Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 7SK.13-201ENST00000622040 250 ntBASIC1.19□□□□□ -2.22
VTNP04004 MIR26B-201ENST00000362251 77 ntBASIC1.18□□□□□ -2.22
VTNP04004 Y_RNA.262-201ENST00000364641 102 ntBASIC1.18□□□□□ -2.22
VTNP04004 Y_RNA.304-201ENST00000365011 112 ntBASIC1.18□□□□□ -2.22
VTNP04004 Y_RNA.478-201ENST00000384358 107 ntBASIC1.18□□□□□ -2.22
VTNP04004 Y_RNA.539-201ENST00000384635 107 ntBASIC1.18□□□□□ -2.22
VTNP04004 MIR150-201ENST00000385048 84 ntBASIC1.18□□□□□ -2.22
VTNP04004 MIR653-201ENST00000385279 96 ntBASIC1.18□□□□□ -2.22
VTNP04004 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
VTNP04004 AC100767.1-201ENST00000528178 123 ntBASIC1.18□□□□□ -2.22
VTNP04004 AL160236.1-201ENST00000556317 195 ntBASIC1.18□□□□□ -2.22
VTNP04004 GHRLOS.1-201ENST00000610995 70 ntBASIC1.18□□□□□ -2.22
VTNP04004 AC015726.2-201ENST00000620112 122 ntBASIC1.18□□□□□ -2.22
VTNP04004 MIR8065-201ENST00000620577 100 ntBASIC1.18□□□□□ -2.22
VTNP04004 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
VTNP04004 RNU6-268P-201ENST00000364174 107 ntBASIC1.17□□□□□ -2.22
VTNP04004 RNU6-923P-201ENST00000364753 107 ntBASIC1.17□□□□□ -2.22
VTNP04004 Y_RNA.308-201ENST00000365043 101 ntBASIC1.17□□□□□ -2.22
VTNP04004 MIR520E-201ENST00000384867 87 ntBASIC1.17□□□□□ -2.22
VTNP04004 MIR518E-201ENST00000385252 88 ntBASIC1.17□□□□□ -2.22
VTNP04004 SNORD41-201ENST00000386967 70 ntBASIC1.17□□□□□ -2.22
VTNP04004 Y_RNA.622-201ENST00000411091 108 ntBASIC1.17□□□□□ -2.22
VTNP04004 RNU6-453P-201ENST00000516819 85 ntBASIC1.17□□□□□ -2.22
VTNP04004 RNU6-165P-201ENST00000517170 99 ntBASIC1.17□□□□□ -2.22
VTNP04004 RNU6-111P-201ENST00000517179 105 ntBASIC1.17□□□□□ -2.22
VTNP04004 SNORD114-21-201ENST00000606412 72 ntBASIC1.17□□□□□ -2.22
VTNP04004 Y_RNA.20-201ENST00000362479 113 ntBASIC1.16□□□□□ -2.22
VTNP04004 RNA5SP327-201ENST00000362494 101 ntBASIC1.16□□□□□ -2.22
VTNP04004 Y_RNA.199-201ENST00000364014 102 ntBASIC1.16□□□□□ -2.22
VTNP04004 snoU2_19.4-201ENST00000364329 80 ntBASIC1.16□□□□□ -2.22
VTNP04004 RNU6-493P-201ENST00000391321 108 ntBASIC1.16□□□□□ -2.22
VTNP04004 RPS23P4-201ENST00000487908 423 ntBASIC1.16□□□□□ -2.22
VTNP04004 RNU6-1023P-201ENST00000516137 106 ntBASIC1.16□□□□□ -2.22
VTNP04004 RNU6-1271P-201ENST00000517049 105 ntBASIC1.16□□□□□ -2.22
VTNP04004 SNORA4-201ENST00000584302 138 ntBASIC1.16□□□□□ -2.22
VTNP04004 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
VTNP04004 Y_RNA.118-201ENST00000363300 101 ntBASIC1.15□□□□□ -2.23
VTNP04004 Y_RNA.188-201ENST00000363952 111 ntBASIC1.15□□□□□ -2.23
VTNP04004 Y_RNA.242-201ENST00000364473 110 ntBASIC1.15□□□□□ -2.23
VTNP04004 Y_RNA.401-201ENST00000383965 117 ntBASIC1.15□□□□□ -2.23
VTNP04004 Y_RNA.486-201ENST00000384398 107 ntBASIC1.15□□□□□ -2.23
VTNP04004 MIR222-201ENST00000384992 110 ntBASIC1.15□□□□□ -2.23
VTNP04004 AL606845.1-201ENST00000404881 255 ntBASIC1.15□□□□□ -2.23
VTNP04004 RPL39P39-201ENST00000455840 151 ntBASIC1.15□□□□□ -2.23
VTNP04004 RPS29P1-201ENST00000465274 159 ntBASIC1.15□□□□□ -2.23
VTNP04004 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.15□□□□□ -2.23
VTNP04004 SCARNA8-201ENST00000515924 131 ntBASIC1.15□□□□□ -2.23
VTNP04004 RN7SKP164-201ENST00000516138 266 ntBASIC1.15□□□□□ -2.23
VTNP04004 Y_RNA.666-201ENST00000516187 112 ntBASIC1.15□□□□□ -2.23
VTNP04004 MIR5688-201ENST00000580619 83 ntBASIC1.15□□□□□ -2.23
VTNP04004 AL021707.8-201ENST00000609428 183 ntBASIC1.15□□□□□ -2.23
VTNP04004 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.15□□□□□ -2.23
VTNP04004 MIR7111-201ENST00000619751 72 ntBASIC1.15□□□□□ -2.23
VTNP04004 RNU6-653P-201ENST00000363074 106 ntBASIC1.14□□□□□ -2.23
VTNP04004 RNY4P28-201ENST00000365281 93 ntBASIC1.14□□□□□ -2.23
VTNP04004 RNU4-17P-201ENST00000365598 141 ntBASIC1.14□□□□□ -2.23
VTNP04004 Y_RNA.489-201ENST00000384410 101 ntBASIC1.14□□□□□ -2.23
VTNP04004 MIR520C-201ENST00000385005 87 ntBASIC1.14□□□□□ -2.23
VTNP04004 Y_RNA.626-201ENST00000411288 95 ntBASIC1.14□□□□□ -2.23
VTNP04004 SNORD123-201ENST00000459473 70 ntBASIC1.14□□□□□ -2.23
VTNP04004 AC019288.1-201ENST00000557918 224 ntBASIC1.14□□□□□ -2.23
VTNP04004 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.14□□□□□ -2.23
VTNP04004 AL357312.1-201ENST00000603879 298 ntBASIC1.14□□□□□ -2.23
VTNP04004 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.14□□□□□ -2.23
VTNP04004 MIR616-201ENST00000385293 97 ntBASIC1.13□□□□□ -2.23
VTNP04004 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
VTNP04004 RNU2-70P-201ENST00000410718 179 ntBASIC1.13□□□□□ -2.23
VTNP04004 Y_RNA.618-201ENST00000410949 107 ntBASIC1.13□□□□□ -2.23
VTNP04004 SNRPGP14-201ENST00000435400 219 ntBASIC1.13□□□□□ -2.23
VTNP04004 AL133373.1-201ENST00000497098 94 ntBASIC1.13□□□□□ -2.23
VTNP04004 RN7SKP179-201ENST00000516126 217 ntBASIC1.13□□□□□ -2.23
VTNP04004 SNORD77.4-201ENST00000516158 81 ntBASIC1.13□□□□□ -2.23
VTNP04004 RNU6-1299P-201ENST00000516316 100 ntBASIC1.13□□□□□ -2.23
VTNP04004 SNORD111.1-201ENST00000516421 86 ntBASIC1.13□□□□□ -2.23
VTNP04004 SNORA74.3-201ENST00000517108 154 ntBASIC1.13□□□□□ -2.23
VTNP04004 RNU7-181P-201ENST00000517234 74 ntBASIC1.13□□□□□ -2.23
VTNP04004 AC011921.3-201ENST00000605540 361 ntBASIC1.13□□□□□ -2.23
VTNP04004 SNORA25.8-201ENST00000364831 128 ntBASIC1.12□□□□□ -2.23
VTNP04004 RNU6-1138P-201ENST00000365359 106 ntBASIC1.12□□□□□ -2.23
VTNP04004 MIR15B-201ENST00000385045 98 ntBASIC1.12□□□□□ -2.23
VTNP04004 RNU6-381P-201ENST00000391259 108 ntBASIC1.12□□□□□ -2.23
VTNP04004 U8.17-201ENST00000391292 132 ntBASIC1.12□□□□□ -2.23
VTNP04004 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.12□□□□□ -2.23
VTNP04004 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.12□□□□□ -2.23
VTNP04004 SNRPGP8-201ENST00000454064 226 ntBASIC1.12□□□□□ -2.23
VTNP04004 RNU6-693P-201ENST00000516134 107 ntBASIC1.12□□□□□ -2.23
VTNP04004 RNU4-71P-201ENST00000516258 113 ntBASIC1.12□□□□□ -2.23
VTNP04004 RNU7-25P-201ENST00000516544 62 ntBASIC1.12□□□□□ -2.23
VTNP04004 RNU6-113P-201ENST00000516653 101 ntBASIC1.12□□□□□ -2.23
VTNP04004 MIR4662B-201ENST00000579498 81 ntBASIC1.12□□□□□ -2.23
VTNP04004 AL078603.1-201ENST00000603824 313 ntBASIC1.12□□□□□ -2.23
VTNP04004 RNU2-4P-201ENST00000606190 192 ntBASIC1.12□□□□□ -2.23
VTNP04004 AC006441.5-201ENST00000612680 209 ntBASIC1.12□□□□□ -2.23
VTNP04004 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
VTNP04004 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
VTNP04004 RNU4-38P-201ENST00000364472 129 ntBASIC1.11□□□□□ -2.23
VTNP04004 MIR570-201ENST00000384917 97 ntBASIC1.11□□□□□ -2.23
VTNP04004 MIR548O-201ENST00000408583 114 ntBASIC1.11□□□□□ -2.23
VTNP04004 AC048334.1-201ENST00000477975 159 ntBASIC1.11□□□□□ -2.23
VTNP04004 RNU6-561P-201ENST00000516222 102 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms