Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 RNU6-44P-201ENST00000384045 107 ntBASIC2.4□□□□□ -2.03
ITGA4P13612 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.4□□□□□ -2.03
ITGA4P13612 snoU13.27-201ENST00000459278 104 ntBASIC2.4□□□□□ -2.03
ITGA4P13612 AC104435.1-201ENST00000483483 166 ntBASIC2.4□□□□□ -2.03
ITGA4P13612 MIR6132-201ENST00000622083 109 ntBASIC2.4□□□□□ -2.03
ITGA4P13612 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.4□□□□□ -2.03
ITGA4P13612 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
ITGA4P13612 Y_RNA.440-201ENST00000384120 114 ntBASIC2.39□□□□□ -2.03
ITGA4P13612 SNORA64-201ENST00000384674 134 ntBASIC2.39□□□□□ -2.03
ITGA4P13612 RNA5SP100-201ENST00000410903 110 ntBASIC2.39□□□□□ -2.03
ITGA4P13612 RNA5SP59-201ENST00000410922 110 ntBASIC2.39□□□□□ -2.03
ITGA4P13612 AC087499.4-201ENST00000448505 178 ntBASIC2.39□□□□□ -2.03
ITGA4P13612 UBL5P3-201ENST00000475112 231 ntBASIC2.39□□□□□ -2.03
ITGA4P13612 RNA5SP200-201ENST00000516360 103 ntBASIC2.39□□□□□ -2.03
ITGA4P13612 RNU6-113P-201ENST00000516653 101 ntBASIC2.39□□□□□ -2.03
ITGA4P13612 RNA5SP481-201ENST00000516814 122 ntBASIC2.39□□□□□ -2.03
ITGA4P13612 SNORA18.7-201ENST00000516910 131 ntBASIC2.39□□□□□ -2.03
ITGA4P13612 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.39□□□□□ -2.03
ITGA4P13612 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.39□□□□□ -2.03
ITGA4P13612 MIR4446-201ENST00000578505 67 ntBASIC2.39□□□□□ -2.03
ITGA4P13612 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.39□□□□□ -2.03
ITGA4P13612 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.39□□□□□ -2.03
ITGA4P13612 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.39□□□□□ -2.03
ITGA4P13612 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ITGA4P13612 Y_RNA.366-201ENST00000365540 102 ntBASIC2.38□□□□□ -2.03
ITGA4P13612 MIRLET7F2-201ENST00000385277 83 ntBASIC2.38□□□□□ -2.03
ITGA4P13612 AC093850.1-201ENST00000454121 251 ntBASIC2.38□□□□□ -2.03
ITGA4P13612 AC099513.1-201ENST00000490423 301 ntBASIC2.38□□□□□ -2.03
ITGA4P13612 AC002984.1-201ENST00000591692 448 ntBASIC2.38□□□□□ -2.03
ITGA4P13612 AC009831.4-201ENST00000620744 325 ntBASIC2.38□□□□□ -2.03
ITGA4P13612 MIR1263-201ENST00000408324 86 ntBASIC2.37□□□□□ -2.03
ITGA4P13612 RNU6-240P-201ENST00000516098 97 ntBASIC2.37□□□□□ -2.03
ITGA4P13612 RNU7-70P-201ENST00000516941 66 ntBASIC2.37□□□□□ -2.03
ITGA4P13612 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
ITGA4P13612 AL049779.4-201ENST00000604500 156 ntBASIC2.37□□□□□ -2.03
ITGA4P13612 AL670379.3-201ENST00000605040 251 ntBASIC2.37□□□□□ -2.03
ITGA4P13612 AC025166.1-201ENST00000612411 163 ntBASIC2.37□□□□□ -2.03
ITGA4P13612 FO624990.1-201ENST00000636373 85 ntBASIC2.37□□□□□ -2.03
ITGA4P13612 SNORD114-1-201ENST00000362705 72 ntBASIC2.36□□□□□ -2.03
ITGA4P13612 RNA5SP393-201ENST00000363423 117 ntBASIC2.36□□□□□ -2.03
ITGA4P13612 SNORA67.3-201ENST00000384366 140 ntBASIC2.36□□□□□ -2.03
ITGA4P13612 MIR504-201ENST00000385065 83 ntBASIC2.36□□□□□ -2.03
ITGA4P13612 MIR516B2-201ENST00000385190 85 ntBASIC2.36□□□□□ -2.03
ITGA4P13612 RNU6-830P-201ENST00000516353 107 ntBASIC2.36□□□□□ -2.03
ITGA4P13612 SNORA31.17-201ENST00000516953 127 ntBASIC2.36□□□□□ -2.03
ITGA4P13612 AC245884.12-201ENST00000615364 59 ntBASIC2.36□□□□□ -2.03
ITGA4P13612 AL513423.1-201ENST00000621695 132 ntBASIC2.36□□□□□ -2.03
ITGA4P13612 MIR7843-201ENST00000622274 79 ntBASIC2.36□□□□□ -2.03
ITGA4P13612 MIR219B-201ENST00000637023 88 ntBASIC2.36□□□□□ -2.03
ITGA4P13612 AL442644.1-201ENST00000454390 3105 ntBASIC2.35□□□□□ -2.03
ITGA4P13612 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.35□□□□□ -2.03
ITGA4P13612 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.35□□□□□ -2.03
ITGA4P13612 Y_RNA.241-201ENST00000364470 117 ntBASIC2.35□□□□□ -2.03
ITGA4P13612 Y_RNA.346-201ENST00000365385 112 ntBASIC2.35□□□□□ -2.03
ITGA4P13612 RNU7-181P-201ENST00000517234 74 ntBASIC2.35□□□□□ -2.03
ITGA4P13612 MIR4778-201ENST00000577635 80 ntBASIC2.35□□□□□ -2.03
ITGA4P13612 MIR5194-201ENST00000582634 120 ntBASIC2.35□□□□□ -2.03
ITGA4P13612 AL137067.1-201ENST00000615933 120 ntBASIC2.35□□□□□ -2.03
ITGA4P13612 AL121890.5-201ENST00000620848 304 ntBASIC2.35□□□□□ -2.03
ITGA4P13612 MTND5P18-201ENST00000445624 1801 ntBASIC2.34□□□□□ -2.03
ITGA4P13612 MIRLET7G-201ENST00000362280 84 ntBASIC2.34□□□□□ -2.03
ITGA4P13612 RNU1-133P-201ENST00000364867 167 ntBASIC2.34□□□□□ -2.03
ITGA4P13612 Y_RNA.351-201ENST00000365436 96 ntBASIC2.34□□□□□ -2.03
ITGA4P13612 MIR452-201ENST00000385020 85 ntBASIC2.34□□□□□ -2.03
ITGA4P13612 MIR660-201ENST00000385235 97 ntBASIC2.34□□□□□ -2.03
ITGA4P13612 MIR548A3-201ENST00000385297 97 ntBASIC2.34□□□□□ -2.03
ITGA4P13612 AL023284.1-201ENST00000403956 276 ntBASIC2.34□□□□□ -2.03
ITGA4P13612 PGBD4P5-201ENST00000445958 426 ntBASIC2.34□□□□□ -2.03
ITGA4P13612 RPS26P48-201ENST00000491713 339 ntBASIC2.34□□□□□ -2.03
ITGA4P13612 RNU2-19P-201ENST00000517288 84 ntBASIC2.34□□□□□ -2.03
ITGA4P13612 SNORD3E-202ENST00000627253 216 ntBASIC2.34□□□□□ -2.03
ITGA4P13612 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.34□□□□□ -2.03
ITGA4P13612 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
ITGA4P13612 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ITGA4P13612 MIR342-201ENST00000362212 99 ntBASIC2.33□□□□□ -2.04
ITGA4P13612 RNU6-349P-201ENST00000362402 107 ntBASIC2.33□□□□□ -2.04
ITGA4P13612 RNU6-690P-201ENST00000365242 106 ntBASIC2.33□□□□□ -2.04
ITGA4P13612 AL627390.1-201ENST00000396055 340 ntBASIC2.33□□□□□ -2.04
ITGA4P13612 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.33□□□□□ -2.04
ITGA4P13612 SNX2P2-201ENST00000424553 323 ntBASIC2.33□□□□□ -2.04
ITGA4P13612 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.33□□□□□ -2.04
ITGA4P13612 AC090821.2-201ENST00000523552 176 ntBASIC2.33□□□□□ -2.04
ITGA4P13612 MIR5002-201ENST00000584713 97 ntBASIC2.33□□□□□ -2.04
ITGA4P13612 AC091932.4-201ENST00000623386 200 ntBASIC2.33□□□□□ -2.04
ITGA4P13612 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.33□□□□□ -2.04
ITGA4P13612 AP000553.5-201ENST00000641933 54 ntBASIC2.33□□□□□ -2.04
ITGA4P13612 AL596211.1-201ENST00000569873 2277 ntBASIC2.33□□□□□ -2.04
ITGA4P13612 AC092881.1-201ENST00000638218 2733 ntBASIC2.33□□□□□ -2.04
ITGA4P13612 RNY1P6-201ENST00000384193 109 ntBASIC2.32□□□□□ -2.04
ITGA4P13612 SNORA27-201ENST00000384323 126 ntBASIC2.32□□□□□ -2.04
ITGA4P13612 Y_RNA.494-201ENST00000384432 111 ntBASIC2.32□□□□□ -2.04
ITGA4P13612 Y_RNA.528-201ENST00000384575 108 ntBASIC2.32□□□□□ -2.04
ITGA4P13612 SNORA48.3-201ENST00000391081 134 ntBASIC2.32□□□□□ -2.04
ITGA4P13612 RNY4P18-201ENST00000391107 89 ntBASIC2.32□□□□□ -2.04
ITGA4P13612 U8.17-201ENST00000391292 132 ntBASIC2.32□□□□□ -2.04
ITGA4P13612 SNORD23.1-201ENST00000408212 104 ntBASIC2.32□□□□□ -2.04
ITGA4P13612 MIR1289-2-201ENST00000408360 111 ntBASIC2.32□□□□□ -2.04
ITGA4P13612 RNU7-80P-201ENST00000459562 61 ntBASIC2.32□□□□□ -2.04
ITGA4P13612 AC055731.1-201ENST00000474387 401 ntBASIC2.32□□□□□ -2.04
ITGA4P13612 Y_RNA.709-201ENST00000516952 92 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms