Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RNU6-861P-201ENST00000516745 106 ntBASIC1.3□□□□□ -2.2
CLPTM1O96005 RNU6-922P-201ENST00000516753 99 ntBASIC1.3□□□□□ -2.2
CLPTM1O96005 AC004792.1-201ENST00000614523 137 ntBASIC1.3□□□□□ -2.2
CLPTM1O96005 AC015726.2-201ENST00000620112 122 ntBASIC1.3□□□□□ -2.2
CLPTM1O96005 Y_RNA.164-201ENST00000363709 102 ntBASIC1.29□□□□□ -2.2
CLPTM1O96005 RNU6-728P-201ENST00000365375 104 ntBASIC1.29□□□□□ -2.2
CLPTM1O96005 RNY3P5-201ENST00000384127 102 ntBASIC1.29□□□□□ -2.2
CLPTM1O96005 Y_RNA.785-201ENST00000384290 109 ntBASIC1.29□□□□□ -2.2
CLPTM1O96005 MIR452-201ENST00000385020 85 ntBASIC1.29□□□□□ -2.2
CLPTM1O96005 MIR517C-201ENST00000385103 95 ntBASIC1.29□□□□□ -2.2
CLPTM1O96005 RNU6-907P-201ENST00000390924 102 ntBASIC1.29□□□□□ -2.2
CLPTM1O96005 MIR548O-201ENST00000408583 114 ntBASIC1.29□□□□□ -2.2
CLPTM1O96005 RNU2-70P-201ENST00000410718 179 ntBASIC1.29□□□□□ -2.2
CLPTM1O96005 RNA5SP445-201ENST00000515889 115 ntBASIC1.29□□□□□ -2.2
CLPTM1O96005 RNU7-25P-201ENST00000516544 62 ntBASIC1.29□□□□□ -2.2
CLPTM1O96005 Y_RNA.700-201ENST00000516806 100 ntBASIC1.29□□□□□ -2.2
CLPTM1O96005 RNU6-1270P-201ENST00000517128 108 ntBASIC1.29□□□□□ -2.2
CLPTM1O96005 RNU6-902P-201ENST00000517212 91 ntBASIC1.29□□□□□ -2.2
CLPTM1O96005 MIR3668-201ENST00000582138 75 ntBASIC1.29□□□□□ -2.2
CLPTM1O96005 FAM106DP-201ENST00000586416 501 ntBASIC1.29□□□□□ -2.2
CLPTM1O96005 AP000942.3-201ENST00000603702 160 ntBASIC1.29□□□□□ -2.2
CLPTM1O96005 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CLPTM1O96005 RNU6-682P-201ENST00000363843 106 ntBASIC1.28□□□□□ -2.2
CLPTM1O96005 RNU6-275P-201ENST00000364910 107 ntBASIC1.28□□□□□ -2.2
CLPTM1O96005 SNORD1A-201ENST00000364968 72 ntBASIC1.28□□□□□ -2.2
CLPTM1O96005 SNORD38C-201ENST00000384381 69 ntBASIC1.28□□□□□ -2.2
CLPTM1O96005 RNA5SP247-201ENST00000411181 105 ntBASIC1.28□□□□□ -2.2
CLPTM1O96005 RNU7-120P-201ENST00000459334 63 ntBASIC1.28□□□□□ -2.2
CLPTM1O96005 RN7SKP179-201ENST00000516126 217 ntBASIC1.28□□□□□ -2.2
CLPTM1O96005 MIR4662B-201ENST00000579498 81 ntBASIC1.28□□□□□ -2.2
CLPTM1O96005 AC072026.1-201ENST00000605023 201 ntBASIC1.28□□□□□ -2.2
CLPTM1O96005 Y_RNA.75-201ENST00000362927 97 ntBASIC1.27□□□□□ -2.21
CLPTM1O96005 Y_RNA.634-201ENST00000364811 113 ntBASIC1.27□□□□□ -2.21
CLPTM1O96005 SNORD61-201ENST00000384252 73 ntBASIC1.27□□□□□ -2.21
CLPTM1O96005 AL354695.1-201ENST00000427935 228 ntBASIC1.27□□□□□ -2.21
CLPTM1O96005 SEPT7P4-201ENST00000437076 306 ntBASIC1.27□□□□□ -2.21
CLPTM1O96005 AC079140.2-201ENST00000506193 142 ntBASIC1.27□□□□□ -2.21
CLPTM1O96005 AC074198.2-201ENST00000508153 258 ntBASIC1.27□□□□□ -2.21
CLPTM1O96005 RNU6-197P-201ENST00000516680 100 ntBASIC1.27□□□□□ -2.21
CLPTM1O96005 DNAJC19P9-201ENST00000555084 351 ntBASIC1.27□□□□□ -2.21
CLPTM1O96005 AC068338.1-201ENST00000565567 176 ntBASIC1.27□□□□□ -2.21
CLPTM1O96005 MIR3937-201ENST00000580135 106 ntBASIC1.27□□□□□ -2.21
CLPTM1O96005 AC006441.5-201ENST00000612680 209 ntBASIC1.27□□□□□ -2.21
CLPTM1O96005 Y_RNA.23-201ENST00000362496 106 ntBASIC1.26□□□□□ -2.21
CLPTM1O96005 Y_RNA.66-201ENST00000362862 102 ntBASIC1.26□□□□□ -2.21
CLPTM1O96005 MIR136-201ENST00000385207 82 ntBASIC1.26□□□□□ -2.21
CLPTM1O96005 SNORD41-201ENST00000386967 70 ntBASIC1.26□□□□□ -2.21
CLPTM1O96005 RNU2-55P-201ENST00000411146 174 ntBASIC1.26□□□□□ -2.21
CLPTM1O96005 BTF3P4-201ENST00000418852 495 ntBASIC1.26□□□□□ -2.21
CLPTM1O96005 AL603825.1-201ENST00000438481 80 ntBASIC1.26□□□□□ -2.21
CLPTM1O96005 SNRPGP13-201ENST00000442212 177 ntBASIC1.26□□□□□ -2.21
CLPTM1O96005 RNU6-182P-201ENST00000516970 105 ntBASIC1.26□□□□□ -2.21
CLPTM1O96005 RNU6-365P-201ENST00000517113 106 ntBASIC1.26□□□□□ -2.21
CLPTM1O96005 SNORA31.24-201ENST00000517232 57 ntBASIC1.26□□□□□ -2.21
CLPTM1O96005 AC007751.1-201ENST00000529260 376 ntBASIC1.26□□□□□ -2.21
CLPTM1O96005 MRPS18CP4-201ENST00000535821 231 ntBASIC1.26□□□□□ -2.21
CLPTM1O96005 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.26□□□□□ -2.21
CLPTM1O96005 U8.1-201ENST00000362843 134 ntBASIC1.25□□□□□ -2.21
CLPTM1O96005 Y_RNA.150-201ENST00000363562 102 ntBASIC1.25□□□□□ -2.21
CLPTM1O96005 SNORA2.2-201ENST00000365473 135 ntBASIC1.25□□□□□ -2.21
CLPTM1O96005 RNU6-643P-201ENST00000384018 107 ntBASIC1.25□□□□□ -2.21
CLPTM1O96005 Y_RNA.547-201ENST00000384654 119 ntBASIC1.25□□□□□ -2.21
CLPTM1O96005 MIR548A2-201ENST00000384956 97 ntBASIC1.25□□□□□ -2.21
CLPTM1O96005 MIR653-201ENST00000385279 96 ntBASIC1.25□□□□□ -2.21
CLPTM1O96005 SNORA79-201ENST00000408376 140 ntBASIC1.25□□□□□ -2.21
CLPTM1O96005 RNU4-43P-201ENST00000410628 137 ntBASIC1.25□□□□□ -2.21
CLPTM1O96005 RNU5E-9P-201ENST00000411164 104 ntBASIC1.25□□□□□ -2.21
CLPTM1O96005 AC006461.1-201ENST00000412637 326 ntBASIC1.25□□□□□ -2.21
CLPTM1O96005 RPS27P16-201ENST00000425758 201 ntBASIC1.25□□□□□ -2.21
CLPTM1O96005 AC027119.1-201ENST00000440877 241 ntBASIC1.25□□□□□ -2.21
CLPTM1O96005 RNU6-693P-201ENST00000516134 107 ntBASIC1.25□□□□□ -2.21
CLPTM1O96005 RNA5SP153-201ENST00000516498 76 ntBASIC1.25□□□□□ -2.21
CLPTM1O96005 SNORA18.7-201ENST00000516910 131 ntBASIC1.25□□□□□ -2.21
CLPTM1O96005 AC090049.2-201ENST00000550377 109 ntBASIC1.25□□□□□ -2.21
CLPTM1O96005 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.25□□□□□ -2.21
CLPTM1O96005 AL442644.1-201ENST00000454390 3105 ntBASIC1.24□□□□□ -2.21
CLPTM1O96005 Y_RNA.242-201ENST00000364473 110 ntBASIC1.24□□□□□ -2.21
CLPTM1O96005 MIR518F-201ENST00000384973 87 ntBASIC1.24□□□□□ -2.21
CLPTM1O96005 AL451046.2-201ENST00000403074 277 ntBASIC1.24□□□□□ -2.21
CLPTM1O96005 RNU2-64P-201ENST00000411315 191 ntBASIC1.24□□□□□ -2.21
CLPTM1O96005 SNX2P2-201ENST00000424553 323 ntBASIC1.24□□□□□ -2.21
CLPTM1O96005 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.24□□□□□ -2.21
CLPTM1O96005 RNU7-181P-201ENST00000517234 74 ntBASIC1.24□□□□□ -2.21
CLPTM1O96005 AC097639.2-201ENST00000603159 172 ntBASIC1.24□□□□□ -2.21
CLPTM1O96005 AL121890.5-201ENST00000620848 304 ntBASIC1.24□□□□□ -2.21
CLPTM1O96005 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CLPTM1O96005 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.24□□□□□ -2.21
CLPTM1O96005 MIR378A-201ENST00000362177 66 ntBASIC1.23□□□□□ -2.21
CLPTM1O96005 MIR337-201ENST00000362281 93 ntBASIC1.23□□□□□ -2.21
CLPTM1O96005 Y_RNA.240-201ENST00000364469 95 ntBASIC1.23□□□□□ -2.21
CLPTM1O96005 SNORA25.8-201ENST00000364831 128 ntBASIC1.23□□□□□ -2.21
CLPTM1O96005 SNORA1-201ENST00000384107 130 ntBASIC1.23□□□□□ -2.21
CLPTM1O96005 MIR618-201ENST00000385287 98 ntBASIC1.23□□□□□ -2.21
CLPTM1O96005 SNORA26-201ENST00000391286 122 ntBASIC1.23□□□□□ -2.21
CLPTM1O96005 RNU7-95P-201ENST00000459222 64 ntBASIC1.23□□□□□ -2.21
CLPTM1O96005 SNORD123-201ENST00000459473 70 ntBASIC1.23□□□□□ -2.21
CLPTM1O96005 RNU6-1053P-201ENST00000515930 101 ntBASIC1.23□□□□□ -2.21
CLPTM1O96005 RNU4-57P-201ENST00000515980 135 ntBASIC1.23□□□□□ -2.21
CLPTM1O96005 RNU6-322P-201ENST00000516010 103 ntBASIC1.23□□□□□ -2.21
CLPTM1O96005 Y_RNA.662-201ENST00000516028 97 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms