Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RNU4-58P-201ENST00000363192 141 ntBASIC-1.72□□□□□ -2.68
CLIP1P30622 RNU6-169P-201ENST00000365336 107 ntBASIC-1.72□□□□□ -2.68
CLIP1P30622 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.72□□□□□ -2.68
CLIP1P30622 SNORA49-201ENST00000386157 136 ntBASIC-1.72□□□□□ -2.68
CLIP1P30622 RNU2-9P-201ENST00000410194 145 ntBASIC-1.72□□□□□ -2.68
CLIP1P30622 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.72□□□□□ -2.68
CLIP1P30622 SNORA40.17-201ENST00000517256 115 ntBASIC-1.72□□□□□ -2.68
CLIP1P30622 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.72□□□□□ -2.68
CLIP1P30622 AC022441.3-201ENST00000605737 136 ntBASIC-1.72□□□□□ -2.68
CLIP1P30622 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.73□□□□□ -2.69
CLIP1P30622 RNU6-606P-201ENST00000384721 111 ntBASIC-1.73□□□□□ -2.69
CLIP1P30622 RPS27AP14-201ENST00000422868 454 ntBASIC-1.73□□□□□ -2.69
CLIP1P30622 AC098614.3-201ENST00000438957 440 ntBASIC-1.73□□□□□ -2.69
CLIP1P30622 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.73□□□□□ -2.69
CLIP1P30622 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.73□□□□□ -2.69
CLIP1P30622 SNORD18.2-201ENST00000459604 70 ntBASIC-1.73□□□□□ -2.69
CLIP1P30622 AC112204.1-201ENST00000502591 103 ntBASIC-1.73□□□□□ -2.69
CLIP1P30622 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.73□□□□□ -2.69
CLIP1P30622 MIR3941-201ENST00000582572 103 ntBASIC-1.73□□□□□ -2.69
CLIP1P30622 JPX_2.1-201ENST00000614161 69 ntBASIC-1.73□□□□□ -2.69
CLIP1P30622 RNY1P12-201ENST00000364251 105 ntBASIC-1.74□□□□□ -2.69
CLIP1P30622 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.74□□□□□ -2.69
CLIP1P30622 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.74□□□□□ -2.69
CLIP1P30622 MIR548I3-201ENST00000408378 149 ntBASIC-1.74□□□□□ -2.69
CLIP1P30622 AC016907.1-201ENST00000419483 435 ntBASIC-1.74□□□□□ -2.69
CLIP1P30622 RNU6-479P-201ENST00000516348 105 ntBASIC-1.74□□□□□ -2.69
CLIP1P30622 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.74□□□□□ -2.69
CLIP1P30622 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.74□□□□□ -2.69
CLIP1P30622 SNORD114-17-201ENST00000364699 75 ntBASIC-1.74□□□□□ -2.69
CLIP1P30622 SNORA69-201ENST00000383895 132 ntBASIC-1.74□□□□□ -2.69
CLIP1P30622 RNU6-456P-201ENST00000384493 107 ntBASIC-1.74□□□□□ -2.69
CLIP1P30622 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.74□□□□□ -2.69
CLIP1P30622 AL353813.1-201ENST00000440700 253 ntBASIC-1.74□□□□□ -2.69
CLIP1P30622 RNU6-158P-201ENST00000517104 100 ntBASIC-1.74□□□□□ -2.69
CLIP1P30622 AC026421.1-201ENST00000519101 163 ntBASIC-1.74□□□□□ -2.69
CLIP1P30622 AL137161.1-201ENST00000532231 390 ntBASIC-1.74□□□□□ -2.69
CLIP1P30622 AC092807.2-201ENST00000609367 243 ntBASIC-1.74□□□□□ -2.69
CLIP1P30622 AC079248.2-201ENST00000623779 326 ntBASIC-1.74□□□□□ -2.69
CLIP1P30622 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.75□□□□□ -2.69
CLIP1P30622 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.75□□□□□ -2.69
CLIP1P30622 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.75□□□□□ -2.69
CLIP1P30622 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.75□□□□□ -2.69
CLIP1P30622 RNU6-413P-201ENST00000384115 107 ntBASIC-1.75□□□□□ -2.69
CLIP1P30622 RNU6-533P-201ENST00000384144 107 ntBASIC-1.75□□□□□ -2.69
CLIP1P30622 AC023449.1-201ENST00000454464 154 ntBASIC-1.75□□□□□ -2.69
CLIP1P30622 RNU7-134P-201ENST00000458997 64 ntBASIC-1.75□□□□□ -2.69
CLIP1P30622 RNU7-74P-201ENST00000459104 62 ntBASIC-1.75□□□□□ -2.69
CLIP1P30622 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.75□□□□□ -2.69
CLIP1P30622 MIR4703-201ENST00000577728 79 ntBASIC-1.75□□□□□ -2.69
CLIP1P30622 MIR5591-201ENST00000578248 65 ntBASIC-1.75□□□□□ -2.69
CLIP1P30622 CPDP1-201ENST00000579660 283 ntBASIC-1.75□□□□□ -2.69
CLIP1P30622 U4.1-201ENST00000620349 87 ntBASIC-1.75□□□□□ -2.69
CLIP1P30622 SEPT14P19-203ENST00000633205 211 ntBASIC-1.75□□□□□ -2.69
CLIP1P30622 MIR410-201ENST00000362222 80 ntBASIC-1.76□□□□□ -2.69
CLIP1P30622 RNA5SP133-201ENST00000363368 119 ntBASIC-1.76□□□□□ -2.69
CLIP1P30622 RNU6-281P-201ENST00000384212 103 ntBASIC-1.76□□□□□ -2.69
CLIP1P30622 SNORA27-201ENST00000384323 126 ntBASIC-1.76□□□□□ -2.69
CLIP1P30622 RNU6-831P-201ENST00000384548 107 ntBASIC-1.76□□□□□ -2.69
CLIP1P30622 SNORA40.5-201ENST00000391061 128 ntBASIC-1.76□□□□□ -2.69
CLIP1P30622 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.76□□□□□ -2.69
CLIP1P30622 AL442663.2-201ENST00000554385 511 ntBASIC-1.76□□□□□ -2.69
CLIP1P30622 AC005771.1-201ENST00000585581 349 ntBASIC-1.76□□□□□ -2.69
CLIP1P30622 U2.17-201ENST00000611454 95 ntBASIC-1.76□□□□□ -2.69
CLIP1P30622 AC104010.1-201ENST00000616889 150 ntBASIC-1.76□□□□□ -2.69
CLIP1P30622 MIR6717-201ENST00000622747 73 ntBASIC-1.76□□□□□ -2.69
CLIP1P30622 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.77□□□□□ -2.69
CLIP1P30622 SNORA26.6-201ENST00000391256 115 ntBASIC-1.77□□□□□ -2.69
CLIP1P30622 MIR548O-201ENST00000408583 114 ntBASIC-1.77□□□□□ -2.69
CLIP1P30622 AC093423.1-201ENST00000440817 142 ntBASIC-1.77□□□□□ -2.69
CLIP1P30622 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.78□□□□□ -2.69
CLIP1P30622 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.78□□□□□ -2.69
CLIP1P30622 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.78□□□□□ -2.69
CLIP1P30622 RNU6-476P-201ENST00000384726 107 ntBASIC-1.78□□□□□ -2.69
CLIP1P30622 MIR599-201ENST00000385069 95 ntBASIC-1.78□□□□□ -2.69
CLIP1P30622 AC244090.1-201ENST00000441884 93 ntBASIC-1.78□□□□□ -2.69
CLIP1P30622 AC016550.1-201ENST00000505348 785 ntBASIC-1.78□□□□□ -2.69
CLIP1P30622 AC021146.9-201ENST00000512503 156 ntBASIC-1.78□□□□□ -2.69
CLIP1P30622 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.78□□□□□ -2.69
CLIP1P30622 AL133215.3-201ENST00000609801 448 ntBASIC-1.78□□□□□ -2.69
CLIP1P30622 RNU6-653P-201ENST00000363074 106 ntBASIC-1.79□□□□□ -2.7
CLIP1P30622 SNORD115-30-201ENST00000364117 82 ntBASIC-1.79□□□□□ -2.7
CLIP1P30622 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.79□□□□□ -2.7
CLIP1P30622 RNU6-601P-201ENST00000384540 107 ntBASIC-1.79□□□□□ -2.7
CLIP1P30622 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.79□□□□□ -2.7
CLIP1P30622 SNORD77.3-201ENST00000391113 65 ntBASIC-1.79□□□□□ -2.7
CLIP1P30622 RNU6-938P-201ENST00000411285 103 ntBASIC-1.79□□□□□ -2.7
CLIP1P30622 RNU7-13P-201ENST00000516413 62 ntBASIC-1.79□□□□□ -2.7
CLIP1P30622 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.79□□□□□ -2.7
CLIP1P30622 AC093783.1-201ENST00000612976 329 ntBASIC-1.79□□□□□ -2.7
CLIP1P30622 MIR3674-201ENST00000636576 68 ntBASIC-1.79□□□□□ -2.7
CLIP1P30622 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.79□□□□□ -2.7
CLIP1P30622 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.8□□□□□ -2.7
CLIP1P30622 RNY1P13-201ENST00000365030 105 ntBASIC-1.8□□□□□ -2.7
CLIP1P30622 RNU6-74P-201ENST00000384235 107 ntBASIC-1.8□□□□□ -2.7
CLIP1P30622 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.8□□□□□ -2.7
CLIP1P30622 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.8□□□□□ -2.7
CLIP1P30622 RNU7-45P-201ENST00000459460 63 ntBASIC-1.8□□□□□ -2.7
CLIP1P30622 MTND5P40-201ENST00000559945 246 ntBASIC-1.8□□□□□ -2.7
CLIP1P30622 AC055872.1-201ENST00000570978 278 ntBASIC-1.8□□□□□ -2.7
CLIP1P30622 MIR5583-1-201ENST00000580941 59 ntBASIC-1.8□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms