Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 SNORD72-201ENST00000390994 80 ntBASIC1.27□□□□□ -2.21
CLDN1O95832 RNU6-1228P-201ENST00000391014 107 ntBASIC1.27□□□□□ -2.21
CLDN1O95832 RNU6-918P-201ENST00000391219 106 ntBASIC1.27□□□□□ -2.21
CLDN1O95832 RN7SKP51-201ENST00000410781 304 ntBASIC1.27□□□□□ -2.21
CLDN1O95832 snoU13.9-201ENST00000458927 103 ntBASIC1.27□□□□□ -2.21
CLDN1O95832 RNU6-138P-201ENST00000515952 107 ntBASIC1.27□□□□□ -2.21
CLDN1O95832 RNU7-12P-201ENST00000516030 62 ntBASIC1.27□□□□□ -2.21
CLDN1O95832 RNY3P16-201ENST00000516338 101 ntBASIC1.27□□□□□ -2.21
CLDN1O95832 RNU6-453P-201ENST00000516819 85 ntBASIC1.27□□□□□ -2.21
CLDN1O95832 AL160236.1-201ENST00000556317 195 ntBASIC1.27□□□□□ -2.21
CLDN1O95832 MIR4662B-201ENST00000579498 81 ntBASIC1.27□□□□□ -2.21
CLDN1O95832 MIR151B-201ENST00000584249 96 ntBASIC1.27□□□□□ -2.21
CLDN1O95832 AL049861.1-201ENST00000603130 150 ntBASIC1.27□□□□□ -2.21
CLDN1O95832 AC097639.2-201ENST00000603159 172 ntBASIC1.27□□□□□ -2.21
CLDN1O95832 AC006441.5-201ENST00000612680 209 ntBASIC1.27□□□□□ -2.21
CLDN1O95832 MIR6788-201ENST00000618842 66 ntBASIC1.27□□□□□ -2.21
CLDN1O95832 ICE2P2-201ENST00000483823 2787 ntBASIC1.27□□□□□ -2.21
CLDN1O95832 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CLDN1O95832 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CLDN1O95832 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.27□□□□□ -2.21
CLDN1O95832 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CLDN1O95832 Y_RNA.7-201ENST00000362352 102 ntBASIC1.26□□□□□ -2.21
CLDN1O95832 RNU6-199P-201ENST00000362954 107 ntBASIC1.26□□□□□ -2.21
CLDN1O95832 Y_RNA.785-201ENST00000384290 109 ntBASIC1.26□□□□□ -2.21
CLDN1O95832 RNU6-163P-201ENST00000384396 106 ntBASIC1.26□□□□□ -2.21
CLDN1O95832 MIR526A1-201ENST00000384897 85 ntBASIC1.26□□□□□ -2.21
CLDN1O95832 MIR452-201ENST00000385020 85 ntBASIC1.26□□□□□ -2.21
CLDN1O95832 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.26□□□□□ -2.21
CLDN1O95832 RNU6-493P-201ENST00000391321 108 ntBASIC1.26□□□□□ -2.21
CLDN1O95832 MIR1304-201ENST00000408243 91 ntBASIC1.26□□□□□ -2.21
CLDN1O95832 MIR548J-201ENST00000408833 112 ntBASIC1.26□□□□□ -2.21
CLDN1O95832 RNU4-43P-201ENST00000410628 137 ntBASIC1.26□□□□□ -2.21
CLDN1O95832 MLLT10P1-201ENST00000418346 262 ntBASIC1.26□□□□□ -2.21
CLDN1O95832 PIGPP3-201ENST00000425307 415 ntBASIC1.26□□□□□ -2.21
CLDN1O95832 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.26□□□□□ -2.21
CLDN1O95832 RNU6-126P-201ENST00000516685 103 ntBASIC1.26□□□□□ -2.21
CLDN1O95832 RNU7-149P-201ENST00000516739 59 ntBASIC1.26□□□□□ -2.21
CLDN1O95832 MIR4778-201ENST00000577635 80 ntBASIC1.26□□□□□ -2.21
CLDN1O95832 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.26□□□□□ -2.21
CLDN1O95832 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CLDN1O95832 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CLDN1O95832 SNORD14E-201ENST00000364009 85 ntBASIC1.25□□□□□ -2.21
CLDN1O95832 Y_RNA.297-201ENST00000364950 91 ntBASIC1.25□□□□□ -2.21
CLDN1O95832 RNU6-442P-201ENST00000383968 104 ntBASIC1.25□□□□□ -2.21
CLDN1O95832 Y_RNA.571-201ENST00000384753 98 ntBASIC1.25□□□□□ -2.21
CLDN1O95832 MIR320A-201ENST00000385302 82 ntBASIC1.25□□□□□ -2.21
CLDN1O95832 MT-TT-201ENST00000387460 66 ntBASIC1.25□□□□□ -2.21
CLDN1O95832 AL606845.1-201ENST00000404881 255 ntBASIC1.25□□□□□ -2.21
CLDN1O95832 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.25□□□□□ -2.21
CLDN1O95832 AC027119.1-201ENST00000440877 241 ntBASIC1.25□□□□□ -2.21
CLDN1O95832 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.25□□□□□ -2.21
CLDN1O95832 AC023449.1-201ENST00000454464 154 ntBASIC1.25□□□□□ -2.21
CLDN1O95832 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.25□□□□□ -2.21
CLDN1O95832 RNU6-917P-201ENST00000516294 104 ntBASIC1.25□□□□□ -2.21
CLDN1O95832 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.24□□□□□ -2.21
CLDN1O95832 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CLDN1O95832 RNU6-1084P-201ENST00000362498 107 ntBASIC1.24□□□□□ -2.21
CLDN1O95832 SNORD33-201ENST00000362761 85 ntBASIC1.24□□□□□ -2.21
CLDN1O95832 RNU6-268P-201ENST00000364174 107 ntBASIC1.24□□□□□ -2.21
CLDN1O95832 RNU6-923P-201ENST00000364753 107 ntBASIC1.24□□□□□ -2.21
CLDN1O95832 SNORD1A-201ENST00000364968 72 ntBASIC1.24□□□□□ -2.21
CLDN1O95832 RNU6-1318P-201ENST00000365389 103 ntBASIC1.24□□□□□ -2.21
CLDN1O95832 SNORA2.2-201ENST00000365473 135 ntBASIC1.24□□□□□ -2.21
CLDN1O95832 RNU6-47P-201ENST00000383866 107 ntBASIC1.24□□□□□ -2.21
CLDN1O95832 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.24□□□□□ -2.21
CLDN1O95832 AC093850.1-201ENST00000454121 251 ntBASIC1.24□□□□□ -2.21
CLDN1O95832 Y_RNA.644-201ENST00000459006 113 ntBASIC1.24□□□□□ -2.21
CLDN1O95832 RNA5SP436-201ENST00000516020 115 ntBASIC1.24□□□□□ -2.21
CLDN1O95832 RNU6-830P-201ENST00000516353 107 ntBASIC1.24□□□□□ -2.21
CLDN1O95832 Y_RNA.674-201ENST00000516362 113 ntBASIC1.24□□□□□ -2.21
CLDN1O95832 AC090142.3-201ENST00000519012 385 ntBASIC1.24□□□□□ -2.21
CLDN1O95832 SUMO2P16-201ENST00000519475 264 ntBASIC1.24□□□□□ -2.21
CLDN1O95832 AC090049.2-201ENST00000550377 109 ntBASIC1.24□□□□□ -2.21
CLDN1O95832 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.24□□□□□ -2.21
CLDN1O95832 MIR4744-201ENST00000581563 82 ntBASIC1.24□□□□□ -2.21
CLDN1O95832 MIR4422-201ENST00000581938 83 ntBASIC1.24□□□□□ -2.21
CLDN1O95832 AP001485.1-201ENST00000604799 199 ntBASIC1.24□□□□□ -2.21
CLDN1O95832 AC108706.1-201ENST00000611053 297 ntBASIC1.24□□□□□ -2.21
CLDN1O95832 Y_RNA.75-201ENST00000362927 97 ntBASIC1.23□□□□□ -2.21
CLDN1O95832 RNU6-1020P-201ENST00000363684 107 ntBASIC1.23□□□□□ -2.21
CLDN1O95832 SNORD45.3-201ENST00000363836 72 ntBASIC1.23□□□□□ -2.21
CLDN1O95832 RNA5SP259-201ENST00000365541 109 ntBASIC1.23□□□□□ -2.21
CLDN1O95832 RNU6-578P-201ENST00000390980 103 ntBASIC1.23□□□□□ -2.21
CLDN1O95832 Y_RNA.587-201ENST00000391210 103 ntBASIC1.23□□□□□ -2.21
CLDN1O95832 RNU1-78P-201ENST00000391248 165 ntBASIC1.23□□□□□ -2.21
CLDN1O95832 HSPE1P24-201ENST00000450782 238 ntBASIC1.23□□□□□ -2.21
CLDN1O95832 RNA5SP153-201ENST00000516498 76 ntBASIC1.23□□□□□ -2.21
CLDN1O95832 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
CLDN1O95832 Y_RNA.66-201ENST00000362862 102 ntBASIC1.22□□□□□ -2.21
CLDN1O95832 RNU6-275P-201ENST00000364910 107 ntBASIC1.22□□□□□ -2.21
CLDN1O95832 SNORD24-201ENST00000383884 75 ntBASIC1.22□□□□□ -2.21
CLDN1O95832 Y_RNA.393-201ENST00000383936 102 ntBASIC1.22□□□□□ -2.21
CLDN1O95832 Y_RNA.486-201ENST00000384398 107 ntBASIC1.22□□□□□ -2.21
CLDN1O95832 MIR15B-201ENST00000385045 98 ntBASIC1.22□□□□□ -2.21
CLDN1O95832 SNORD41-201ENST00000386967 70 ntBASIC1.22□□□□□ -2.21
CLDN1O95832 AC108059.2-201ENST00000434626 151 ntBASIC1.22□□□□□ -2.21
CLDN1O95832 AC015922.2-201ENST00000435593 184 ntBASIC1.22□□□□□ -2.21
CLDN1O95832 AL138752.1-201ENST00000452964 351 ntBASIC1.22□□□□□ -2.21
CLDN1O95832 RNU7-120P-201ENST00000459334 63 ntBASIC1.22□□□□□ -2.21
CLDN1O95832 AC109810.1-201ENST00000534066 224 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 261 ms