Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RNU6-1116P-201ENST00000517269 99 ntBASIC1.98□□□□□ -2.09
PROM1O43490 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.98□□□□□ -2.09
PROM1O43490 Y_RNA.52-201ENST00000362760 96 ntBASIC1.97□□□□□ -2.09
PROM1O43490 Y_RNA.120-201ENST00000363304 110 ntBASIC1.97□□□□□ -2.09
PROM1O43490 HMGN2P19-201ENST00000425149 265 ntBASIC1.97□□□□□ -2.09
PROM1O43490 HMGN2P32-201ENST00000444648 269 ntBASIC1.97□□□□□ -2.09
PROM1O43490 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.97□□□□□ -2.09
PROM1O43490 RPL23AP63-201ENST00000498752 471 ntBASIC1.97□□□□□ -2.09
PROM1O43490 AC114811.1-201ENST00000507207 168 ntBASIC1.97□□□□□ -2.09
PROM1O43490 Y_RNA.690-201ENST00000516603 95 ntBASIC1.97□□□□□ -2.09
PROM1O43490 Y_RNA.692-201ENST00000516627 105 ntBASIC1.97□□□□□ -2.09
PROM1O43490 MIR4448-201ENST00000584360 86 ntBASIC1.97□□□□□ -2.09
PROM1O43490 MIR219B-201ENST00000637023 88 ntBASIC1.97□□□□□ -2.09
PROM1O43490 ZNF355P-201ENST00000427301 3216 ntBASIC1.97□□□□□ -2.09
PROM1O43490 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.96□□□□□ -2.1
PROM1O43490 Y_RNA.4-201ENST00000362333 112 ntBASIC1.96□□□□□ -2.1
PROM1O43490 Y_RNA.127-201ENST00000363386 109 ntBASIC1.96□□□□□ -2.1
PROM1O43490 RNU6-268P-201ENST00000364174 107 ntBASIC1.96□□□□□ -2.1
PROM1O43490 SNORA63D-201ENST00000364359 132 ntBASIC1.96□□□□□ -2.1
PROM1O43490 SNORD116-14-201ENST00000383894 92 ntBASIC1.96□□□□□ -2.1
PROM1O43490 SNORD116-17-201ENST00000383929 92 ntBASIC1.96□□□□□ -2.1
PROM1O43490 RNU6-80P-201ENST00000384195 107 ntBASIC1.96□□□□□ -2.1
PROM1O43490 SNORD116-15-201ENST00000384445 92 ntBASIC1.96□□□□□ -2.1
PROM1O43490 SNORD116-19-201ENST00000384729 92 ntBASIC1.96□□□□□ -2.1
PROM1O43490 MIR548A2-201ENST00000384956 97 ntBASIC1.96□□□□□ -2.1
PROM1O43490 MIR518F-201ENST00000384973 87 ntBASIC1.96□□□□□ -2.1
PROM1O43490 CYCTP-201ENST00000504253 315 ntBASIC1.96□□□□□ -2.1
PROM1O43490 RNU4-57P-201ENST00000515980 135 ntBASIC1.96□□□□□ -2.1
PROM1O43490 RNU7-25P-201ENST00000516544 62 ntBASIC1.96□□□□□ -2.1
PROM1O43490 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.96□□□□□ -2.1
PROM1O43490 AC022254.1-201ENST00000567857 235 ntBASIC1.96□□□□□ -2.1
PROM1O43490 MIR4713-201ENST00000582691 75 ntBASIC1.96□□□□□ -2.1
PROM1O43490 AC015726.2-201ENST00000620112 122 ntBASIC1.96□□□□□ -2.1
PROM1O43490 uc_338.20-201ENST00000621563 178 ntBASIC1.96□□□□□ -2.1
PROM1O43490 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.96□□□□□ -2.1
PROM1O43490 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PROM1O43490 RNU6-235P-201ENST00000362644 107 ntBASIC1.95□□□□□ -2.1
PROM1O43490 Y_RNA.140-201ENST00000363474 103 ntBASIC1.95□□□□□ -2.1
PROM1O43490 Y_RNA.336-201ENST00000365307 109 ntBASIC1.95□□□□□ -2.1
PROM1O43490 CALM2P4-201ENST00000430810 426 ntBASIC1.95□□□□□ -2.1
PROM1O43490 AL021397.1-201ENST00000451806 248 ntBASIC1.95□□□□□ -2.1
PROM1O43490 RNA5SP364-201ENST00000516938 78 ntBASIC1.95□□□□□ -2.1
PROM1O43490 RNA5SP437-201ENST00000517249 129 ntBASIC1.95□□□□□ -2.1
PROM1O43490 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.95□□□□□ -2.1
PROM1O43490 MIR3935-201ENST00000583472 104 ntBASIC1.95□□□□□ -2.1
PROM1O43490 AL359881.1-201ENST00000602916 267 ntBASIC1.95□□□□□ -2.1
PROM1O43490 AC006441.5-201ENST00000612680 209 ntBASIC1.95□□□□□ -2.1
PROM1O43490 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.94□□□□□ -2.1
PROM1O43490 RNU6-1290P-201ENST00000362957 109 ntBASIC1.94□□□□□ -2.1
PROM1O43490 RNU6-112P-201ENST00000363599 104 ntBASIC1.94□□□□□ -2.1
PROM1O43490 U8.16-201ENST00000391279 133 ntBASIC1.94□□□□□ -2.1
PROM1O43490 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.94□□□□□ -2.1
PROM1O43490 AF228730.3-201ENST00000436691 102 ntBASIC1.94□□□□□ -2.1
PROM1O43490 RNU7-12P-201ENST00000516030 62 ntBASIC1.94□□□□□ -2.1
PROM1O43490 SUB1P4-201ENST00000566062 339 ntBASIC1.94□□□□□ -2.1
PROM1O43490 MTND5P32-201ENST00000560711 1802 ntBASIC1.94□□□□□ -2.1
PROM1O43490 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
PROM1O43490 RNU6-508P-201ENST00000363231 103 ntBASIC1.93□□□□□ -2.1
PROM1O43490 RNU6-1292P-201ENST00000383856 107 ntBASIC1.93□□□□□ -2.1
PROM1O43490 SNORD38C-201ENST00000384381 69 ntBASIC1.93□□□□□ -2.1
PROM1O43490 RNU6-1031P-201ENST00000384773 107 ntBASIC1.93□□□□□ -2.1
PROM1O43490 SNORD77.3-201ENST00000391113 65 ntBASIC1.93□□□□□ -2.1
PROM1O43490 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.93□□□□□ -2.1
PROM1O43490 AL445646.1-201ENST00000431784 216 ntBASIC1.93□□□□□ -2.1
PROM1O43490 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
PROM1O43490 MTATP6P21-201ENST00000440681 189 ntBASIC1.93□□□□□ -2.1
PROM1O43490 RNU7-107P-201ENST00000459121 61 ntBASIC1.93□□□□□ -2.1
PROM1O43490 RNA5SP57-201ENST00000459463 123 ntBASIC1.93□□□□□ -2.1
PROM1O43490 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.93□□□□□ -2.1
PROM1O43490 RNA5SP168-201ENST00000516642 112 ntBASIC1.93□□□□□ -2.1
PROM1O43490 RNU2-60P-201ENST00000517290 128 ntBASIC1.93□□□□□ -2.1
PROM1O43490 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.93□□□□□ -2.1
PROM1O43490 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.93□□□□□ -2.1
PROM1O43490 MIR4709-201ENST00000577272 72 ntBASIC1.93□□□□□ -2.1
PROM1O43490 AP000942.3-201ENST00000603702 160 ntBASIC1.93□□□□□ -2.1
PROM1O43490 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.93□□□□□ -2.1
PROM1O43490 AC134878.1-201ENST00000619901 243 ntBASIC1.93□□□□□ -2.1
PROM1O43490 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.92□□□□□ -2.1
PROM1O43490 MIRLET7C-201ENST00000362160 84 ntBASIC1.92□□□□□ -2.1
PROM1O43490 SNORD115-28-201ENST00000363931 81 ntBASIC1.92□□□□□ -2.1
PROM1O43490 RNU6-309P-201ENST00000364573 106 ntBASIC1.92□□□□□ -2.1
PROM1O43490 RNA5SP160-201ENST00000364866 120 ntBASIC1.92□□□□□ -2.1
PROM1O43490 RNU6-296P-201ENST00000384608 107 ntBASIC1.92□□□□□ -2.1
PROM1O43490 Y_RNA.547-201ENST00000384654 119 ntBASIC1.92□□□□□ -2.1
PROM1O43490 MIR891A-201ENST00000401237 79 ntBASIC1.92□□□□□ -2.1
PROM1O43490 RNU6-735P-201ENST00000410612 107 ntBASIC1.92□□□□□ -2.1
PROM1O43490 snoU13.27-201ENST00000459278 104 ntBASIC1.92□□□□□ -2.1
PROM1O43490 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.92□□□□□ -2.1
PROM1O43490 RNU6-1149P-201ENST00000516810 97 ntBASIC1.92□□□□□ -2.1
PROM1O43490 RNA5SP481-201ENST00000516814 122 ntBASIC1.92□□□□□ -2.1
PROM1O43490 RNU6-295P-201ENST00000516901 104 ntBASIC1.92□□□□□ -2.1
PROM1O43490 SNRPGP19-201ENST00000603826 189 ntBASIC1.92□□□□□ -2.1
PROM1O43490 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.92□□□□□ -2.1
PROM1O43490 Y_RNA.114-201ENST00000363265 113 ntBASIC1.91□□□□□ -2.1
PROM1O43490 RNU6-424P-201ENST00000384367 105 ntBASIC1.91□□□□□ -2.1
PROM1O43490 Y_RNA.525-201ENST00000384570 113 ntBASIC1.91□□□□□ -2.1
PROM1O43490 SNORA26.9-201ENST00000391322 122 ntBASIC1.91□□□□□ -2.1
PROM1O43490 AL603914.1-201ENST00000401964 204 ntBASIC1.91□□□□□ -2.1
PROM1O43490 SNRPGP14-201ENST00000435400 219 ntBASIC1.91□□□□□ -2.1
PROM1O43490 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms