Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.78□□□□□ -2.12
TNFRSF1BP20333 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
TNFRSF1BP20333 MTND5P18-201ENST00000445624 1801 ntBASIC1.77□□□□□ -2.13
TNFRSF1BP20333 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
TNFRSF1BP20333 RNU6-1084P-201ENST00000362498 107 ntBASIC1.77□□□□□ -2.13
TNFRSF1BP20333 SNORA63D-201ENST00000364359 132 ntBASIC1.77□□□□□ -2.13
TNFRSF1BP20333 Y_RNA.510-201ENST00000384511 114 ntBASIC1.77□□□□□ -2.13
TNFRSF1BP20333 MIR624-201ENST00000385217 97 ntBASIC1.77□□□□□ -2.13
TNFRSF1BP20333 RN7SKP200-201ENST00000410564 320 ntBASIC1.77□□□□□ -2.13
TNFRSF1BP20333 AL356379.1-201ENST00000414105 126 ntBASIC1.77□□□□□ -2.13
TNFRSF1BP20333 Z98742.3-201ENST00000418637 326 ntBASIC1.77□□□□□ -2.13
TNFRSF1BP20333 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.77□□□□□ -2.13
TNFRSF1BP20333 SNRPGP13-201ENST00000442212 177 ntBASIC1.77□□□□□ -2.13
TNFRSF1BP20333 STAG3L5P-204ENST00000443759 179 ntBASIC1.77□□□□□ -2.13
TNFRSF1BP20333 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.77□□□□□ -2.13
TNFRSF1BP20333 Y_RNA.690-201ENST00000516603 95 ntBASIC1.77□□□□□ -2.13
TNFRSF1BP20333 AC025166.1-201ENST00000612411 163 ntBASIC1.77□□□□□ -2.13
TNFRSF1BP20333 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.77□□□□□ -2.13
TNFRSF1BP20333 AP001318.4-201ENST00000616637 121 ntBASIC1.77□□□□□ -2.13
TNFRSF1BP20333 uc_338.20-201ENST00000621563 178 ntBASIC1.77□□□□□ -2.13
TNFRSF1BP20333 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.77□□□□□ -2.13
TNFRSF1BP20333 RNU6-766P-201ENST00000362478 107 ntBASIC1.76□□□□□ -2.13
TNFRSF1BP20333 Y_RNA.85-201ENST00000363014 111 ntBASIC1.76□□□□□ -2.13
TNFRSF1BP20333 Y_RNA.336-201ENST00000365307 109 ntBASIC1.76□□□□□ -2.13
TNFRSF1BP20333 MIR520A-201ENST00000384862 85 ntBASIC1.76□□□□□ -2.13
TNFRSF1BP20333 AL034345.1-201ENST00000407768 123 ntBASIC1.76□□□□□ -2.13
TNFRSF1BP20333 RNY4P30-201ENST00000410216 95 ntBASIC1.76□□□□□ -2.13
TNFRSF1BP20333 AL445646.1-201ENST00000431784 216 ntBASIC1.76□□□□□ -2.13
TNFRSF1BP20333 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.76□□□□□ -2.13
TNFRSF1BP20333 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.76□□□□□ -2.13
TNFRSF1BP20333 MIR4529-201ENST00000578110 78 ntBASIC1.76□□□□□ -2.13
TNFRSF1BP20333 U1.36-201ENST00000620684 176 ntBASIC1.76□□□□□ -2.13
TNFRSF1BP20333 AC106754.2-201ENST00000623006 233 ntBASIC1.76□□□□□ -2.13
TNFRSF1BP20333 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TNFRSF1BP20333 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TNFRSF1BP20333 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
TNFRSF1BP20333 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TNFRSF1BP20333 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TNFRSF1BP20333 SNORA16B-201ENST00000364674 135 ntBASIC1.75□□□□□ -2.13
TNFRSF1BP20333 RNU6-1107P-201ENST00000364817 104 ntBASIC1.75□□□□□ -2.13
TNFRSF1BP20333 Y_RNA.346-201ENST00000365385 112 ntBASIC1.75□□□□□ -2.13
TNFRSF1BP20333 SNORD18B-201ENST00000365659 72 ntBASIC1.75□□□□□ -2.13
TNFRSF1BP20333 MIR488-201ENST00000365739 83 ntBASIC1.75□□□□□ -2.13
TNFRSF1BP20333 RNU6-1292P-201ENST00000383856 107 ntBASIC1.75□□□□□ -2.13
TNFRSF1BP20333 SNORD61-201ENST00000384252 73 ntBASIC1.75□□□□□ -2.13
TNFRSF1BP20333 MIR17-201ENST00000385012 84 ntBASIC1.75□□□□□ -2.13
TNFRSF1BP20333 CALM2P4-201ENST00000430810 426 ntBASIC1.75□□□□□ -2.13
TNFRSF1BP20333 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TNFRSF1BP20333 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.75□□□□□ -2.13
TNFRSF1BP20333 RNVU1-2-201ENST00000516326 135 ntBASIC1.75□□□□□ -2.13
TNFRSF1BP20333 RNU6-1270P-201ENST00000517128 108 ntBASIC1.75□□□□□ -2.13
TNFRSF1BP20333 MIR1273D-201ENST00000577266 86 ntBASIC1.75□□□□□ -2.13
TNFRSF1BP20333 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.75□□□□□ -2.13
TNFRSF1BP20333 AL022345.2-201ENST00000606307 135 ntBASIC1.75□□□□□ -2.13
TNFRSF1BP20333 AC006441.5-201ENST00000612680 209 ntBASIC1.75□□□□□ -2.13
TNFRSF1BP20333 AL121890.5-201ENST00000620848 304 ntBASIC1.75□□□□□ -2.13
TNFRSF1BP20333 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.75□□□□□ -2.13
TNFRSF1BP20333 RNU6-525P-201ENST00000363685 104 ntBASIC1.74□□□□□ -2.13
TNFRSF1BP20333 RNU6-294P-201ENST00000364999 102 ntBASIC1.74□□□□□ -2.13
TNFRSF1BP20333 SNORA51.10-201ENST00000384418 136 ntBASIC1.74□□□□□ -2.13
TNFRSF1BP20333 Y_RNA.549-201ENST00000384657 102 ntBASIC1.74□□□□□ -2.13
TNFRSF1BP20333 MIR23A-201ENST00000385245 73 ntBASIC1.74□□□□□ -2.13
TNFRSF1BP20333 RNU2-7P-201ENST00000410794 178 ntBASIC1.74□□□□□ -2.13
TNFRSF1BP20333 HMGN2P19-201ENST00000425149 265 ntBASIC1.74□□□□□ -2.13
TNFRSF1BP20333 AL356320.1-201ENST00000429616 163 ntBASIC1.74□□□□□ -2.13
TNFRSF1BP20333 AC003989.2-201ENST00000440224 169 ntBASIC1.74□□□□□ -2.13
TNFRSF1BP20333 RNU6-693P-201ENST00000516134 107 ntBASIC1.74□□□□□ -2.13
TNFRSF1BP20333 Y_RNA.666-201ENST00000516187 112 ntBASIC1.74□□□□□ -2.13
TNFRSF1BP20333 SNORD45.4-201ENST00000516629 73 ntBASIC1.74□□□□□ -2.13
TNFRSF1BP20333 RNA5SP481-201ENST00000516814 122 ntBASIC1.74□□□□□ -2.13
TNFRSF1BP20333 MIR3129-201ENST00000581095 76 ntBASIC1.74□□□□□ -2.13
TNFRSF1BP20333 AC062037.1-201ENST00000605302 128 ntBASIC1.74□□□□□ -2.13
TNFRSF1BP20333 RNU6-94P-201ENST00000607728 107 ntBASIC1.74□□□□□ -2.13
TNFRSF1BP20333 AL035470.1-201ENST00000622571 220 ntBASIC1.74□□□□□ -2.13
TNFRSF1BP20333 AC027279.3-201ENST00000625055 122 ntBASIC1.74□□□□□ -2.13
TNFRSF1BP20333 MIR219B-201ENST00000637023 88 ntBASIC1.74□□□□□ -2.13
TNFRSF1BP20333 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.73□□□□□ -2.13
TNFRSF1BP20333 MIR449A-201ENST00000362113 91 ntBASIC1.73□□□□□ -2.13
TNFRSF1BP20333 Y_RNA.163-201ENST00000363702 113 ntBASIC1.73□□□□□ -2.13
TNFRSF1BP20333 SNORA16.1-201ENST00000364597 132 ntBASIC1.73□□□□□ -2.13
TNFRSF1BP20333 RNU6-1131P-201ENST00000364955 107 ntBASIC1.73□□□□□ -2.13
TNFRSF1BP20333 Y_RNA.323-201ENST00000365157 109 ntBASIC1.73□□□□□ -2.13
TNFRSF1BP20333 SNORA3.2-201ENST00000408221 125 ntBASIC1.73□□□□□ -2.13
TNFRSF1BP20333 MIR548O-201ENST00000408583 114 ntBASIC1.73□□□□□ -2.13
TNFRSF1BP20333 RN7SKP223-201ENST00000410582 62 ntBASIC1.73□□□□□ -2.13
TNFRSF1BP20333 RNA5SP501-201ENST00000410990 112 ntBASIC1.73□□□□□ -2.13
TNFRSF1BP20333 SNORA31.10-201ENST00000516482 106 ntBASIC1.73□□□□□ -2.13
TNFRSF1BP20333 SNORA31.25-201ENST00000517242 134 ntBASIC1.73□□□□□ -2.13
TNFRSF1BP20333 SUB1P4-201ENST00000566062 339 ntBASIC1.73□□□□□ -2.13
TNFRSF1BP20333 AC078899.2-201ENST00000595282 212 ntBASIC1.73□□□□□ -2.13
TNFRSF1BP20333 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.73□□□□□ -2.13
TNFRSF1BP20333 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
TNFRSF1BP20333 SNORA1-201ENST00000384107 130 ntBASIC1.72□□□□□ -2.13
TNFRSF1BP20333 RNU6-163P-201ENST00000384396 106 ntBASIC1.72□□□□□ -2.13
TNFRSF1BP20333 MIR548A2-201ENST00000384956 97 ntBASIC1.72□□□□□ -2.13
TNFRSF1BP20333 MIR518F-201ENST00000384973 87 ntBASIC1.72□□□□□ -2.13
TNFRSF1BP20333 SNORA26.2-201ENST00000390922 122 ntBASIC1.72□□□□□ -2.13
TNFRSF1BP20333 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.72□□□□□ -2.13
TNFRSF1BP20333 HSPE1P9-201ENST00000440046 311 ntBASIC1.72□□□□□ -2.13
TNFRSF1BP20333 MTATP6P21-201ENST00000440681 189 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms