Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.92□□□□□ -1.94
RFX1P22670 PDCD5P2-201ENST00000507570 312 ntBASIC2.92□□□□□ -1.94
RFX1P22670 MIR4446-201ENST00000578505 67 ntBASIC2.92□□□□□ -1.94
RFX1P22670 MIR4769-201ENST00000584126 77 ntBASIC2.92□□□□□ -1.94
RFX1P22670 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.92□□□□□ -1.94
RFX1P22670 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.92□□□□□ -1.94
RFX1P22670 MIR6733-201ENST00000635723 61 ntBASIC2.92□□□□□ -1.94
RFX1P22670 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RFX1P22670 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RFX1P22670 RNU6-1123P-201ENST00000362347 106 ntBASIC2.91□□□□□ -1.94
RFX1P22670 SNORA67.1-201ENST00000364749 141 ntBASIC2.91□□□□□ -1.94
RFX1P22670 RNY1P6-201ENST00000384193 109 ntBASIC2.91□□□□□ -1.94
RFX1P22670 Y_RNA.494-201ENST00000384432 111 ntBASIC2.91□□□□□ -1.94
RFX1P22670 MIR548A1-201ENST00000385041 97 ntBASIC2.91□□□□□ -1.94
RFX1P22670 MIR516B2-201ENST00000385190 85 ntBASIC2.91□□□□□ -1.94
RFX1P22670 MIR9-1-201ENST00000385198 89 ntBASIC2.91□□□□□ -1.94
RFX1P22670 MIR1267-201ENST00000408723 78 ntBASIC2.91□□□□□ -1.94
RFX1P22670 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.91□□□□□ -1.94
RFX1P22670 RNU7-181P-201ENST00000517234 74 ntBASIC2.91□□□□□ -1.94
RFX1P22670 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RFX1P22670 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX1P22670 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.91□□□□□ -1.94
RFX1P22670 AC091932.4-201ENST00000623386 200 ntBASIC2.91□□□□□ -1.94
RFX1P22670 SNORD3E-202ENST00000627253 216 ntBASIC2.91□□□□□ -1.94
RFX1P22670 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.9□□□□□ -1.95
RFX1P22670 Y_RNA.35-201ENST00000362601 101 ntBASIC2.9□□□□□ -1.95
RFX1P22670 RNU1-138P-201ENST00000384093 164 ntBASIC2.9□□□□□ -1.95
RFX1P22670 AC063976.4-201ENST00000421971 163 ntBASIC2.9□□□□□ -1.95
RFX1P22670 RNU7-96P-201ENST00000459535 64 ntBASIC2.9□□□□□ -1.95
RFX1P22670 COX6CP6-201ENST00000490840 228 ntBASIC2.9□□□□□ -1.95
RFX1P22670 SNORD53-201ENST00000579969 78 ntBASIC2.9□□□□□ -1.95
RFX1P22670 MIR6817-201ENST00000615588 66 ntBASIC2.9□□□□□ -1.95
RFX1P22670 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RFX1P22670 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RFX1P22670 SNORA22-201ENST00000383907 134 ntBASIC2.89□□□□□ -1.95
RFX1P22670 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.89□□□□□ -1.95
RFX1P22670 AC107297.1-201ENST00000459991 176 ntBASIC2.89□□□□□ -1.95
RFX1P22670 MIR5194-201ENST00000582634 120 ntBASIC2.89□□□□□ -1.95
RFX1P22670 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.89□□□□□ -1.95
RFX1P22670 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RFX1P22670 AL596211.1-201ENST00000569873 2277 ntBASIC2.89□□□□□ -1.95
RFX1P22670 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RFX1P22670 RNU6-998P-201ENST00000515894 101 ntBASIC2.88□□□□□ -1.95
RFX1P22670 MIR4635-201ENST00000583759 79 ntBASIC2.88□□□□□ -1.95
RFX1P22670 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
RFX1P22670 MIR342-201ENST00000362212 99 ntBASIC2.87□□□□□ -1.95
RFX1P22670 RNU6-755P-201ENST00000364400 103 ntBASIC2.87□□□□□ -1.95
RFX1P22670 MIR194-1-201ENST00000384892 85 ntBASIC2.87□□□□□ -1.95
RFX1P22670 AC011753.1-201ENST00000451001 220 ntBASIC2.87□□□□□ -1.95
RFX1P22670 RPS29P24-201ENST00000486345 171 ntBASIC2.87□□□□□ -1.95
RFX1P22670 AC090821.2-201ENST00000523552 176 ntBASIC2.87□□□□□ -1.95
RFX1P22670 MIR5092-201ENST00000583139 88 ntBASIC2.87□□□□□ -1.95
RFX1P22670 AC021443.1-201ENST00000604478 211 ntBASIC2.87□□□□□ -1.95
RFX1P22670 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RFX1P22670 RNA5SP68-201ENST00000363885 119 ntBASIC2.86□□□□□ -1.95
RFX1P22670 RNU6-880P-201ENST00000384526 107 ntBASIC2.86□□□□□ -1.95
RFX1P22670 MIR526A1-201ENST00000384897 85 ntBASIC2.86□□□□□ -1.95
RFX1P22670 MIR570-201ENST00000384917 97 ntBASIC2.86□□□□□ -1.95
RFX1P22670 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.86□□□□□ -1.95
RFX1P22670 SNX2P2-201ENST00000424553 323 ntBASIC2.86□□□□□ -1.95
RFX1P22670 RNA5SP282-201ENST00000516355 108 ntBASIC2.86□□□□□ -1.95
RFX1P22670 RNA5SP148-201ENST00000516527 94 ntBASIC2.86□□□□□ -1.95
RFX1P22670 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
RFX1P22670 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
RFX1P22670 HMGN2P35-201ENST00000412164 270 ntBASIC2.85□□□□□ -1.95
RFX1P22670 RN7SL499P-201ENST00000481141 276 ntBASIC2.85□□□□□ -1.95
RFX1P22670 RNU2-13P-201ENST00000515909 113 ntBASIC2.85□□□□□ -1.95
RFX1P22670 HSPE1P19-201ENST00000603327 295 ntBASIC2.85□□□□□ -1.95
RFX1P22670 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.85□□□□□ -1.95
RFX1P22670 RNU6-1298P-201ENST00000362456 101 ntBASIC2.84□□□□□ -1.95
RFX1P22670 Y_RNA.198-201ENST00000364013 98 ntBASIC2.84□□□□□ -1.95
RFX1P22670 Y_RNA.298-201ENST00000364960 107 ntBASIC2.84□□□□□ -1.95
RFX1P22670 Y_RNA.370-201ENST00000365589 108 ntBASIC2.84□□□□□ -1.95
RFX1P22670 AL035398.1-201ENST00000430869 322 ntBASIC2.84□□□□□ -1.95
RFX1P22670 RNY4P20-201ENST00000516678 93 ntBASIC2.84□□□□□ -1.95
RFX1P22670 RNU6-826P-201ENST00000516827 104 ntBASIC2.84□□□□□ -1.95
RFX1P22670 MIR3683-201ENST00000580847 82 ntBASIC2.84□□□□□ -1.95
RFX1P22670 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.84□□□□□ -1.95
RFX1P22670 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
RFX1P22670 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
RFX1P22670 RNA5SP393-201ENST00000363423 117 ntBASIC2.83□□□□□ -1.96
RFX1P22670 RNU1-112P-201ENST00000364401 164 ntBASIC2.83□□□□□ -1.96
RFX1P22670 SNORA70.7-201ENST00000384159 133 ntBASIC2.83□□□□□ -1.96
RFX1P22670 RNU7-164P-201ENST00000459221 62 ntBASIC2.83□□□□□ -1.96
RFX1P22670 SNORA31.4-201ENST00000516049 129 ntBASIC2.83□□□□□ -1.96
RFX1P22670 MIR203B-201ENST00000636080 86 ntBASIC2.83□□□□□ -1.96
RFX1P22670 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RFX1P22670 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
RFX1P22670 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
RFX1P22670 Z82195.2-201ENST00000612348 18351 ntBASIC2.82□□□□□ -1.96
RFX1P22670 AC005336.3-201ENST00000623833 2679 ntBASIC2.82□□□□□ -1.96
RFX1P22670 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.82□□□□□ -1.96
RFX1P22670 MIR302B-201ENST00000362188 73 ntBASIC2.82□□□□□ -1.96
RFX1P22670 SNORA24-201ENST00000384096 131 ntBASIC2.82□□□□□ -1.96
RFX1P22670 AC004965.1-201ENST00000413033 213 ntBASIC2.82□□□□□ -1.96
RFX1P22670 RNA5SP57-201ENST00000459463 123 ntBASIC2.82□□□□□ -1.96
RFX1P22670 SNORD123-201ENST00000459473 70 ntBASIC2.82□□□□□ -1.96
RFX1P22670 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.82□□□□□ -1.96
RFX1P22670 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.82□□□□□ -1.96
RFX1P22670 SUMO2P16-201ENST00000519475 264 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms