Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 SNRPGP8-201ENST00000454064 226 ntBASIC1.4□□□□□ -2.19
PRKNO60260 RNU6-1299P-201ENST00000516316 100 ntBASIC1.4□□□□□ -2.19
PRKNO60260 SNORA77B-201ENST00000578179 125 ntBASIC1.4□□□□□ -2.19
PRKNO60260 MIR4285-201ENST00000581001 85 ntBASIC1.4□□□□□ -2.19
PRKNO60260 AC104465.1-201ENST00000611365 139 ntBASIC1.4□□□□□ -2.19
PRKNO60260 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.4□□□□□ -2.19
PRKNO60260 MIR8063-201ENST00000621930 81 ntBASIC1.4□□□□□ -2.19
PRKNO60260 AC021753.1-201ENST00000635724 168 ntBASIC1.4□□□□□ -2.19
PRKNO60260 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
PRKNO60260 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
PRKNO60260 Y_RNA.170-201ENST00000363746 110 ntBASIC1.39□□□□□ -2.19
PRKNO60260 RNU4-84P-201ENST00000364200 139 ntBASIC1.39□□□□□ -2.19
PRKNO60260 Y_RNA.272-201ENST00000364696 102 ntBASIC1.39□□□□□ -2.19
PRKNO60260 Y_RNA.336-201ENST00000365307 109 ntBASIC1.39□□□□□ -2.19
PRKNO60260 RNU6-484P-201ENST00000384016 107 ntBASIC1.39□□□□□ -2.19
PRKNO60260 Y_RNA.432-201ENST00000384087 111 ntBASIC1.39□□□□□ -2.19
PRKNO60260 Y_RNA.486-201ENST00000384398 107 ntBASIC1.39□□□□□ -2.19
PRKNO60260 SNORA67.6-201ENST00000391093 99 ntBASIC1.39□□□□□ -2.19
PRKNO60260 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.39□□□□□ -2.19
PRKNO60260 HMGN2P32-201ENST00000444648 269 ntBASIC1.39□□□□□ -2.19
PRKNO60260 AC023790.1-201ENST00000482174 347 ntBASIC1.39□□□□□ -2.19
PRKNO60260 AC005840.1-201ENST00000498412 377 ntBASIC1.39□□□□□ -2.19
PRKNO60260 MIR3144-201ENST00000579460 79 ntBASIC1.39□□□□□ -2.19
PRKNO60260 MIR4431-201ENST00000579990 94 ntBASIC1.39□□□□□ -2.19
PRKNO60260 Y_RNA.91-201ENST00000363042 107 ntBASIC1.38□□□□□ -2.19
PRKNO60260 MIR517C-201ENST00000385103 95 ntBASIC1.38□□□□□ -2.19
PRKNO60260 MIR516B2-201ENST00000385190 85 ntBASIC1.38□□□□□ -2.19
PRKNO60260 MIR1287-201ENST00000408492 90 ntBASIC1.38□□□□□ -2.19
PRKNO60260 RNU2-70P-201ENST00000410718 179 ntBASIC1.38□□□□□ -2.19
PRKNO60260 RNU2-55P-201ENST00000411146 174 ntBASIC1.38□□□□□ -2.19
PRKNO60260 MTND5P41-201ENST00000517498 206 ntBASIC1.38□□□□□ -2.19
PRKNO60260 MIR4662B-201ENST00000579498 81 ntBASIC1.38□□□□□ -2.19
PRKNO60260 MIR337-201ENST00000362281 93 ntBASIC1.37□□□□□ -2.19
PRKNO60260 Y_RNA.8-201ENST00000362353 102 ntBASIC1.37□□□□□ -2.19
PRKNO60260 RNU6-199P-201ENST00000362954 107 ntBASIC1.37□□□□□ -2.19
PRKNO60260 RNU6-774P-201ENST00000363238 107 ntBASIC1.37□□□□□ -2.19
PRKNO60260 RNU6-268P-201ENST00000364174 107 ntBASIC1.37□□□□□ -2.19
PRKNO60260 Y_RNA.242-201ENST00000364473 110 ntBASIC1.37□□□□□ -2.19
PRKNO60260 RNU6-1130P-201ENST00000365434 107 ntBASIC1.37□□□□□ -2.19
PRKNO60260 Y_RNA.398-201ENST00000383952 99 ntBASIC1.37□□□□□ -2.19
PRKNO60260 RNU6-643P-201ENST00000384018 107 ntBASIC1.37□□□□□ -2.19
PRKNO60260 MIR548M-201ENST00000408260 86 ntBASIC1.37□□□□□ -2.19
PRKNO60260 SNORA79-201ENST00000408376 140 ntBASIC1.37□□□□□ -2.19
PRKNO60260 RNU4-43P-201ENST00000410628 137 ntBASIC1.37□□□□□ -2.19
PRKNO60260 AP1B1P2-201ENST00000416196 106 ntBASIC1.37□□□□□ -2.19
PRKNO60260 SNRPGP14-201ENST00000435400 219 ntBASIC1.37□□□□□ -2.19
PRKNO60260 HSPE1P24-201ENST00000450782 238 ntBASIC1.37□□□□□ -2.19
PRKNO60260 snoU13.9-201ENST00000458927 103 ntBASIC1.37□□□□□ -2.19
PRKNO60260 RNU1-98P-201ENST00000458992 160 ntBASIC1.37□□□□□ -2.19
PRKNO60260 RNU7-95P-201ENST00000459222 64 ntBASIC1.37□□□□□ -2.19
PRKNO60260 Y_RNA.666-201ENST00000516187 112 ntBASIC1.37□□□□□ -2.19
PRKNO60260 RNU6-970P-201ENST00000516312 107 ntBASIC1.37□□□□□ -2.19
PRKNO60260 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.37□□□□□ -2.19
PRKNO60260 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
PRKNO60260 Y_RNA.634-201ENST00000364811 113 ntBASIC1.36□□□□□ -2.19
PRKNO60260 Y_RNA.357-201ENST00000365487 109 ntBASIC1.36□□□□□ -2.19
PRKNO60260 SNORD116-18-201ENST00000383961 92 ntBASIC1.36□□□□□ -2.19
PRKNO60260 RNU6-746P-201ENST00000384112 109 ntBASIC1.36□□□□□ -2.19
PRKNO60260 Y_RNA.506-201ENST00000384494 102 ntBASIC1.36□□□□□ -2.19
PRKNO60260 RNU6-125P-201ENST00000384505 107 ntBASIC1.36□□□□□ -2.19
PRKNO60260 MIR526A1-201ENST00000384897 85 ntBASIC1.36□□□□□ -2.19
PRKNO60260 MIR452-201ENST00000385020 85 ntBASIC1.36□□□□□ -2.19
PRKNO60260 Y_RNA.580-201ENST00000391004 95 ntBASIC1.36□□□□□ -2.19
PRKNO60260 AC015922.2-201ENST00000435593 184 ntBASIC1.36□□□□□ -2.19
PRKNO60260 AC107027.2-201ENST00000512197 115 ntBASIC1.36□□□□□ -2.19
PRKNO60260 RNU6-197P-201ENST00000516680 100 ntBASIC1.36□□□□□ -2.19
PRKNO60260 RNU6-365P-201ENST00000517113 106 ntBASIC1.36□□□□□ -2.19
PRKNO60260 SNORA31.24-201ENST00000517232 57 ntBASIC1.36□□□□□ -2.19
PRKNO60260 AC090142.3-201ENST00000519012 385 ntBASIC1.36□□□□□ -2.19
PRKNO60260 AC015688.6-201ENST00000577737 104 ntBASIC1.36□□□□□ -2.19
PRKNO60260 AC015726.2-201ENST00000620112 122 ntBASIC1.36□□□□□ -2.19
PRKNO60260 RNY1P5-201ENST00000383890 115 ntBASIC1.35□□□□□ -2.19
PRKNO60260 SNORD38C-201ENST00000384381 69 ntBASIC1.35□□□□□ -2.19
PRKNO60260 RNU6-997P-201ENST00000384725 107 ntBASIC1.35□□□□□ -2.19
PRKNO60260 MIR320A-201ENST00000385302 82 ntBASIC1.35□□□□□ -2.19
PRKNO60260 RNU6-239P-201ENST00000390990 99 ntBASIC1.35□□□□□ -2.19
PRKNO60260 RNU6-321P-201ENST00000410912 106 ntBASIC1.35□□□□□ -2.19
PRKNO60260 AC006461.1-201ENST00000412637 326 ntBASIC1.35□□□□□ -2.19
PRKNO60260 AC092991.1-201ENST00000477176 376 ntBASIC1.35□□□□□ -2.19
PRKNO60260 RNU7-200P-201ENST00000516105 62 ntBASIC1.35□□□□□ -2.19
PRKNO60260 RNU6-917P-201ENST00000516294 104 ntBASIC1.35□□□□□ -2.19
PRKNO60260 RNU7-121P-201ENST00000516604 62 ntBASIC1.35□□□□□ -2.19
PRKNO60260 Y_RNA.703-201ENST00000516846 111 ntBASIC1.35□□□□□ -2.19
PRKNO60260 MIR3133-201ENST00000583157 78 ntBASIC1.35□□□□□ -2.19
PRKNO60260 FAM106DP-201ENST00000586416 501 ntBASIC1.35□□□□□ -2.19
PRKNO60260 AC006441.5-201ENST00000612680 209 ntBASIC1.35□□□□□ -2.19
PRKNO60260 RNU6-449P-201ENST00000383914 107 ntBASIC1.34□□□□□ -2.19
PRKNO60260 SNORA26-201ENST00000391286 122 ntBASIC1.34□□□□□ -2.19
PRKNO60260 MIR548O-201ENST00000408583 114 ntBASIC1.34□□□□□ -2.19
PRKNO60260 SNRPGP13-201ENST00000442212 177 ntBASIC1.34□□□□□ -2.19
PRKNO60260 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.34□□□□□ -2.19
PRKNO60260 RNA5SP153-201ENST00000516498 76 ntBASIC1.34□□□□□ -2.19
PRKNO60260 RNU7-25P-201ENST00000516544 62 ntBASIC1.34□□□□□ -2.19
PRKNO60260 RNU6-126P-201ENST00000516685 103 ntBASIC1.34□□□□□ -2.19
PRKNO60260 RNU6-1270P-201ENST00000517128 108 ntBASIC1.34□□□□□ -2.19
PRKNO60260 AC019176.1-201ENST00000518519 225 ntBASIC1.34□□□□□ -2.19
PRKNO60260 AL160236.1-201ENST00000556317 195 ntBASIC1.34□□□□□ -2.19
PRKNO60260 AC097639.2-201ENST00000603159 172 ntBASIC1.34□□□□□ -2.19
PRKNO60260 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.34□□□□□ -2.19
PRKNO60260 MIR7111-201ENST00000619751 72 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms