431 SNORA26.6-201ENST00000391256 115 ntBASIC-1.09□□□□□ -2.58
SDC4P31431 Z95118.1-201ENST00000421372 247 ntBASIC-1.09□□□□□ -2.58
SDC4P31431 MTATP6P17-201ENST00000431030 672 ntBASIC-1.09□□□□□ -2.58
SDC4P31431 MTND3P21-201ENST00000433774 331 ntBASIC-1.09□□□□□ -2.58
SDC4P31431 RNU6-531P-201ENST00000516694 104 ntBASIC-1.09□□□□□ -2.58
SDC4P31431 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.09□□□□□ -2.58
SDC4P31431 MRPS36P3-201ENST00000519284 130 ntBASIC-1.09□□□□□ -2.58
SDC4P31431 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.09□□□□□ -2.58
SDC4P31431 AP003357.1-201ENST00000604497 148 ntBASIC-1.09□□□□□ -2.58
SDC4P31431 AC108676.2-201ENST00000605225 163 ntBASIC-1.09□□□□□ -2.58
SDC4P31431 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.1□□□□□ -2.59
SDC4P31431 MIR196A1-201ENST00000388006 70 ntBASIC-1.1□□□□□ -2.59
SDC4P31431 AL590004.1-201ENST00000405321 300 ntBASIC-1.1□□□□□ -2.59
SDC4P31431 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.1□□□□□ -2.59
SDC4P31431 AC244505.6-201ENST00000452829 130 ntBASIC-1.1□□□□□ -2.59
SDC4P31431 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.1□□□□□ -2.59
SDC4P31431 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.1□□□□□ -2.59
SDC4P31431 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.1□□□□□ -2.59
SDC4P31431 SNORD36C-201ENST00000516733 66 ntBASIC-1.1□□□□□ -2.59
SDC4P31431 RNU7-116P-201ENST00000516940 62 ntBASIC-1.1□□□□□ -2.59
SDC4P31431 AC127455.1-201ENST00000565496 145 ntBASIC-1.1□□□□□ -2.59
SDC4P31431 MIR3681-201ENST00000580089 72 ntBASIC-1.1□□□□□ -2.59
SDC4P31431 AC245884.10-201ENST00000597355 337 ntBASIC-1.1□□□□□ -2.59
SDC4P31431 MIR6717-201ENST00000622747 73 ntBASIC-1.1□□□□□ -2.59
SDC4P31431 AC091931.1-201ENST00000623488 728 ntBASIC-1.1□□□□□ -2.59
SDC4P31431 MTND5P32-201ENST00000560711 1802 ntBASIC-1.1□□□□□ -2.59
SDC4P31431 MT-TQ-201ENST00000387372 72 ntBASIC-1.11□□□□□ -2.59
SDC4P31431 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.11□□□□□ -2.59
SDC4P31431 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.11□□□□□ -2.59
SDC4P31431 RNU6-155P-201ENST00000516347 100 ntBASIC-1.11□□□□□ -2.59
SDC4P31431 ZNF519P2-201ENST00000557032 169 ntBASIC-1.11□□□□□ -2.59
SDC4P31431 MIR5701-3-201ENST00000578890 82 ntBASIC-1.11□□□□□ -2.59
SDC4P31431 MIR5701-1-201ENST00000585138 82 ntBASIC-1.11□□□□□ -2.59
SDC4P31431 AL360085.1-201ENST00000604713 532 ntBASIC-1.11□□□□□ -2.59
SDC4P31431 MIR5701-2-201ENST00000615634 82 ntBASIC-1.11□□□□□ -2.59
SDC4P31431 AC007494.3-201ENST00000624660 743 ntBASIC-1.11□□□□□ -2.59
SDC4P31431 FGF7P2-201ENST00000332473 296 ntBASIC-1.12□□□□□ -2.59
SDC4P31431 SNORD115-28-201ENST00000363931 81 ntBASIC-1.12□□□□□ -2.59
SDC4P31431 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.12□□□□□ -2.59
SDC4P31431 Y_RNA.446-201ENST00000384178 104 ntBASIC-1.12□□□□□ -2.59
SDC4P31431 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.12□□□□□ -2.59
SDC4P31431 MIR9-2-201ENST00000384838 87 ntBASIC-1.12□□□□□ -2.59
SDC4P31431 RNU4-55P-201ENST00000410731 137 ntBASIC-1.12□□□□□ -2.59
SDC4P31431 AF228730.4-201ENST00000421457 183 ntBASIC-1.12□□□□□ -2.59
SDC4P31431 AC074198.2-201ENST00000508153 258 ntBASIC-1.12□□□□□ -2.59
SDC4P31431 RNU7-115P-201ENST00000516433 55 ntBASIC-1.12□□□□□ -2.59
SDC4P31431 MIR4473-201ENST00000583731 91 ntBASIC-1.12□□□□□ -2.59
SDC4P31431 AC097520.1-201ENST00000624435 385 ntBASIC-1.12□□□□□ -2.59
SDC4P31431 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.13□□□□□ -2.59
SDC4P31431 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.13□□□□□ -2.59
SDC4P31431 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.13□□□□□ -2.59
SDC4P31431 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.13□□□□□ -2.59
SDC4P31431 RNU6-949P-201ENST00000384040 107 ntBASIC-1.13□□□□□ -2.59
SDC4P31431 RNU6-842P-201ENST00000384269 107 ntBASIC-1.13□□□□□ -2.59
SDC4P31431 MIR204-201ENST00000385200 110 ntBASIC-1.13□□□□□ -2.59
SDC4P31431 SNORD77.3-201ENST00000391113 65 ntBASIC-1.13□□□□□ -2.59
SDC4P31431 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.13□□□□□ -2.59
SDC4P31431 RNU6-759P-201ENST00000516740 103 ntBASIC-1.13□□□□□ -2.59
SDC4P31431 RNU6-175P-201ENST00000516896 107 ntBASIC-1.13□□□□□ -2.59
SDC4P31431 RNU6-89P-201ENST00000606519 100 ntBASIC-1.13□□□□□ -2.59
SDC4P31431 RNU6-86P-201ENST00000606534 107 ntBASIC-1.13□□□□□ -2.59
SDC4P31431 AC011373.1-201ENST00000607270 237 ntBASIC-1.13□□□□□ -2.59
SDC4P31431 RNU6-1301P-201ENST00000362724 104 ntBASIC-1.14□□□□□ -2.59
SDC4P31431 RNA5SP368-201ENST00000364298 116 ntBASIC-1.14□□□□□ -2.59
SDC4P31431 SNORD56B-201ENST00000384713 71 ntBASIC-1.14□□□□□ -2.59
SDC4P31431 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-1.14□□□□□ -2.59
SDC4P31431 FCF1P4-201ENST00000448326 183 ntBASIC-1.14□□□□□ -2.59
SDC4P31431 MTCO2P4-201ENST00000517968 247 ntBASIC-1.14□□□□□ -2.59
SDC4P31431 DEFB131E-201ENST00000532329 154 ntBASIC-1.14□□□□□ -2.59
SDC4P31431 MIR4423-201ENST00000580922 80 ntBASIC-1.14□□□□□ -2.59
SDC4P31431 MIR4280-201ENST00000582178 76 ntBASIC-1.14□□□□□ -2.59
SDC4P31431 MIR3672-201ENST00000584290 82 ntBASIC-1.14□□□□□ -2.59
SDC4P31431 AC122108.2-201ENST00000611946 526 ntBASIC-1.14□□□□□ -2.59
SDC4P31431 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.14□□□□□ -2.59
SDC4P31431 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.15□□□□□ -2.59
SDC4P31431 RNU6-596P-201ENST00000365395 98 ntBASIC-1.15□□□□□ -2.59
SDC4P31431 Y_RNA.373-201ENST00000365600 103 ntBASIC-1.15□□□□□ -2.59
SDC4P31431 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.15□□□□□ -2.59
SDC4P31431 RNY3P10-201ENST00000384764 102 ntBASIC-1.15□□□□□ -2.59
SDC4P31431 RNU4-63P-201ENST00000411313 118 ntBASIC-1.15□□□□□ -2.59
SDC4P31431 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.15□□□□□ -2.59
SDC4P31431 RNU7-125P-201ENST00000458760 62 ntBASIC-1.15□□□□□ -2.59
SDC4P31431 MTND2P14-201ENST00000482139 351 ntBASIC-1.15□□□□□ -2.59
SDC4P31431 RNU6-998P-201ENST00000515894 101 ntBASIC-1.15□□□□□ -2.59
SDC4P31431 RNU6-470P-201ENST00000515954 104 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms