Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.97□□□□□ -1.93
RXRBP28702 RNU6-1146P-201ENST00000516282 102 ntBASIC2.97□□□□□ -1.93
RXRBP28702 SNORA48.11-201ENST00000517015 89 ntBASIC2.97□□□□□ -1.93
RXRBP28702 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.97□□□□□ -1.93
RXRBP28702 AC022523.2-201ENST00000561045 150 ntBASIC2.97□□□□□ -1.93
RXRBP28702 AC002984.1-201ENST00000591692 448 ntBASIC2.97□□□□□ -1.93
RXRBP28702 MIR1245B-201ENST00000636115 69 ntBASIC2.97□□□□□ -1.93
RXRBP28702 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
RXRBP28702 RNU6-573P-201ENST00000383938 106 ntBASIC2.96□□□□□ -1.94
RXRBP28702 RNU6-1189P-201ENST00000383958 107 ntBASIC2.96□□□□□ -1.94
RXRBP28702 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
RXRBP28702 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.96□□□□□ -1.94
RXRBP28702 AC018868.1-201ENST00000491307 315 ntBASIC2.96□□□□□ -1.94
RXRBP28702 RNU6-1041P-201ENST00000516254 102 ntBASIC2.96□□□□□ -1.94
RXRBP28702 SNORD36C-201ENST00000516733 66 ntBASIC2.96□□□□□ -1.94
RXRBP28702 RNU6-826P-201ENST00000516827 104 ntBASIC2.96□□□□□ -1.94
RXRBP28702 SUMO2P16-201ENST00000519475 264 ntBASIC2.96□□□□□ -1.94
RXRBP28702 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.96□□□□□ -1.94
RXRBP28702 AC084364.2-201ENST00000546924 395 ntBASIC2.96□□□□□ -1.94
RXRBP28702 MIR5092-201ENST00000583139 88 ntBASIC2.96□□□□□ -1.94
RXRBP28702 AL353149.1-201ENST00000610667 244 ntBASIC2.96□□□□□ -1.94
RXRBP28702 AL359075.3-201ENST00000613288 217 ntBASIC2.96□□□□□ -1.94
RXRBP28702 MALAT1.1-201ENST00000618249 95 ntBASIC2.96□□□□□ -1.94
RXRBP28702 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
RXRBP28702 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RXRBP28702 Y_RNA.37-201ENST00000362606 108 ntBASIC2.95□□□□□ -1.94
RXRBP28702 RNU6-268P-201ENST00000364174 107 ntBASIC2.95□□□□□ -1.94
RXRBP28702 Y_RNA.440-201ENST00000384120 114 ntBASIC2.95□□□□□ -1.94
RXRBP28702 Y_RNA.547-201ENST00000384654 119 ntBASIC2.95□□□□□ -1.94
RXRBP28702 SNORA40.18-201ENST00000391200 128 ntBASIC2.95□□□□□ -1.94
RXRBP28702 AC019129.1-201ENST00000403786 261 ntBASIC2.95□□□□□ -1.94
RXRBP28702 AC009238.1-201ENST00000442165 424 ntBASIC2.95□□□□□ -1.94
RXRBP28702 AC009237.6-201ENST00000446969 424 ntBASIC2.95□□□□□ -1.94
RXRBP28702 AC023141.11-201ENST00000508864 202 ntBASIC2.95□□□□□ -1.94
RXRBP28702 RNU7-123P-201ENST00000515911 60 ntBASIC2.95□□□□□ -1.94
RXRBP28702 RN7SKP12-201ENST00000516275 143 ntBASIC2.95□□□□□ -1.94
RXRBP28702 MIR4762-201ENST00000585261 75 ntBASIC2.95□□□□□ -1.94
RXRBP28702 AC021443.1-201ENST00000604478 211 ntBASIC2.95□□□□□ -1.94
RXRBP28702 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.95□□□□□ -1.94
RXRBP28702 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.94□□□□□ -1.94
RXRBP28702 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
RXRBP28702 SNORA25.6-201ENST00000364121 118 ntBASIC2.94□□□□□ -1.94
RXRBP28702 Y_RNA.220-201ENST00000364244 109 ntBASIC2.94□□□□□ -1.94
RXRBP28702 SNORD114-6-201ENST00000364393 72 ntBASIC2.94□□□□□ -1.94
RXRBP28702 Y_RNA.342-201ENST00000365352 113 ntBASIC2.94□□□□□ -1.94
RXRBP28702 RNU6-1152P-201ENST00000384576 107 ntBASIC2.94□□□□□ -1.94
RXRBP28702 MIR548D2-201ENST00000384955 97 ntBASIC2.94□□□□□ -1.94
RXRBP28702 AC092427.1-202ENST00000430569 476 ntBASIC2.94□□□□□ -1.94
RXRBP28702 AL049830.1-201ENST00000468034 425 ntBASIC2.94□□□□□ -1.94
RXRBP28702 AC022217.4-201ENST00000604389 163 ntBASIC2.94□□□□□ -1.94
RXRBP28702 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
RXRBP28702 RNU6-661P-201ENST00000362409 107 ntBASIC2.93□□□□□ -1.94
RXRBP28702 SNORD115-28-201ENST00000363931 81 ntBASIC2.93□□□□□ -1.94
RXRBP28702 Y_RNA.242-201ENST00000364473 110 ntBASIC2.93□□□□□ -1.94
RXRBP28702 RNY1P6-201ENST00000384193 109 ntBASIC2.93□□□□□ -1.94
RXRBP28702 RNU2-63P-201ENST00000410792 194 ntBASIC2.93□□□□□ -1.94
RXRBP28702 RNA5SP182-201ENST00000516064 82 ntBASIC2.93□□□□□ -1.94
RXRBP28702 RNU2-35P-201ENST00000516446 142 ntBASIC2.93□□□□□ -1.94
RXRBP28702 RNU6-638P-201ENST00000516582 104 ntBASIC2.93□□□□□ -1.94
RXRBP28702 MIR3670-2-201ENST00000582974 65 ntBASIC2.93□□□□□ -1.94
RXRBP28702 MIR3670-1-201ENST00000584160 65 ntBASIC2.93□□□□□ -1.94
RXRBP28702 MIR3670-3-201ENST00000584855 65 ntBASIC2.93□□□□□ -1.94
RXRBP28702 SNORD115-40-201ENST00000606510 82 ntBASIC2.93□□□□□ -1.94
RXRBP28702 AC067747.1-201ENST00000608026 250 ntBASIC2.93□□□□□ -1.94
RXRBP28702 MIR3670-4-201ENST00000612260 65 ntBASIC2.93□□□□□ -1.94
RXRBP28702 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RXRBP28702 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
RXRBP28702 ZNF355P-201ENST00000427301 3216 ntBASIC2.92□□□□□ -1.94
RXRBP28702 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RXRBP28702 MIR302B-201ENST00000362188 73 ntBASIC2.92□□□□□ -1.94
RXRBP28702 RNU6-461P-201ENST00000364195 107 ntBASIC2.92□□□□□ -1.94
RXRBP28702 U8.5-201ENST00000364528 136 ntBASIC2.92□□□□□ -1.94
RXRBP28702 MIR1276-201ENST00000408707 83 ntBASIC2.92□□□□□ -1.94
RXRBP28702 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.92□□□□□ -1.94
RXRBP28702 AC099677.2-201ENST00000436385 175 ntBASIC2.92□□□□□ -1.94
RXRBP28702 RNA5SP57-201ENST00000459463 123 ntBASIC2.92□□□□□ -1.94
RXRBP28702 SNORA31.4-201ENST00000516049 129 ntBASIC2.92□□□□□ -1.94
RXRBP28702 AP002004.2-201ENST00000531656 154 ntBASIC2.92□□□□□ -1.94
RXRBP28702 AC141557.1-201ENST00000540982 400 ntBASIC2.92□□□□□ -1.94
RXRBP28702 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.91□□□□□ -1.94
RXRBP28702 RNU6-42P-201ENST00000384165 107 ntBASIC2.91□□□□□ -1.94
RXRBP28702 MIR561-201ENST00000385216 97 ntBASIC2.91□□□□□ -1.94
RXRBP28702 RNU11-5P-201ENST00000391216 129 ntBASIC2.91□□□□□ -1.94
RXRBP28702 RNU7-164P-201ENST00000459221 62 ntBASIC2.91□□□□□ -1.94
RXRBP28702 Y_RNA.714-201ENST00000517065 90 ntBASIC2.91□□□□□ -1.94
RXRBP28702 HSPE1P19-201ENST00000603327 295 ntBASIC2.91□□□□□ -1.94
RXRBP28702 BX248123.2-201ENST00000606318 124 ntBASIC2.91□□□□□ -1.94
RXRBP28702 MIR6504-201ENST00000613520 61 ntBASIC2.91□□□□□ -1.94
RXRBP28702 AL162726.3-218ENST00000636401 95 ntBASIC2.91□□□□□ -1.94
RXRBP28702 AL161431.1-201ENST00000618966 4205 ntBASIC2.91□□□□□ -1.94
RXRBP28702 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RXRBP28702 Y_RNA.93-201ENST00000363066 109 ntBASIC2.9□□□□□ -1.95
RXRBP28702 RNU6-442P-201ENST00000383968 104 ntBASIC2.9□□□□□ -1.95
RXRBP28702 MIR627-201ENST00000384979 97 ntBASIC2.9□□□□□ -1.95
RXRBP28702 RNU4-62P-201ENST00000410125 130 ntBASIC2.9□□□□□ -1.95
RXRBP28702 RPS3AP1-201ENST00000413190 320 ntBASIC2.9□□□□□ -1.95
RXRBP28702 AC107297.1-201ENST00000459991 176 ntBASIC2.9□□□□□ -1.95
RXRBP28702 RNU1-142P-201ENST00000516682 145 ntBASIC2.9□□□□□ -1.95
RXRBP28702 MIR4305-201ENST00000583252 102 ntBASIC2.9□□□□□ -1.95
RXRBP28702 MIR6779-201ENST00000617283 64 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 183 ms