Protein–RNA interactions for Protein: P19793

RXRA, Retinoic acid receptor RXR-alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRAP19793 AC245047.8-201ENST00000456455 284 ntBASIC1.57□□□□□ -2.16
RXRAP19793 RNU1-123P-201ENST00000458950 160 ntBASIC1.57□□□□□ -2.16
RXRAP19793 SNORD11-201ENST00000459124 84 ntBASIC1.57□□□□□ -2.16
RXRAP19793 AC004223.1-201ENST00000479840 271 ntBASIC1.57□□□□□ -2.16
RXRAP19793 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.57□□□□□ -2.16
RXRAP19793 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.57□□□□□ -2.16
RXRAP19793 MIR4421-201ENST00000578133 69 ntBASIC1.57□□□□□ -2.16
RXRAP19793 MIR3664-201ENST00000579074 99 ntBASIC1.57□□□□□ -2.16
RXRAP19793 MIR378A-201ENST00000362177 66 ntBASIC1.56□□□□□ -2.16
RXRAP19793 RNU6-1084P-201ENST00000362498 107 ntBASIC1.56□□□□□ -2.16
RXRAP19793 RNU6-103P-201ENST00000363686 107 ntBASIC1.56□□□□□ -2.16
RXRAP19793 RNU6-1062P-201ENST00000383908 107 ntBASIC1.56□□□□□ -2.16
RXRAP19793 Y_RNA.412-201ENST00000384001 104 ntBASIC1.56□□□□□ -2.16
RXRAP19793 MIR616-201ENST00000385293 97 ntBASIC1.56□□□□□ -2.16
RXRAP19793 SCARNA8-201ENST00000515924 131 ntBASIC1.56□□□□□ -2.16
RXRAP19793 RNU6-322P-201ENST00000516010 103 ntBASIC1.56□□□□□ -2.16
RXRAP19793 RNU6-1007P-201ENST00000516586 107 ntBASIC1.56□□□□□ -2.16
RXRAP19793 RNU6-453P-201ENST00000516819 85 ntBASIC1.56□□□□□ -2.16
RXRAP19793 AC068338.1-201ENST00000565567 176 ntBASIC1.56□□□□□ -2.16
RXRAP19793 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RXRAP19793 AL021707.8-201ENST00000609428 183 ntBASIC1.56□□□□□ -2.16
RXRAP19793 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.56□□□□□ -2.16
RXRAP19793 MIR526A1-201ENST00000384897 85 ntBASIC1.55□□□□□ -2.16
RXRAP19793 SNORD41-201ENST00000386967 70 ntBASIC1.55□□□□□ -2.16
RXRAP19793 RNA5SP496-201ENST00000391240 109 ntBASIC1.55□□□□□ -2.16
RXRAP19793 MIR1278-201ENST00000408753 81 ntBASIC1.55□□□□□ -2.16
RXRAP19793 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.55□□□□□ -2.16
RXRAP19793 Y_RNA.797-201ENST00000515977 94 ntBASIC1.55□□□□□ -2.16
RXRAP19793 RPL23AP91-201ENST00000569211 455 ntBASIC1.55□□□□□ -2.16
RXRAP19793 MIR4498-201ENST00000577599 66 ntBASIC1.55□□□□□ -2.16
RXRAP19793 MIR4744-201ENST00000581563 82 ntBASIC1.55□□□□□ -2.16
RXRAP19793 AL391903.3-201ENST00000612158 163 ntBASIC1.55□□□□□ -2.16
RXRAP19793 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RXRAP19793 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RXRAP19793 Y_RNA.4-201ENST00000362333 112 ntBASIC1.54□□□□□ -2.16
RXRAP19793 Y_RNA.75-201ENST00000362927 97 ntBASIC1.54□□□□□ -2.16
RXRAP19793 Y_RNA.242-201ENST00000364473 110 ntBASIC1.54□□□□□ -2.16
RXRAP19793 RNU6-275P-201ENST00000364910 107 ntBASIC1.54□□□□□ -2.16
RXRAP19793 Y_RNA.464-201ENST00000384282 110 ntBASIC1.54□□□□□ -2.16
RXRAP19793 MT-TT-201ENST00000387460 66 ntBASIC1.54□□□□□ -2.16
RXRAP19793 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
RXRAP19793 RNU6-578P-201ENST00000390980 103 ntBASIC1.54□□□□□ -2.16
RXRAP19793 MRPS18CP4-201ENST00000535821 231 ntBASIC1.54□□□□□ -2.16
RXRAP19793 AC008507.4-201ENST00000585464 127 ntBASIC1.54□□□□□ -2.16
RXRAP19793 GHRLOS.1-201ENST00000610995 70 ntBASIC1.54□□□□□ -2.16
RXRAP19793 AC108706.1-201ENST00000611053 297 ntBASIC1.54□□□□□ -2.16
RXRAP19793 SNORA7.1-201ENST00000363750 139 ntBASIC1.53□□□□□ -2.16
RXRAP19793 AL451046.2-201ENST00000403074 277 ntBASIC1.53□□□□□ -2.16
RXRAP19793 AL606845.1-201ENST00000404881 255 ntBASIC1.53□□□□□ -2.16
RXRAP19793 RNU5E-9P-201ENST00000411164 104 ntBASIC1.53□□□□□ -2.16
RXRAP19793 SUMO1P3-201ENST00000439961 304 ntBASIC1.53□□□□□ -2.16
RXRAP19793 AC109810.1-201ENST00000534066 224 ntBASIC1.53□□□□□ -2.16
RXRAP19793 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.53□□□□□ -2.16
RXRAP19793 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.52□□□□□ -2.17
RXRAP19793 Y_RNA.23-201ENST00000362496 106 ntBASIC1.52□□□□□ -2.17
RXRAP19793 RNU6-312P-201ENST00000364629 107 ntBASIC1.52□□□□□ -2.17
RXRAP19793 RNU6-1228P-201ENST00000391014 107 ntBASIC1.52□□□□□ -2.17
RXRAP19793 AL603908.1-201ENST00000406098 201 ntBASIC1.52□□□□□ -2.17
RXRAP19793 SNRPGP14-201ENST00000435400 219 ntBASIC1.52□□□□□ -2.17
RXRAP19793 SEPT7P4-201ENST00000437076 306 ntBASIC1.52□□□□□ -2.17
RXRAP19793 RNU6-922P-201ENST00000516753 99 ntBASIC1.52□□□□□ -2.17
RXRAP19793 AL160236.1-201ENST00000556317 195 ntBASIC1.52□□□□□ -2.17
RXRAP19793 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.52□□□□□ -2.17
RXRAP19793 AL357312.1-201ENST00000603879 298 ntBASIC1.52□□□□□ -2.17
RXRAP19793 snoU13.31-201ENST00000607291 104 ntBASIC1.52□□□□□ -2.17
RXRAP19793 AC104465.1-201ENST00000611365 139 ntBASIC1.52□□□□□ -2.17
RXRAP19793 AL161722.3-201ENST00000605789 2983 ntBASIC1.51□□□□□ -2.17
RXRAP19793 SNORD14E-201ENST00000364009 85 ntBASIC1.51□□□□□ -2.17
RXRAP19793 Y_RNA.441-201ENST00000384123 112 ntBASIC1.51□□□□□ -2.17
RXRAP19793 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.51□□□□□ -2.17
RXRAP19793 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.51□□□□□ -2.17
RXRAP19793 AC015922.2-201ENST00000435593 184 ntBASIC1.51□□□□□ -2.17
RXRAP19793 AL121914.1-201ENST00000450188 156 ntBASIC1.51□□□□□ -2.17
RXRAP19793 AC009474.2-201ENST00000451383 136 ntBASIC1.51□□□□□ -2.17
RXRAP19793 RNU6-255P-201ENST00000516957 105 ntBASIC1.51□□□□□ -2.17
RXRAP19793 RNU6-1212P-201ENST00000517023 104 ntBASIC1.51□□□□□ -2.17
RXRAP19793 RNU6-165P-201ENST00000517170 99 ntBASIC1.51□□□□□ -2.17
RXRAP19793 AC090142.3-201ENST00000519012 385 ntBASIC1.51□□□□□ -2.17
RXRAP19793 AL049861.1-201ENST00000603130 150 ntBASIC1.51□□□□□ -2.17
RXRAP19793 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RXRAP19793 RNU6-442P-201ENST00000383968 104 ntBASIC1.5□□□□□ -2.17
RXRAP19793 RNY3P5-201ENST00000384127 102 ntBASIC1.5□□□□□ -2.17
RXRAP19793 RNU6-804P-201ENST00000384286 107 ntBASIC1.5□□□□□ -2.17
RXRAP19793 MIR15B-201ENST00000385045 98 ntBASIC1.5□□□□□ -2.17
RXRAP19793 MIR136-201ENST00000385207 82 ntBASIC1.5□□□□□ -2.17
RXRAP19793 Y_RNA.587-201ENST00000391210 103 ntBASIC1.5□□□□□ -2.17
RXRAP19793 RNU6-561P-201ENST00000516222 102 ntBASIC1.5□□□□□ -2.17
RXRAP19793 CYP3A52P-201ENST00000563326 91 ntBASIC1.5□□□□□ -2.17
RXRAP19793 FAM106DP-201ENST00000586416 501 ntBASIC1.5□□□□□ -2.17
RXRAP19793 AC021753.1-201ENST00000635724 168 ntBASIC1.5□□□□□ -2.17
RXRAP19793 Y_RNA.8-201ENST00000362353 102 ntBASIC1.49□□□□□ -2.17
RXRAP19793 Y_RNA.272-201ENST00000364696 102 ntBASIC1.49□□□□□ -2.17
RXRAP19793 RNU6-728P-201ENST00000365375 104 ntBASIC1.49□□□□□ -2.17
RXRAP19793 Y_RNA.357-201ENST00000365487 109 ntBASIC1.49□□□□□ -2.17
RXRAP19793 SNORD26-201ENST00000384147 75 ntBASIC1.49□□□□□ -2.17
RXRAP19793 MIR758-201ENST00000390227 88 ntBASIC1.49□□□□□ -2.17
RXRAP19793 SNORA40.6-201ENST00000391153 128 ntBASIC1.49□□□□□ -2.17
RXRAP19793 RNU6-394P-201ENST00000410735 107 ntBASIC1.49□□□□□ -2.17
RXRAP19793 RNU6-1135P-201ENST00000411083 103 ntBASIC1.49□□□□□ -2.17
RXRAP19793 Y_RNA.622-201ENST00000411091 108 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 295.7 ms