Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC015712.3-201ENST00000559380 164 ntBASIC2.26□□□□□ -2.05
HOXC12P31275 DEFB122-202ENST00000569013 197 ntBASIC2.26□□□□□ -2.05
HOXC12P31275 MIR5092-201ENST00000583139 88 ntBASIC2.26□□□□□ -2.05
HOXC12P31275 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.26□□□□□ -2.05
HOXC12P31275 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.25□□□□□ -2.05
HOXC12P31275 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
HOXC12P31275 MIR342-201ENST00000362212 99 ntBASIC2.25□□□□□ -2.05
HOXC12P31275 MIR424-201ENST00000362227 98 ntBASIC2.25□□□□□ -2.05
HOXC12P31275 MIR136-201ENST00000385207 82 ntBASIC2.25□□□□□ -2.05
HOXC12P31275 U8.17-201ENST00000391292 132 ntBASIC2.25□□□□□ -2.05
HOXC12P31275 RNU4-53P-201ENST00000410828 140 ntBASIC2.25□□□□□ -2.05
HOXC12P31275 AL356379.1-201ENST00000414105 126 ntBASIC2.25□□□□□ -2.05
HOXC12P31275 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.25□□□□□ -2.05
HOXC12P31275 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.25□□□□□ -2.05
HOXC12P31275 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HOXC12P31275 Y_RNA.273-201ENST00000364703 102 ntBASIC2.24□□□□□ -2.05
HOXC12P31275 SNORA40.5-201ENST00000391061 128 ntBASIC2.24□□□□□ -2.05
HOXC12P31275 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.24□□□□□ -2.05
HOXC12P31275 MIR1267-201ENST00000408723 78 ntBASIC2.24□□□□□ -2.05
HOXC12P31275 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.24□□□□□ -2.05
HOXC12P31275 RN7SKP19-201ENST00000516016 252 ntBASIC2.24□□□□□ -2.05
HOXC12P31275 Y_RNA.712-201ENST00000517011 92 ntBASIC2.24□□□□□ -2.05
HOXC12P31275 MIR4648-201ENST00000580107 72 ntBASIC2.24□□□□□ -2.05
HOXC12P31275 AC108081.1-201ENST00000604358 221 ntBASIC2.24□□□□□ -2.05
HOXC12P31275 U4.3-201ENST00000621047 82 ntBASIC2.24□□□□□ -2.05
HOXC12P31275 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.24□□□□□ -2.05
HOXC12P31275 ZNF720P1-201ENST00000562403 1939 ntBASIC2.23□□□□□ -2.05
HOXC12P31275 RNU1-133P-201ENST00000364867 167 ntBASIC2.23□□□□□ -2.05
HOXC12P31275 RNU6-203P-201ENST00000384038 104 ntBASIC2.23□□□□□ -2.05
HOXC12P31275 SNORA27-201ENST00000384323 126 ntBASIC2.23□□□□□ -2.05
HOXC12P31275 AL627390.1-201ENST00000396055 340 ntBASIC2.23□□□□□ -2.05
HOXC12P31275 Y_RNA.617-201ENST00000410920 90 ntBASIC2.23□□□□□ -2.05
HOXC12P31275 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.23□□□□□ -2.05
HOXC12P31275 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXC12P31275 RNU7-80P-201ENST00000459562 61 ntBASIC2.23□□□□□ -2.05
HOXC12P31275 RNU6-113P-201ENST00000516653 101 ntBASIC2.23□□□□□ -2.05
HOXC12P31275 RNA5SP402-201ENST00000517148 110 ntBASIC2.23□□□□□ -2.05
HOXC12P31275 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.23□□□□□ -2.05
HOXC12P31275 AL627230.6-201ENST00000611129 280 ntBASIC2.23□□□□□ -2.05
HOXC12P31275 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.23□□□□□ -2.05
HOXC12P31275 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
HOXC12P31275 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
HOXC12P31275 AP000648.3-201ENST00000623539 4507 ntBASIC2.22□□□□□ -2.05
HOXC12P31275 RNA5SP289-201ENST00000362332 137 ntBASIC2.22□□□□□ -2.05
HOXC12P31275 RNU6-457P-201ENST00000363999 107 ntBASIC2.22□□□□□ -2.05
HOXC12P31275 Y_RNA.353-201ENST00000365440 108 ntBASIC2.22□□□□□ -2.05
HOXC12P31275 Y_RNA.494-201ENST00000384432 111 ntBASIC2.22□□□□□ -2.05
HOXC12P31275 Y_RNA.563-201ENST00000384707 108 ntBASIC2.22□□□□□ -2.05
HOXC12P31275 MIR27B-201ENST00000385129 97 ntBASIC2.22□□□□□ -2.05
HOXC12P31275 RNU6-482P-201ENST00000391068 107 ntBASIC2.22□□□□□ -2.05
HOXC12P31275 Y_RNA.630-201ENST00000411370 108 ntBASIC2.22□□□□□ -2.05
HOXC12P31275 SNX2P2-201ENST00000424553 323 ntBASIC2.22□□□□□ -2.05
HOXC12P31275 AL591806.2-201ENST00000433122 173 ntBASIC2.22□□□□□ -2.05
HOXC12P31275 AL603825.1-201ENST00000438481 80 ntBASIC2.22□□□□□ -2.05
HOXC12P31275 RNU6-781P-201ENST00000516377 101 ntBASIC2.22□□□□□ -2.05
HOXC12P31275 AC002984.1-201ENST00000591692 448 ntBASIC2.22□□□□□ -2.05
HOXC12P31275 AL773524.1-201ENST00000614065 229 ntBASIC2.22□□□□□ -2.05
HOXC12P31275 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
HOXC12P31275 AL596211.1-201ENST00000569873 2277 ntBASIC2.21□□□□□ -2.06
HOXC12P31275 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.21□□□□□ -2.06
HOXC12P31275 SNORD114-30-201ENST00000364448 72 ntBASIC2.21□□□□□ -2.06
HOXC12P31275 SNORD58C-201ENST00000365223 64 ntBASIC2.21□□□□□ -2.06
HOXC12P31275 MIR526A1-201ENST00000384897 85 ntBASIC2.21□□□□□ -2.06
HOXC12P31275 AC107297.1-201ENST00000459991 176 ntBASIC2.21□□□□□ -2.06
HOXC12P31275 AC079804.2-201ENST00000490376 200 ntBASIC2.21□□□□□ -2.06
HOXC12P31275 RPS26P48-201ENST00000491713 339 ntBASIC2.21□□□□□ -2.06
HOXC12P31275 AC108210.2-201ENST00000503681 201 ntBASIC2.21□□□□□ -2.06
HOXC12P31275 SUMO2P16-201ENST00000519475 264 ntBASIC2.21□□□□□ -2.06
HOXC12P31275 FAM106DP-201ENST00000586416 501 ntBASIC2.21□□□□□ -2.06
HOXC12P31275 MIR3914-2-201ENST00000637339 95 ntBASIC2.21□□□□□ -2.06
HOXC12P31275 SNORA1.2-201ENST00000365189 134 ntBASIC2.2□□□□□ -2.06
HOXC12P31275 Y_RNA.370-201ENST00000365589 108 ntBASIC2.2□□□□□ -2.06
HOXC12P31275 RNU6-1056P-201ENST00000383996 107 ntBASIC2.2□□□□□ -2.06
HOXC12P31275 Y_RNA.454-201ENST00000384224 113 ntBASIC2.2□□□□□ -2.06
HOXC12P31275 SNORD20-201ENST00000384550 80 ntBASIC2.2□□□□□ -2.06
HOXC12P31275 MIR1263-201ENST00000408324 86 ntBASIC2.2□□□□□ -2.06
HOXC12P31275 RNU6-240P-201ENST00000516098 97 ntBASIC2.2□□□□□ -2.06
HOXC12P31275 IGKV1-22-201ENST00000524313 326 ntBASIC2.2□□□□□ -2.06
HOXC12P31275 AL137067.1-201ENST00000615933 120 ntBASIC2.2□□□□□ -2.06
HOXC12P31275 AC106754.2-201ENST00000623006 233 ntBASIC2.2□□□□□ -2.06
HOXC12P31275 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HOXC12P31275 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HOXC12P31275 AL359851.1-201ENST00000569460 4997 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 AL442644.1-201ENST00000454390 3105 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 RNU6-1123P-201ENST00000362347 106 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-34-201ENST00000362441 82 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-12-201ENST00000362583 82 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-29-201ENST00000362834 82 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-9-201ENST00000362912 82 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-21-201ENST00000362963 81 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-14-201ENST00000363090 81 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-13-201ENST00000363358 82 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-41-201ENST00000363608 82 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-11-201ENST00000363616 82 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-5-201ENST00000363633 82 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-39-201ENST00000363694 82 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 RNU6-414P-201ENST00000363705 104 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-4-201ENST00000363810 82 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-16-201ENST00000363887 82 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-6-201ENST00000363942 82 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 317.1 ms