Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 7SK.13-201ENST00000622040 250 ntBASIC1.38□□□□□ -2.19
PCNAP12004 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.38□□□□□ -2.19
PCNAP12004 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.37□□□□□ -2.19
PCNAP12004 RNU6-103P-201ENST00000363686 107 ntBASIC1.37□□□□□ -2.19
PCNAP12004 Y_RNA.257-201ENST00000364596 102 ntBASIC1.37□□□□□ -2.19
PCNAP12004 Y_RNA.634-201ENST00000364811 113 ntBASIC1.37□□□□□ -2.19
PCNAP12004 RNY3P5-201ENST00000384127 102 ntBASIC1.37□□□□□ -2.19
PCNAP12004 RNU4-70P-201ENST00000384579 139 ntBASIC1.37□□□□□ -2.19
PCNAP12004 MIR570-201ENST00000384917 97 ntBASIC1.37□□□□□ -2.19
PCNAP12004 MIR548A2-201ENST00000384956 97 ntBASIC1.37□□□□□ -2.19
PCNAP12004 RNU6-578P-201ENST00000390980 103 ntBASIC1.37□□□□□ -2.19
PCNAP12004 RNU2-70P-201ENST00000410718 179 ntBASIC1.37□□□□□ -2.19
PCNAP12004 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.37□□□□□ -2.19
PCNAP12004 AL121914.1-201ENST00000450188 156 ntBASIC1.37□□□□□ -2.19
PCNAP12004 RNU4-57P-201ENST00000515980 135 ntBASIC1.37□□□□□ -2.19
PCNAP12004 RNU6-693P-201ENST00000516134 107 ntBASIC1.37□□□□□ -2.19
PCNAP12004 RNU6-365P-201ENST00000517113 106 ntBASIC1.37□□□□□ -2.19
PCNAP12004 MIR4662B-201ENST00000579498 81 ntBASIC1.37□□□□□ -2.19
PCNAP12004 MIR548AR-201ENST00000582191 57 ntBASIC1.37□□□□□ -2.19
PCNAP12004 MIR3192-201ENST00000584920 77 ntBASIC1.37□□□□□ -2.19
PCNAP12004 MIR7843-201ENST00000622274 79 ntBASIC1.37□□□□□ -2.19
PCNAP12004 U6.106-201ENST00000636360 105 ntBASIC1.37□□□□□ -2.19
PCNAP12004 Y_RNA.66-201ENST00000362862 102 ntBASIC1.36□□□□□ -2.19
PCNAP12004 RNU6-1020P-201ENST00000363684 107 ntBASIC1.36□□□□□ -2.19
PCNAP12004 RNU6-728P-201ENST00000365375 104 ntBASIC1.36□□□□□ -2.19
PCNAP12004 Y_RNA.412-201ENST00000384001 104 ntBASIC1.36□□□□□ -2.19
PCNAP12004 RNU6-939P-201ENST00000384634 107 ntBASIC1.36□□□□□ -2.19
PCNAP12004 MIR518F-201ENST00000384973 87 ntBASIC1.36□□□□□ -2.19
PCNAP12004 MIR15B-201ENST00000385045 98 ntBASIC1.36□□□□□ -2.19
PCNAP12004 SNORA67.5-201ENST00000391036 107 ntBASIC1.36□□□□□ -2.19
PCNAP12004 U8.17-201ENST00000391292 132 ntBASIC1.36□□□□□ -2.19
PCNAP12004 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.36□□□□□ -2.19
PCNAP12004 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.36□□□□□ -2.19
PCNAP12004 snoU13.25-201ENST00000458945 104 ntBASIC1.36□□□□□ -2.19
PCNAP12004 RPL30P7-201ENST00000479312 323 ntBASIC1.36□□□□□ -2.19
PCNAP12004 AC108210.2-201ENST00000503681 201 ntBASIC1.36□□□□□ -2.19
PCNAP12004 RNU7-41P-201ENST00000515917 61 ntBASIC1.36□□□□□ -2.19
PCNAP12004 RNU1-92P-201ENST00000517017 135 ntBASIC1.36□□□□□ -2.19
PCNAP12004 MIR4303-201ENST00000581299 66 ntBASIC1.36□□□□□ -2.19
PCNAP12004 Y_RNA.23-201ENST00000362496 106 ntBASIC1.35□□□□□ -2.19
PCNAP12004 RNU6-200P-201ENST00000364743 107 ntBASIC1.35□□□□□ -2.19
PCNAP12004 MIR520C-201ENST00000385005 87 ntBASIC1.35□□□□□ -2.19
PCNAP12004 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.35□□□□□ -2.19
PCNAP12004 DNAJC19P9-201ENST00000555084 351 ntBASIC1.35□□□□□ -2.19
PCNAP12004 MIR4764-201ENST00000580680 88 ntBASIC1.35□□□□□ -2.19
PCNAP12004 Z83818.1-201ENST00000603584 150 ntBASIC1.35□□□□□ -2.19
PCNAP12004 MIR26B-201ENST00000362251 77 ntBASIC1.34□□□□□ -2.19
PCNAP12004 U8.1-201ENST00000362843 134 ntBASIC1.34□□□□□ -2.19
PCNAP12004 Y_RNA.121-201ENST00000363309 113 ntBASIC1.34□□□□□ -2.19
PCNAP12004 Y_RNA.242-201ENST00000364473 110 ntBASIC1.34□□□□□ -2.19
PCNAP12004 RNU2-55P-201ENST00000411146 174 ntBASIC1.34□□□□□ -2.19
PCNAP12004 Y_RNA.644-201ENST00000459006 113 ntBASIC1.34□□□□□ -2.19
PCNAP12004 RNU6-1219P-201ENST00000516143 112 ntBASIC1.34□□□□□ -2.19
PCNAP12004 RNU6-830P-201ENST00000516353 107 ntBASIC1.34□□□□□ -2.19
PCNAP12004 Y_RNA.674-201ENST00000516362 113 ntBASIC1.34□□□□□ -2.19
PCNAP12004 RNU6-197P-201ENST00000516680 100 ntBASIC1.34□□□□□ -2.19
PCNAP12004 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.34□□□□□ -2.19
PCNAP12004 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
PCNAP12004 Y_RNA.494-201ENST00000384432 111 ntBASIC1.33□□□□□ -2.2
PCNAP12004 Y_RNA.793-201ENST00000411222 111 ntBASIC1.33□□□□□ -2.2
PCNAP12004 MTND5P15-201ENST00000434246 349 ntBASIC1.33□□□□□ -2.2
PCNAP12004 AC048334.1-201ENST00000477975 159 ntBASIC1.33□□□□□ -2.2
PCNAP12004 RNA5SP153-201ENST00000516498 76 ntBASIC1.33□□□□□ -2.2
PCNAP12004 AL357312.1-201ENST00000603879 298 ntBASIC1.33□□□□□ -2.2
PCNAP12004 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.33□□□□□ -2.2
PCNAP12004 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.33□□□□□ -2.2
PCNAP12004 RNU6-888P-201ENST00000363010 101 ntBASIC1.32□□□□□ -2.2
PCNAP12004 SNORD115-28-201ENST00000363931 81 ntBASIC1.32□□□□□ -2.2
PCNAP12004 RNU6-275P-201ENST00000364910 107 ntBASIC1.32□□□□□ -2.2
PCNAP12004 RNU6-1318P-201ENST00000365389 103 ntBASIC1.32□□□□□ -2.2
PCNAP12004 SNORA1-201ENST00000384107 130 ntBASIC1.32□□□□□ -2.2
PCNAP12004 RNU6-938P-201ENST00000411285 103 ntBASIC1.32□□□□□ -2.2
PCNAP12004 snoU13.23-201ENST00000458863 104 ntBASIC1.32□□□□□ -2.2
PCNAP12004 RNU6-504P-201ENST00000516568 104 ntBASIC1.32□□□□□ -2.2
PCNAP12004 SNORD36C-201ENST00000516733 66 ntBASIC1.32□□□□□ -2.2
PCNAP12004 AP002392.1-201ENST00000537692 208 ntBASIC1.32□□□□□ -2.2
PCNAP12004 AC015712.3-201ENST00000559380 164 ntBASIC1.32□□□□□ -2.2
PCNAP12004 AC097639.2-201ENST00000603159 172 ntBASIC1.32□□□□□ -2.2
PCNAP12004 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.32□□□□□ -2.2
PCNAP12004 ZNF209P-201ENST00000593450 2304 ntBASIC1.32□□□□□ -2.2
PCNAP12004 SNORA25.3-201ENST00000363205 127 ntBASIC1.31□□□□□ -2.2
PCNAP12004 Y_RNA.233-201ENST00000364407 101 ntBASIC1.31□□□□□ -2.2
PCNAP12004 SNORD24-201ENST00000383884 75 ntBASIC1.31□□□□□ -2.2
PCNAP12004 MIR618-201ENST00000385287 98 ntBASIC1.31□□□□□ -2.2
PCNAP12004 AF228730.3-201ENST00000436691 102 ntBASIC1.31□□□□□ -2.2
PCNAP12004 RPL39P39-201ENST00000455840 151 ntBASIC1.31□□□□□ -2.2
PCNAP12004 AL353997.5-201ENST00000618886 171 ntBASIC1.31□□□□□ -2.2
PCNAP12004 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.31□□□□□ -2.2
PCNAP12004 RNA5SP327-201ENST00000362494 101 ntBASIC1.3□□□□□ -2.2
PCNAP12004 Y_RNA.37-201ENST00000362606 108 ntBASIC1.3□□□□□ -2.2
PCNAP12004 SNORA17.3-201ENST00000391159 129 ntBASIC1.3□□□□□ -2.2
PCNAP12004 SNORA26-201ENST00000391286 122 ntBASIC1.3□□□□□ -2.2
PCNAP12004 SNORA79-201ENST00000408376 140 ntBASIC1.3□□□□□ -2.2
PCNAP12004 RNU4-43P-201ENST00000410628 137 ntBASIC1.3□□□□□ -2.2
PCNAP12004 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.3□□□□□ -2.2
PCNAP12004 SNORA31.2-201ENST00000516019 134 ntBASIC1.3□□□□□ -2.2
PCNAP12004 RNU7-43P-201ENST00000516554 64 ntBASIC1.3□□□□□ -2.2
PCNAP12004 AC008133.2-201ENST00000624540 351 ntBASIC1.3□□□□□ -2.2
PCNAP12004 Y_RNA.75-201ENST00000362927 97 ntBASIC1.29□□□□□ -2.2
PCNAP12004 RNA5SP99-201ENST00000364020 114 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms