Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RNU6-792P-201ENST00000363490 107 ntBASIC-0.96□□□□□ -2.56
SPTA1P02549 RNU6-224P-201ENST00000384055 107 ntBASIC-0.96□□□□□ -2.56
SPTA1P02549 MIR626-201ENST00000385032 94 ntBASIC-0.96□□□□□ -2.56
SPTA1P02549 SNORA26.6-201ENST00000391256 115 ntBASIC-0.96□□□□□ -2.56
SPTA1P02549 RNA5SP237-201ENST00000410414 113 ntBASIC-0.96□□□□□ -2.56
SPTA1P02549 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.96□□□□□ -2.56
SPTA1P02549 MTND2P3-201ENST00000452458 470 ntBASIC-0.96□□□□□ -2.56
SPTA1P02549 MTND4LP18-201ENST00000526864 291 ntBASIC-0.96□□□□□ -2.56
SPTA1P02549 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.96□□□□□ -2.56
SPTA1P02549 HULC.1-201ENST00000612720 240 ntBASIC-0.96□□□□□ -2.56
SPTA1P02549 MIR8068-201ENST00000618032 68 ntBASIC-0.96□□□□□ -2.56
SPTA1P02549 U6.115-201ENST00000636045 103 ntBASIC-0.96□□□□□ -2.56
SPTA1P02549 MRPL42P2-201ENST00000403169 426 ntBASIC-0.97□□□□□ -2.56
SPTA1P02549 MTND3P23-201ENST00000431980 347 ntBASIC-0.97□□□□□ -2.56
SPTA1P02549 SNORA40.9-201ENST00000515895 93 ntBASIC-0.97□□□□□ -2.56
SPTA1P02549 RNU2-69P-201ENST00000516061 100 ntBASIC-0.97□□□□□ -2.56
SPTA1P02549 RNU6-334P-201ENST00000517072 102 ntBASIC-0.97□□□□□ -2.56
SPTA1P02549 AC087752.4-201ENST00000605911 462 ntBASIC-0.97□□□□□ -2.56
SPTA1P02549 uc_338.19-201ENST00000616808 99 ntBASIC-0.97□□□□□ -2.56
SPTA1P02549 AL445584.3-201ENST00000617173 78 ntBASIC-0.97□□□□□ -2.56
SPTA1P02549 MIR410-201ENST00000362222 80 ntBASIC-0.97□□□□□ -2.57
SPTA1P02549 RNU6-454P-201ENST00000364292 107 ntBASIC-0.97□□□□□ -2.57
SPTA1P02549 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.97□□□□□ -2.57
SPTA1P02549 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.97□□□□□ -2.57
SPTA1P02549 AL500527.2-201ENST00000454105 95 ntBASIC-0.97□□□□□ -2.57
SPTA1P02549 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.97□□□□□ -2.57
SPTA1P02549 RNU7-13P-201ENST00000516413 62 ntBASIC-0.97□□□□□ -2.57
SPTA1P02549 AC245014.2-201ENST00000603689 287 ntBASIC-0.97□□□□□ -2.57
SPTA1P02549 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.98□□□□□ -2.57
SPTA1P02549 Y_RNA.367-201ENST00000365544 101 ntBASIC-0.98□□□□□ -2.57
SPTA1P02549 RNU6-949P-201ENST00000384040 107 ntBASIC-0.98□□□□□ -2.57
SPTA1P02549 SNORD12C-201ENST00000386307 89 ntBASIC-0.98□□□□□ -2.57
SPTA1P02549 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.98□□□□□ -2.57
SPTA1P02549 RNU7-96P-201ENST00000459535 64 ntBASIC-0.98□□□□□ -2.57
SPTA1P02549 AC011373.1-201ENST00000607270 237 ntBASIC-0.98□□□□□ -2.57
SPTA1P02549 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.98□□□□□ -2.57
SPTA1P02549 RNA5SP475-201ENST00000410568 110 ntBASIC-0.98□□□□□ -2.57
SPTA1P02549 USMG5P1-201ENST00000425964 177 ntBASIC-0.98□□□□□ -2.57
SPTA1P02549 USP9YP30-201ENST00000430729 455 ntBASIC-0.98□□□□□ -2.57
SPTA1P02549 FCF1P4-201ENST00000448326 183 ntBASIC-0.98□□□□□ -2.57
SPTA1P02549 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.98□□□□□ -2.57
SPTA1P02549 SCARNA18B-201ENST00000458806 135 ntBASIC-0.98□□□□□ -2.57
SPTA1P02549 SNORA25.10-201ENST00000515926 124 ntBASIC-0.98□□□□□ -2.57
SPTA1P02549 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.98□□□□□ -2.57
SPTA1P02549 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.98□□□□□ -2.57
SPTA1P02549 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.98□□□□□ -2.57
SPTA1P02549 SCOCP1-201ENST00000554676 349 ntBASIC-0.98□□□□□ -2.57
SPTA1P02549 AL080274.1-201ENST00000605565 220 ntBASIC-0.98□□□□□ -2.57
SPTA1P02549 AC080013.3-201ENST00000606839 578 ntBASIC-0.98□□□□□ -2.57
SPTA1P02549 AC069503.3-201ENST00000618674 145 ntBASIC-0.98□□□□□ -2.57
SPTA1P02549 RNU4-20P-201ENST00000365601 151 ntBASIC-0.99□□□□□ -2.57
SPTA1P02549 RNU4-70P-201ENST00000384579 139 ntBASIC-0.99□□□□□ -2.57
SPTA1P02549 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.99□□□□□ -2.57
SPTA1P02549 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.99□□□□□ -2.57
SPTA1P02549 RNU6-201P-201ENST00000517100 61 ntBASIC-0.99□□□□□ -2.57
SPTA1P02549 MIR548H5-201ENST00000580314 60 ntBASIC-0.99□□□□□ -2.57
SPTA1P02549 Z84480.1-201ENST00000605131 311 ntBASIC-0.99□□□□□ -2.57
SPTA1P02549 AC027807.2-201ENST00000616099 408 ntBASIC-0.99□□□□□ -2.57
SPTA1P02549 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.99□□□□□ -2.57
SPTA1P02549 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.99□□□□□ -2.57
SPTA1P02549 RNU6-980P-201ENST00000516925 103 ntBASIC-0.99□□□□□ -2.57
SPTA1P02549 RNU6-410P-201ENST00000517006 107 ntBASIC-0.99□□□□□ -2.57
SPTA1P02549 FRG2DP-202ENST00000566967 323 ntBASIC-0.99□□□□□ -2.57
SPTA1P02549 AL121655.1-201ENST00000605811 308 ntBASIC-0.99□□□□□ -2.57
SPTA1P02549 AC011603.4-201ENST00000611325 277 ntBASIC-0.99□□□□□ -2.57
SPTA1P02549 MIR6717-201ENST00000622747 73 ntBASIC-0.99□□□□□ -2.57
SPTA1P02549 RNY1P12-201ENST00000364251 105 ntBASIC-1□□□□□ -2.57
SPTA1P02549 Y_RNA.377-201ENST00000365644 108 ntBASIC-1□□□□□ -2.57
SPTA1P02549 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1□□□□□ -2.57
SPTA1P02549 AC098614.3-201ENST00000438957 440 ntBASIC-1□□□□□ -2.57
SPTA1P02549 AC091179.3-201ENST00000474761 144 ntBASIC-1□□□□□ -2.57
SPTA1P02549 AC091951.2-201ENST00000500762 203 ntBASIC-1□□□□□ -2.57
SPTA1P02549 RNU6-1220P-201ENST00000517126 108 ntBASIC-1□□□□□ -2.57
SPTA1P02549 AC022616.6-201ENST00000520479 119 ntBASIC-1□□□□□ -2.57
SPTA1P02549 AC092807.2-201ENST00000609367 243 ntBASIC-1□□□□□ -2.57
SPTA1P02549 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1□□□□□ -2.57
SPTA1P02549 AC023449.1-201ENST00000454464 154 ntBASIC-1□□□□□ -2.57
SPTA1P02549 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.01□□□□□ -2.57
SPTA1P02549 RNU4-80P-201ENST00000363200 141 ntBASIC-1.01□□□□□ -2.57
SPTA1P02549 SNORD115-35-201ENST00000365122 82 ntBASIC-1.01□□□□□ -2.57
SPTA1P02549 RNU6-601P-201ENST00000384540 107 ntBASIC-1.01□□□□□ -2.57
SPTA1P02549 U8.19-201ENST00000459095 133 ntBASIC-1.01□□□□□ -2.57
SPTA1P02549 U8.22-201ENST00000459141 133 ntBASIC-1.01□□□□□ -2.57
SPTA1P02549 SNORA25.13-201ENST00000516395 103 ntBASIC-1.01□□□□□ -2.57
SPTA1P02549 U4.1-201ENST00000620349 87 ntBASIC-1.01□□□□□ -2.57
SPTA1P02549 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.01□□□□□ -2.57
SPTA1P02549 RNU4-92P-201ENST00000363783 136 ntBASIC-1.01□□□□□ -2.57
SPTA1P02549 RNU6-268P-201ENST00000364174 107 ntBASIC-1.01□□□□□ -2.57
SPTA1P02549 RNU4-28P-201ENST00000364739 141 ntBASIC-1.01□□□□□ -2.57
SPTA1P02549 RNU6-1200P-201ENST00000384162 107 ntBASIC-1.01□□□□□ -2.57
SPTA1P02549 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.01□□□□□ -2.57
SPTA1P02549 RNU7-141P-201ENST00000459304 62 ntBASIC-1.01□□□□□ -2.57
SPTA1P02549 SNORA25.16-201ENST00000516741 121 ntBASIC-1.01□□□□□ -2.57
SPTA1P02549 AC245505.1-201ENST00000556398 224 ntBASIC-1.01□□□□□ -2.57
SPTA1P02549 CPDP1-201ENST00000579660 283 ntBASIC-1.01□□□□□ -2.57
SPTA1P02549 AC022140.2-201ENST00000623500 188 ntBASIC-1.01□□□□□ -2.57
SPTA1P02549 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.02□□□□□ -2.57
SPTA1P02549 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.02□□□□□ -2.57
SPTA1P02549 RNU2-14P-201ENST00000411053 191 ntBASIC-1.02□□□□□ -2.57
SPTA1P02549 AL354751.2-201ENST00000415471 210 ntBASIC-1.02□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms