Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 SNORD48-201ENST00000364953 64 ntBASIC2.1□□□□□ -2.07
SNRPA1P09661 snoU2-30.1-201ENST00000365012 70 ntBASIC2.1□□□□□ -2.07
SNRPA1P09661 RNU6-81P-201ENST00000365608 104 ntBASIC2.1□□□□□ -2.07
SNRPA1P09661 RNU6-296P-201ENST00000384608 107 ntBASIC2.1□□□□□ -2.07
SNRPA1P09661 Y_RNA.542-201ENST00000384641 111 ntBASIC2.1□□□□□ -2.07
SNRPA1P09661 MTND4LP9-201ENST00000427694 174 ntBASIC2.1□□□□□ -2.07
SNRPA1P09661 CALM2P4-201ENST00000430810 426 ntBASIC2.1□□□□□ -2.07
SNRPA1P09661 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.1□□□□□ -2.07
SNRPA1P09661 RNU6-504P-201ENST00000516568 104 ntBASIC2.1□□□□□ -2.07
SNRPA1P09661 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.1□□□□□ -2.07
SNRPA1P09661 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SNRPA1P09661 RNA5SP276-201ENST00000362580 94 ntBASIC2.09□□□□□ -2.07
SNRPA1P09661 SNORA1-201ENST00000384107 130 ntBASIC2.09□□□□□ -2.07
SNRPA1P09661 SNORA40-201ENST00000388090 126 ntBASIC2.09□□□□□ -2.07
SNRPA1P09661 RN7SKP200-201ENST00000410564 320 ntBASIC2.09□□□□□ -2.07
SNRPA1P09661 AC114811.1-201ENST00000507207 168 ntBASIC2.09□□□□□ -2.07
SNRPA1P09661 MIR3129-201ENST00000581095 76 ntBASIC2.09□□□□□ -2.07
SNRPA1P09661 SNORA28-201ENST00000606769 126 ntBASIC2.09□□□□□ -2.07
SNRPA1P09661 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.08□□□□□ -2.08
SNRPA1P09661 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SNRPA1P09661 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SNRPA1P09661 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SNRPA1P09661 MIRLET7C-201ENST00000362160 84 ntBASIC2.08□□□□□ -2.08
SNRPA1P09661 SNORD113-1-201ENST00000365321 69 ntBASIC2.08□□□□□ -2.08
SNRPA1P09661 RNU6-442P-201ENST00000383968 104 ntBASIC2.08□□□□□ -2.08
SNRPA1P09661 RNU6-163P-201ENST00000384396 106 ntBASIC2.08□□□□□ -2.08
SNRPA1P09661 MIR548A2-201ENST00000384956 97 ntBASIC2.08□□□□□ -2.08
SNRPA1P09661 AL034345.1-201ENST00000407768 123 ntBASIC2.08□□□□□ -2.08
SNRPA1P09661 SNRPGP13-201ENST00000442212 177 ntBASIC2.08□□□□□ -2.08
SNRPA1P09661 RNU7-34P-201ENST00000459394 64 ntBASIC2.08□□□□□ -2.08
SNRPA1P09661 RNU6-693P-201ENST00000516134 107 ntBASIC2.08□□□□□ -2.08
SNRPA1P09661 U1.36-201ENST00000620684 176 ntBASIC2.08□□□□□ -2.08
SNRPA1P09661 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.08□□□□□ -2.08
SNRPA1P09661 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.08□□□□□ -2.08
SNRPA1P09661 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.08□□□□□ -2.08
SNRPA1P09661 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SNRPA1P09661 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.07□□□□□ -2.08
SNRPA1P09661 RNU6-888P-201ENST00000363010 101 ntBASIC2.07□□□□□ -2.08
SNRPA1P09661 SNORD24-201ENST00000383884 75 ntBASIC2.07□□□□□ -2.08
SNRPA1P09661 RNU6-950P-201ENST00000384651 107 ntBASIC2.07□□□□□ -2.08
SNRPA1P09661 RNU6-1031P-201ENST00000384773 107 ntBASIC2.07□□□□□ -2.08
SNRPA1P09661 Y_RNA.584-201ENST00000391090 114 ntBASIC2.07□□□□□ -2.08
SNRPA1P09661 U8.16-201ENST00000391279 133 ntBASIC2.07□□□□□ -2.08
SNRPA1P09661 RNA5SP100-201ENST00000410903 110 ntBASIC2.07□□□□□ -2.08
SNRPA1P09661 RNA5SP59-201ENST00000410922 110 ntBASIC2.07□□□□□ -2.08
SNRPA1P09661 RPL23AP6-201ENST00000446637 472 ntBASIC2.07□□□□□ -2.08
SNRPA1P09661 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.07□□□□□ -2.08
SNRPA1P09661 DNAJC19P9-201ENST00000555084 351 ntBASIC2.07□□□□□ -2.08
SNRPA1P09661 MIR4299-201ENST00000577899 72 ntBASIC2.07□□□□□ -2.08
SNRPA1P09661 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.07□□□□□ -2.08
SNRPA1P09661 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.07□□□□□ -2.08
SNRPA1P09661 Y_RNA.164-201ENST00000363709 102 ntBASIC2.06□□□□□ -2.08
SNRPA1P09661 RNU6-268P-201ENST00000364174 107 ntBASIC2.06□□□□□ -2.08
SNRPA1P09661 Y_RNA.242-201ENST00000364473 110 ntBASIC2.06□□□□□ -2.08
SNRPA1P09661 RNU6-915P-201ENST00000364943 103 ntBASIC2.06□□□□□ -2.08
SNRPA1P09661 RNU6-959P-201ENST00000384671 107 ntBASIC2.06□□□□□ -2.08
SNRPA1P09661 MIR518F-201ENST00000384973 87 ntBASIC2.06□□□□□ -2.08
SNRPA1P09661 MIR548O-201ENST00000408583 114 ntBASIC2.06□□□□□ -2.08
SNRPA1P09661 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.06□□□□□ -2.08
SNRPA1P09661 SNRPGP14-201ENST00000435400 219 ntBASIC2.06□□□□□ -2.08
SNRPA1P09661 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.06□□□□□ -2.08
SNRPA1P09661 RNU7-95P-201ENST00000459222 64 ntBASIC2.06□□□□□ -2.08
SNRPA1P09661 SNORA18.4-201ENST00000516440 124 ntBASIC2.06□□□□□ -2.08
SNRPA1P09661 RNA5SP168-201ENST00000516642 112 ntBASIC2.06□□□□□ -2.08
SNRPA1P09661 RNU6-971P-201ENST00000516920 106 ntBASIC2.06□□□□□ -2.08
SNRPA1P09661 SNORD53B-201ENST00000577887 78 ntBASIC2.06□□□□□ -2.08
SNRPA1P09661 AL365205.2-201ENST00000594586 68 ntBASIC2.06□□□□□ -2.08
SNRPA1P09661 AL645939.4-201ENST00000604495 135 ntBASIC2.06□□□□□ -2.08
SNRPA1P09661 AL773524.1-201ENST00000614065 229 ntBASIC2.06□□□□□ -2.08
SNRPA1P09661 RNU6-60P-201ENST00000364792 103 ntBASIC2.05□□□□□ -2.08
SNRPA1P09661 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SNRPA1P09661 MIR676-201ENST00000390702 67 ntBASIC2.05□□□□□ -2.08
SNRPA1P09661 HMGN2P38-201ENST00000423806 265 ntBASIC2.05□□□□□ -2.08
SNRPA1P09661 RNU6-1211P-201ENST00000459179 105 ntBASIC2.05□□□□□ -2.08
SNRPA1P09661 CYCTP-201ENST00000504253 315 ntBASIC2.05□□□□□ -2.08
SNRPA1P09661 RNU7-25P-201ENST00000516544 62 ntBASIC2.05□□□□□ -2.08
SNRPA1P09661 Y_RNA.686-201ENST00000516548 134 ntBASIC2.05□□□□□ -2.08
SNRPA1P09661 SNORA31.17-201ENST00000516953 127 ntBASIC2.05□□□□□ -2.08
SNRPA1P09661 AP001328.1-201ENST00000528550 176 ntBASIC2.05□□□□□ -2.08
SNRPA1P09661 MIR4709-201ENST00000577272 72 ntBASIC2.05□□□□□ -2.08
SNRPA1P09661 AL512598.1-201ENST00000610158 273 ntBASIC2.05□□□□□ -2.08
SNRPA1P09661 AC006441.5-201ENST00000612680 209 ntBASIC2.05□□□□□ -2.08
SNRPA1P09661 U8.1-201ENST00000362843 134 ntBASIC2.04□□□□□ -2.08
SNRPA1P09661 RNU1-42P-201ENST00000364033 160 ntBASIC2.04□□□□□ -2.08
SNRPA1P09661 Y_RNA.336-201ENST00000365307 109 ntBASIC2.04□□□□□ -2.08
SNRPA1P09661 RNU6-424P-201ENST00000384367 105 ntBASIC2.04□□□□□ -2.08
SNRPA1P09661 RNA5SP127-201ENST00000411051 133 ntBASIC2.04□□□□□ -2.08
SNRPA1P09661 AC244636.1-201ENST00000421152 228 ntBASIC2.04□□□□□ -2.08
SNRPA1P09661 snoU13.27-201ENST00000459278 104 ntBASIC2.04□□□□□ -2.08
SNRPA1P09661 RN7SL274P-201ENST00000492268 272 ntBASIC2.04□□□□□ -2.08
SNRPA1P09661 RNA5SP364-201ENST00000516938 78 ntBASIC2.04□□□□□ -2.08
SNRPA1P09661 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SNRPA1P09661 AC131055.1-201ENST00000584626 316 ntBASIC2.04□□□□□ -2.08
SNRPA1P09661 AC011603.4-201ENST00000611325 277 ntBASIC2.04□□□□□ -2.08
SNRPA1P09661 AC021506.2-201ENST00000612354 169 ntBASIC2.04□□□□□ -2.08
SNRPA1P09661 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SNRPA1P09661 RNU4-52P-201ENST00000384209 138 ntBASIC2.03□□□□□ -2.08
SNRPA1P09661 MIR624-201ENST00000385217 97 ntBASIC2.03□□□□□ -2.08
SNRPA1P09661 RNA5SP212-201ENST00000391223 107 ntBASIC2.03□□□□□ -2.08
SNRPA1P09661 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 244.5 ms