Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 RNU6-430P-201ENST00000517078 107 ntBASIC-0.72□□□□□ -2.52
COL6A3P12111 AC011373.1-201ENST00000607270 237 ntBASIC-0.72□□□□□ -2.52
COL6A3P12111 JPX_2.1-201ENST00000614161 69 ntBASIC-0.72□□□□□ -2.52
COL6A3P12111 Y_RNA.22-201ENST00000362492 102 ntBASIC-0.72□□□□□ -2.53
COL6A3P12111 RNU6-179P-201ENST00000363350 107 ntBASIC-0.72□□□□□ -2.53
COL6A3P12111 RNA5SP133-201ENST00000363368 119 ntBASIC-0.72□□□□□ -2.53
COL6A3P12111 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.72□□□□□ -2.53
COL6A3P12111 RNU6-926P-201ENST00000384075 107 ntBASIC-0.72□□□□□ -2.53
COL6A3P12111 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.72□□□□□ -2.53
COL6A3P12111 AC137499.1-201ENST00000427602 88 ntBASIC-0.72□□□□□ -2.53
COL6A3P12111 MTND1P27-201ENST00000451117 902 ntBASIC-0.72□□□□□ -2.53
COL6A3P12111 RNU6-479P-201ENST00000516348 105 ntBASIC-0.72□□□□□ -2.53
COL6A3P12111 RNU7-13P-201ENST00000516413 62 ntBASIC-0.72□□□□□ -2.53
COL6A3P12111 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.72□□□□□ -2.53
COL6A3P12111 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 Y_RNA.465-201ENST00000384293 102 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 MIR548H5-201ENST00000580314 60 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 AC097460.3-201ENST00000623099 442 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 RNU6-865P-201ENST00000364772 107 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 RNU6-407P-201ENST00000365280 104 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 RNU6-484P-201ENST00000384016 107 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 RNU6-949P-201ENST00000384040 107 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 MTND4LP7-201ENST00000431728 294 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 RNU6-329P-201ENST00000459618 107 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.73□□□□□ -2.53
COL6A3P12111 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.73□□□□□ -2.53
COL6A3P12111 AL137161.1-201ENST00000532231 390 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 AC245505.1-201ENST00000556398 224 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 RNU6-449P-201ENST00000383914 107 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 MIR599-201ENST00000385069 95 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 MTCO2P27-201ENST00000420740 428 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 AC022616.4-201ENST00000522985 181 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 AC123904.2-201ENST00000548059 300 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 YWHAEP2-201ENST00000580066 112 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 RNU6-88P-201ENST00000606801 100 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 MIR8068-201ENST00000618032 68 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 uc_338.11-201ENST00000619132 160 ntBASIC-0.73□□□□□ -2.53
COL6A3P12111 SNORD114-17-201ENST00000364699 75 ntBASIC-0.74□□□□□ -2.53
COL6A3P12111 RNU6-117P-201ENST00000365415 107 ntBASIC-0.74□□□□□ -2.53
COL6A3P12111 SNORD77.3-201ENST00000391113 65 ntBASIC-0.74□□□□□ -2.53
COL6A3P12111 RNU6-387P-201ENST00000411331 105 ntBASIC-0.74□□□□□ -2.53
COL6A3P12111 SNORD2-201ENST00000459163 69 ntBASIC-0.74□□□□□ -2.53
COL6A3P12111 RNU6-966P-201ENST00000516479 104 ntBASIC-0.74□□□□□ -2.53
COL6A3P12111 RNU7-53P-201ENST00000516705 60 ntBASIC-0.74□□□□□ -2.53
COL6A3P12111 AC069113.1-201ENST00000517763 267 ntBASIC-0.74□□□□□ -2.53
COL6A3P12111 snoR1.1-201ENST00000628177 80 ntBASIC-0.74□□□□□ -2.53
COL6A3P12111 Y_RNA.408-201ENST00000383987 102 ntBASIC-0.74□□□□□ -2.53
COL6A3P12111 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.74□□□□□ -2.53
COL6A3P12111 SNORA49-201ENST00000386157 136 ntBASIC-0.74□□□□□ -2.53
COL6A3P12111 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.74□□□□□ -2.53
COL6A3P12111 AC079140.5-201ENST00000507882 310 ntBASIC-0.74□□□□□ -2.53
COL6A3P12111 AP001282.2-201ENST00000616149 309 ntBASIC-0.74□□□□□ -2.53
COL6A3P12111 AC009159.2-201ENST00000617603 606 ntBASIC-0.74□□□□□ -2.53
COL6A3P12111 AC091931.1-201ENST00000623488 728 ntBASIC-0.74□□□□□ -2.53
COL6A3P12111 SNORD115-35-201ENST00000365122 82 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 RNU6-154P-201ENST00000384306 106 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 AC022028.1-201ENST00000412054 408 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 RPL30P16-201ENST00000419341 429 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 RNU7-134P-201ENST00000458997 64 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 MTND5P40-201ENST00000559945 246 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
COL6A3P12111 RNU7-10P-201ENST00000607194 63 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 AC009248.2-201ENST00000619826 254 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 AC068137.4-201ENST00000638485 296 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 RNU4-20P-201ENST00000365601 151 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 MIR889-201ENST00000401280 79 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 TPTE2P5-203ENST00000458118 728 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.75□□□□□ -2.53
COL6A3P12111 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 RNU6-612P-201ENST00000516909 102 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 AC099654.12-201ENST00000639868 649 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 SNORA20.2-201ENST00000383922 131 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 RNY4P13-201ENST00000384284 96 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 MIR652-201ENST00000385278 98 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 RNU6-325P-201ENST00000411132 105 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 MTND4LP14-201ENST00000429447 288 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 AL031667.1-201ENST00000440222 725 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 AC104996.3-201ENST00000590718 94 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 AL121757.2-201ENST00000611223 313 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 AL163152.1-201ENST00000642001 374 ntBASIC-0.75□□□□□ -2.53
COL6A3P12111 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.76□□□□□ -2.53
COL6A3P12111 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.76□□□□□ -2.53
COL6A3P12111 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
COL6A3P12111 RNA5SP237-201ENST00000410414 113 ntBASIC-0.76□□□□□ -2.53
COL6A3P12111 RNU2-29P-201ENST00000410423 189 ntBASIC-0.76□□□□□ -2.53
COL6A3P12111 AC096949.1-201ENST00000412047 152 ntBASIC-0.76□□□□□ -2.53
COL6A3P12111 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.76□□□□□ -2.53
COL6A3P12111 RNU6-1225P-201ENST00000516336 65 ntBASIC-0.76□□□□□ -2.53
COL6A3P12111 SNORA40.17-201ENST00000517256 115 ntBASIC-0.76□□□□□ -2.53
COL6A3P12111 MTND2P32-201ENST00000521584 1038 ntBASIC-0.76□□□□□ -2.53
COL6A3P12111 MTND1P35-201ENST00000526739 508 ntBASIC-0.76□□□□□ -2.53
COL6A3P12111 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.76□□□□□ -2.53
COL6A3P12111 MIR3118-1-201ENST00000581787 76 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms