Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
LDB2O43679 Y_RNA.580-201ENST00000391004 95 ntBASIC1.56□□□□□ -2.16
LDB2O43679 RNU4-62P-201ENST00000410125 130 ntBASIC1.56□□□□□ -2.16
LDB2O43679 BTF3P4-201ENST00000418852 495 ntBASIC1.56□□□□□ -2.16
LDB2O43679 SNRPGP13-201ENST00000442212 177 ntBASIC1.56□□□□□ -2.16
LDB2O43679 AC008834.1-201ENST00000511612 175 ntBASIC1.56□□□□□ -2.16
LDB2O43679 Y_RNA.666-201ENST00000516187 112 ntBASIC1.56□□□□□ -2.16
LDB2O43679 SNORA44.1-201ENST00000517031 108 ntBASIC1.56□□□□□ -2.16
LDB2O43679 MIR4778-201ENST00000577635 80 ntBASIC1.56□□□□□ -2.16
LDB2O43679 AC095038.3-201ENST00000634439 195 ntBASIC1.56□□□□□ -2.16
LDB2O43679 RNU6-888P-201ENST00000363010 101 ntBASIC1.55□□□□□ -2.16
LDB2O43679 Y_RNA.164-201ENST00000363709 102 ntBASIC1.55□□□□□ -2.16
LDB2O43679 RNU6-449P-201ENST00000383914 107 ntBASIC1.55□□□□□ -2.16
LDB2O43679 Y_RNA.393-201ENST00000383936 102 ntBASIC1.55□□□□□ -2.16
LDB2O43679 SNORD38C-201ENST00000384381 69 ntBASIC1.55□□□□□ -2.16
LDB2O43679 Y_RNA.521-201ENST00000384560 114 ntBASIC1.55□□□□□ -2.16
LDB2O43679 SNORA67.5-201ENST00000391036 107 ntBASIC1.55□□□□□ -2.16
LDB2O43679 AC093850.1-201ENST00000454121 251 ntBASIC1.55□□□□□ -2.16
LDB2O43679 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.55□□□□□ -2.16
LDB2O43679 SNORD53B-201ENST00000577887 78 ntBASIC1.55□□□□□ -2.16
LDB2O43679 MTND1P7-201ENST00000632801 297 ntBASIC1.55□□□□□ -2.16
LDB2O43679 AC021753.1-201ENST00000635724 168 ntBASIC1.55□□□□□ -2.16
LDB2O43679 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.55□□□□□ -2.16
LDB2O43679 RNU6-199P-201ENST00000362954 107 ntBASIC1.54□□□□□ -2.16
LDB2O43679 RNU6-597P-201ENST00000365620 102 ntBASIC1.54□□□□□ -2.16
LDB2O43679 SNORD116-18-201ENST00000383961 92 ntBASIC1.54□□□□□ -2.16
LDB2O43679 SNORD61-201ENST00000384252 73 ntBASIC1.54□□□□□ -2.16
LDB2O43679 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
LDB2O43679 MIR548O-201ENST00000408583 114 ntBASIC1.54□□□□□ -2.16
LDB2O43679 AC015922.2-201ENST00000435593 184 ntBASIC1.54□□□□□ -2.16
LDB2O43679 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.54□□□□□ -2.16
LDB2O43679 AC007751.1-201ENST00000529260 376 ntBASIC1.54□□□□□ -2.16
LDB2O43679 MIR4498-201ENST00000577599 66 ntBASIC1.54□□□□□ -2.16
LDB2O43679 MIR3198-2-201ENST00000577868 80 ntBASIC1.54□□□□□ -2.16
LDB2O43679 SNORA77B-201ENST00000578179 125 ntBASIC1.54□□□□□ -2.16
LDB2O43679 DNAJC19P2-201ENST00000593340 302 ntBASIC1.54□□□□□ -2.16
LDB2O43679 BX248123.2-201ENST00000606318 124 ntBASIC1.54□□□□□ -2.16
LDB2O43679 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
LDB2O43679 Y_RNA.8-201ENST00000362353 102 ntBASIC1.53□□□□□ -2.16
LDB2O43679 RNU6-1130P-201ENST00000365434 107 ntBASIC1.53□□□□□ -2.16
LDB2O43679 Y_RNA.398-201ENST00000383952 99 ntBASIC1.53□□□□□ -2.16
LDB2O43679 MIR548A2-201ENST00000384956 97 ntBASIC1.53□□□□□ -2.16
LDB2O43679 MIR934-201ENST00000401241 83 ntBASIC1.53□□□□□ -2.16
LDB2O43679 MIR1323-201ENST00000408090 73 ntBASIC1.53□□□□□ -2.16
LDB2O43679 RNU6-1053P-201ENST00000515930 101 ntBASIC1.53□□□□□ -2.16
LDB2O43679 RNU6-693P-201ENST00000516134 107 ntBASIC1.53□□□□□ -2.16
LDB2O43679 Y_RNA.676-201ENST00000516393 96 ntBASIC1.53□□□□□ -2.16
LDB2O43679 RNU7-25P-201ENST00000516544 62 ntBASIC1.53□□□□□ -2.16
LDB2O43679 RNU6-255P-201ENST00000516957 105 ntBASIC1.53□□□□□ -2.16
LDB2O43679 RNU6-1270P-201ENST00000517128 108 ntBASIC1.53□□□□□ -2.16
LDB2O43679 AC090142.3-201ENST00000519012 385 ntBASIC1.53□□□□□ -2.16
LDB2O43679 SUMO2P16-201ENST00000519475 264 ntBASIC1.53□□□□□ -2.16
LDB2O43679 MIR3646-201ENST00000578301 84 ntBASIC1.53□□□□□ -2.16
LDB2O43679 Y_RNA.170-201ENST00000363746 110 ntBASIC1.52□□□□□ -2.17
LDB2O43679 SNORA25.7-201ENST00000364375 127 ntBASIC1.52□□□□□ -2.17
LDB2O43679 Y_RNA.542-201ENST00000384641 111 ntBASIC1.52□□□□□ -2.17
LDB2O43679 RNU6-768P-201ENST00000384683 107 ntBASIC1.52□□□□□ -2.17
LDB2O43679 MIR518F-201ENST00000384973 87 ntBASIC1.52□□□□□ -2.17
LDB2O43679 MIR30A-201ENST00000385092 71 ntBASIC1.52□□□□□ -2.17
LDB2O43679 MIR513A1-201ENST00000385138 129 ntBASIC1.52□□□□□ -2.17
LDB2O43679 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.52□□□□□ -2.17
LDB2O43679 RNU6-830P-201ENST00000516353 107 ntBASIC1.52□□□□□ -2.17
LDB2O43679 AL365205.2-201ENST00000594586 68 ntBASIC1.52□□□□□ -2.17
LDB2O43679 snoU13.31-201ENST00000607291 104 ntBASIC1.52□□□□□ -2.17
LDB2O43679 AC015726.2-201ENST00000620112 122 ntBASIC1.52□□□□□ -2.17
LDB2O43679 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
LDB2O43679 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.52□□□□□ -2.17
LDB2O43679 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LDB2O43679 RNU1-42P-201ENST00000364033 160 ntBASIC1.51□□□□□ -2.17
LDB2O43679 RNA5SP259-201ENST00000365541 109 ntBASIC1.51□□□□□ -2.17
LDB2O43679 Y_RNA.547-201ENST00000384654 119 ntBASIC1.51□□□□□ -2.17
LDB2O43679 MIR526A1-201ENST00000384897 85 ntBASIC1.51□□□□□ -2.17
LDB2O43679 MIR516B2-201ENST00000385190 85 ntBASIC1.51□□□□□ -2.17
LDB2O43679 MIR136-201ENST00000385207 82 ntBASIC1.51□□□□□ -2.17
LDB2O43679 MIR320A-201ENST00000385302 82 ntBASIC1.51□□□□□ -2.17
LDB2O43679 MTND5P41-201ENST00000517498 206 ntBASIC1.51□□□□□ -2.17
LDB2O43679 AC015688.6-201ENST00000577737 104 ntBASIC1.51□□□□□ -2.17
LDB2O43679 MIR4285-201ENST00000581001 85 ntBASIC1.51□□□□□ -2.17
LDB2O43679 Y_RNA.778-201ENST00000620203 90 ntBASIC1.51□□□□□ -2.17
LDB2O43679 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LDB2O43679 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
LDB2O43679 SNORD115-28-201ENST00000363931 81 ntBASIC1.5□□□□□ -2.17
LDB2O43679 RNY1P5-201ENST00000383890 115 ntBASIC1.5□□□□□ -2.17
LDB2O43679 MIR517C-201ENST00000385103 95 ntBASIC1.5□□□□□ -2.17
LDB2O43679 SNORA75.5-201ENST00000391291 81 ntBASIC1.5□□□□□ -2.17
LDB2O43679 MIR1304-201ENST00000408243 91 ntBASIC1.5□□□□□ -2.17
LDB2O43679 AP1B1P2-201ENST00000416196 106 ntBASIC1.5□□□□□ -2.17
LDB2O43679 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.5□□□□□ -2.17
LDB2O43679 RNU7-200P-201ENST00000516105 62 ntBASIC1.5□□□□□ -2.17
LDB2O43679 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.5□□□□□ -2.17
LDB2O43679 AL512598.1-201ENST00000610158 273 ntBASIC1.5□□□□□ -2.17
LDB2O43679 MIR3658-201ENST00000636291 56 ntBASIC1.5□□□□□ -2.17
LDB2O43679 MIR6844-201ENST00000637122 62 ntBASIC1.5□□□□□ -2.17
LDB2O43679 ICE2P2-201ENST00000483823 2787 ntBASIC1.49□□□□□ -2.17
LDB2O43679 Y_RNA.4-201ENST00000362333 112 ntBASIC1.49□□□□□ -2.17
LDB2O43679 RNU6-151P-201ENST00000364158 107 ntBASIC1.49□□□□□ -2.17
LDB2O43679 RNU6-60P-201ENST00000364792 103 ntBASIC1.49□□□□□ -2.17
LDB2O43679 SNORA2.2-201ENST00000365473 135 ntBASIC1.49□□□□□ -2.17
LDB2O43679 SNORD37.2-201ENST00000391075 66 ntBASIC1.49□□□□□ -2.17
LDB2O43679 SNORA67.6-201ENST00000391093 99 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms