Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 Y_RNA.582-201ENST00000391023 95 ntBASIC-3.5□□□□□ -2.97
TOP2AP11388 AC018865.2-201ENST00000423631 129 ntBASIC-3.5□□□□□ -2.97
TOP2AP11388 SCARNA17.3-201ENST00000516381 125 ntBASIC-3.5□□□□□ -2.97
TOP2AP11388 MTND1P24-201ENST00000552175 861 ntBASIC-3.5□□□□□ -2.97
TOP2AP11388 MIR466-201ENST00000580653 84 ntBASIC-3.5□□□□□ -2.97
TOP2AP11388 SNORD115-29-201ENST00000362834 82 ntBASIC-3.51□□□□□ -2.97
TOP2AP11388 SNORD115-11-201ENST00000363616 82 ntBASIC-3.51□□□□□ -2.97
TOP2AP11388 SNORD115-22-201ENST00000364456 82 ntBASIC-3.51□□□□□ -2.97
TOP2AP11388 Y_RNA.340-201ENST00000365330 92 ntBASIC-3.51□□□□□ -2.97
TOP2AP11388 RNU6-117P-201ENST00000365415 107 ntBASIC-3.51□□□□□ -2.97
TOP2AP11388 SNORD115-43-201ENST00000365503 82 ntBASIC-3.51□□□□□ -2.97
TOP2AP11388 SNORD115-36-201ENST00000365629 82 ntBASIC-3.51□□□□□ -2.97
TOP2AP11388 RNU6-949P-201ENST00000384040 107 ntBASIC-3.51□□□□□ -2.97
TOP2AP11388 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.51□□□□□ -2.97
TOP2AP11388 MIR548H3-201ENST00000408771 118 ntBASIC-3.51□□□□□ -2.97
TOP2AP11388 AL137792.2-201ENST00000443484 235 ntBASIC-3.51□□□□□ -2.97
TOP2AP11388 MIR548H5-201ENST00000580314 60 ntBASIC-3.51□□□□□ -2.97
TOP2AP11388 TUSC7.1-201ENST00000610969 165 ntBASIC-3.51□□□□□ -2.97
TOP2AP11388 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-3.51□□□□□ -2.97
TOP2AP11388 AL353691.2-201ENST00000443795 59 ntBASIC-3.52□□□□□ -2.97
TOP2AP11388 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-3.52□□□□□ -2.97
TOP2AP11388 RNU6-1333P-201ENST00000516162 93 ntBASIC-3.52□□□□□ -2.97
TOP2AP11388 AC009159.2-201ENST00000617603 606 ntBASIC-3.52□□□□□ -2.97
TOP2AP11388 RNU6-371P-201ENST00000364283 108 ntBASIC-3.53□□□□□ -2.97
TOP2AP11388 RNU6-190P-201ENST00000384154 102 ntBASIC-3.53□□□□□ -2.97
TOP2AP11388 Y_RNA.461-201ENST00000384263 103 ntBASIC-3.53□□□□□ -2.97
TOP2AP11388 MIR217-201ENST00000384817 110 ntBASIC-3.53□□□□□ -2.97
TOP2AP11388 MIR181A1-201ENST00000385026 110 ntBASIC-3.53□□□□□ -2.97
TOP2AP11388 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-3.53□□□□□ -2.97
TOP2AP11388 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-3.53□□□□□ -2.97
TOP2AP11388 SNRPGP14-201ENST00000435400 219 ntBASIC-3.53□□□□□ -2.97
TOP2AP11388 DEFB108A-201ENST00000530110 222 ntBASIC-3.53□□□□□ -2.97
TOP2AP11388 MIR4464-201ENST00000580818 92 ntBASIC-3.53□□□□□ -2.97
TOP2AP11388 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-3.53□□□□□ -2.97
TOP2AP11388 AC080013.3-201ENST00000606839 578 ntBASIC-3.53□□□□□ -2.97
TOP2AP11388 MIR6773-201ENST00000612812 74 ntBASIC-3.53□□□□□ -2.97
TOP2AP11388 RNU6-216P-201ENST00000363282 104 ntBASIC-3.54□□□□□ -2.98
TOP2AP11388 RNU6-245P-201ENST00000384020 107 ntBASIC-3.54□□□□□ -2.98
TOP2AP11388 AC141846.1-201ENST00000568348 142 ntBASIC-3.54□□□□□ -2.98
TOP2AP11388 RNU6-268P-201ENST00000364174 107 ntBASIC-3.54□□□□□ -2.98
TOP2AP11388 MTND4P18-201ENST00000447010 465 ntBASIC-3.54□□□□□ -2.98
TOP2AP11388 MIR548AG2-201ENST00000581228 64 ntBASIC-3.54□□□□□ -2.98
TOP2AP11388 RMST_10.1-201ENST00000616309 154 ntBASIC-3.54□□□□□ -2.98
TOP2AP11388 RNU6-946P-201ENST00000383878 107 ntBASIC-3.55□□□□□ -2.98
TOP2AP11388 RNU6-442P-201ENST00000383968 104 ntBASIC-3.55□□□□□ -2.98
TOP2AP11388 RNU7-136P-201ENST00000458819 69 ntBASIC-3.55□□□□□ -2.98
TOP2AP11388 MIR4490-201ENST00000582647 84 ntBASIC-3.55□□□□□ -2.98
TOP2AP11388 MIR6888-201ENST00000621977 67 ntBASIC-3.55□□□□□ -2.98
TOP2AP11388 AL354751.2-201ENST00000415471 210 ntBASIC-3.56□□□□□ -2.98
TOP2AP11388 RNU6-1208P-201ENST00000459588 107 ntBASIC-3.56□□□□□ -2.98
TOP2AP11388 AC097510.1-201ENST00000510945 133 ntBASIC-3.56□□□□□ -2.98
TOP2AP11388 SNORA27.1-201ENST00000362604 124 ntBASIC-3.57□□□□□ -2.98
TOP2AP11388 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-3.57□□□□□ -2.98
TOP2AP11388 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-3.57□□□□□ -2.98
TOP2AP11388 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-3.57□□□□□ -2.98
TOP2AP11388 MTCO1P29-201ENST00000496868 288 ntBASIC-3.57□□□□□ -2.98
TOP2AP11388 RNU6-966P-201ENST00000516479 104 ntBASIC-3.57□□□□□ -2.98
TOP2AP11388 AC109347.2-201ENST00000610220 349 ntBASIC-3.57□□□□□ -2.98
TOP2AP11388 AC133104.2-201ENST00000615272 193 ntBASIC-3.57□□□□□ -2.98
TOP2AP11388 AC139792.3-201ENST00000623525 224 ntBASIC-3.57□□□□□ -2.98
TOP2AP11388 Y_RNA.22-201ENST00000362492 102 ntBASIC-3.58□□□□□ -2.98
TOP2AP11388 Y_RNA.505-201ENST00000384489 102 ntBASIC-3.58□□□□□ -2.98
TOP2AP11388 RNU6-337P-201ENST00000391243 106 ntBASIC-3.58□□□□□ -2.98
TOP2AP11388 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-3.58□□□□□ -2.98
TOP2AP11388 FGF7P4-201ENST00000509595 295 ntBASIC-3.58□□□□□ -2.98
TOP2AP11388 RNU6-998P-201ENST00000515894 101 ntBASIC-3.58□□□□□ -2.98
TOP2AP11388 SNORD115-39-201ENST00000363694 82 ntBASIC-3.59□□□□□ -2.98
TOP2AP11388 Y_RNA.257-201ENST00000364596 102 ntBASIC-3.59□□□□□ -2.98
TOP2AP11388 MIR7-1-201ENST00000384871 110 ntBASIC-3.59□□□□□ -2.98
TOP2AP11388 UBE2D3P4-201ENST00000441973 436 ntBASIC-3.59□□□□□ -2.98
TOP2AP11388 MIR4748-201ENST00000578076 82 ntBASIC-3.59□□□□□ -2.98
TOP2AP11388 AC027807.2-201ENST00000616099 408 ntBASIC-3.59□□□□□ -2.98
TOP2AP11388 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-3.59□□□□□ -2.98
TOP2AP11388 5S_rRNA.13-201ENST00000622298 123 ntBASIC-3.59□□□□□ -2.98
TOP2AP11388 AC002542.1-201ENST00000440683 193 ntBASIC-3.6□□□□□ -2.98
TOP2AP11388 AC104563.1-201ENST00000476147 376 ntBASIC-3.6□□□□□ -2.98
TOP2AP11388 RNU6-1006P-201ENST00000516998 103 ntBASIC-3.6□□□□□ -2.98
TOP2AP11388 AC007012.1-201ENST00000567192 175 ntBASIC-3.6□□□□□ -2.98
TOP2AP11388 RNU4-75P-201ENST00000364621 146 ntBASIC-3.6□□□□□ -2.99
TOP2AP11388 RNU6-80P-201ENST00000384195 107 ntBASIC-3.6□□□□□ -2.99
TOP2AP11388 RNU6-21P-201ENST00000384710 107 ntBASIC-3.6□□□□□ -2.99
TOP2AP11388 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-3.6□□□□□ -2.99
TOP2AP11388 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-3.6□□□□□ -2.99
TOP2AP11388 RNU2-14P-201ENST00000411053 191 ntBASIC-3.6□□□□□ -2.99
TOP2AP11388 SNORA25.10-201ENST00000515926 124 ntBASIC-3.6□□□□□ -2.99
TOP2AP11388 RNU7-10P-201ENST00000607194 63 ntBASIC-3.6□□□□□ -2.99
TOP2AP11388 Y_RNA.481-201ENST00000384373 102 ntBASIC-3.61□□□□□ -2.99
TOP2AP11388 Y_RNA.501-201ENST00000384467 103 ntBASIC-3.61□□□□□ -2.99
TOP2AP11388 SNORD65.1-201ENST00000390889 71 ntBASIC-3.61□□□□□ -2.99
TOP2AP11388 MTCO3P39-201ENST00000514812 518 ntBASIC-3.61□□□□□ -2.99
TOP2AP11388 AC137590.2-201ENST00000619709 240 ntBASIC-3.61□□□□□ -2.99
TOP2AP11388 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-3.62□□□□□ -2.99
TOP2AP11388 Y_RNA.91-201ENST00000363042 107 ntBASIC-3.62□□□□□ -2.99
TOP2AP11388 Y_RNA.135-201ENST00000363439 95 ntBASIC-3.62□□□□□ -2.99
TOP2AP11388 RNU6-1264P-201ENST00000383891 107 ntBASIC-3.62□□□□□ -2.99
TOP2AP11388 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-3.62□□□□□ -2.99
TOP2AP11388 AC068137.4-201ENST00000638485 296 ntBASIC-3.62□□□□□ -2.99
TOP2AP11388 RNA5SP133-201ENST00000363368 119 ntBASIC-3.63□□□□□ -2.99
TOP2AP11388 RNU6-744P-201ENST00000365557 107 ntBASIC-3.63□□□□□ -2.99
TOP2AP11388 RNU6-1316P-201ENST00000384242 108 ntBASIC-3.63□□□□□ -2.99
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms