Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.73□□□□□ -2.13
PHGDHO43175 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
PHGDHO43175 SNORD24-201ENST00000383884 75 ntBASIC1.72□□□□□ -2.13
PHGDHO43175 Y_RNA.464-201ENST00000384282 110 ntBASIC1.72□□□□□ -2.13
PHGDHO43175 MIR583-201ENST00000384846 75 ntBASIC1.72□□□□□ -2.13
PHGDHO43175 RNU7-121P-201ENST00000516604 62 ntBASIC1.72□□□□□ -2.13
PHGDHO43175 SNORA18.7-201ENST00000516910 131 ntBASIC1.72□□□□□ -2.13
PHGDHO43175 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.72□□□□□ -2.13
PHGDHO43175 RNU6-978P-201ENST00000364371 103 ntBASIC1.71□□□□□ -2.14
PHGDHO43175 SNORA1-201ENST00000384107 130 ntBASIC1.71□□□□□ -2.14
PHGDHO43175 Y_RNA.521-201ENST00000384560 114 ntBASIC1.71□□□□□ -2.14
PHGDHO43175 Y_RNA.547-201ENST00000384654 119 ntBASIC1.71□□□□□ -2.14
PHGDHO43175 RNU6-768P-201ENST00000384683 107 ntBASIC1.71□□□□□ -2.14
PHGDHO43175 MIR548A2-201ENST00000384956 97 ntBASIC1.71□□□□□ -2.14
PHGDHO43175 AC107027.2-201ENST00000512197 115 ntBASIC1.71□□□□□ -2.14
PHGDHO43175 RNA5SP445-201ENST00000515889 115 ntBASIC1.71□□□□□ -2.14
PHGDHO43175 RNU6-830P-201ENST00000516353 107 ntBASIC1.71□□□□□ -2.14
PHGDHO43175 RNU6-888P-201ENST00000363010 101 ntBASIC1.7□□□□□ -2.14
PHGDHO43175 Y_RNA.170-201ENST00000363746 110 ntBASIC1.7□□□□□ -2.14
PHGDHO43175 RNA5SP363-201ENST00000365072 115 ntBASIC1.7□□□□□ -2.14
PHGDHO43175 MIR518F-201ENST00000384973 87 ntBASIC1.7□□□□□ -2.14
PHGDHO43175 SNORA40.18-201ENST00000391200 128 ntBASIC1.7□□□□□ -2.14
PHGDHO43175 AC245517.4-201ENST00000448601 281 ntBASIC1.7□□□□□ -2.14
PHGDHO43175 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.7□□□□□ -2.14
PHGDHO43175 RNY1P11-201ENST00000363759 113 ntBASIC1.69□□□□□ -2.14
PHGDHO43175 RNU6-1062P-201ENST00000383908 107 ntBASIC1.69□□□□□ -2.14
PHGDHO43175 SNORD116-18-201ENST00000383961 92 ntBASIC1.69□□□□□ -2.14
PHGDHO43175 MIR504-201ENST00000385065 83 ntBASIC1.69□□□□□ -2.14
PHGDHO43175 SNORD41-201ENST00000386967 70 ntBASIC1.69□□□□□ -2.14
PHGDHO43175 SNORD123-201ENST00000459473 70 ntBASIC1.69□□□□□ -2.14
PHGDHO43175 AC005840.1-201ENST00000498412 377 ntBASIC1.69□□□□□ -2.14
PHGDHO43175 RNU6-250P-201ENST00000516958 103 ntBASIC1.69□□□□□ -2.14
PHGDHO43175 SNORA74.3-201ENST00000517108 154 ntBASIC1.69□□□□□ -2.14
PHGDHO43175 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
PHGDHO43175 MIR4285-201ENST00000581001 85 ntBASIC1.69□□□□□ -2.14
PHGDHO43175 AC084768.2-201ENST00000622736 221 ntBASIC1.69□□□□□ -2.14
PHGDHO43175 AL442644.1-201ENST00000454390 3105 ntBASIC1.69□□□□□ -2.14
PHGDHO43175 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.69□□□□□ -2.14
PHGDHO43175 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
PHGDHO43175 RNU6-774P-201ENST00000363238 107 ntBASIC1.68□□□□□ -2.14
PHGDHO43175 SNORD115-28-201ENST00000363931 81 ntBASIC1.68□□□□□ -2.14
PHGDHO43175 RNU6-1082P-201ENST00000364574 107 ntBASIC1.68□□□□□ -2.14
PHGDHO43175 Y_RNA.337-201ENST00000365312 102 ntBASIC1.68□□□□□ -2.14
PHGDHO43175 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
PHGDHO43175 Y_RNA.580-201ENST00000391004 95 ntBASIC1.68□□□□□ -2.14
PHGDHO43175 U8.17-201ENST00000391292 132 ntBASIC1.68□□□□□ -2.14
PHGDHO43175 RPS27P16-201ENST00000425758 201 ntBASIC1.68□□□□□ -2.14
PHGDHO43175 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.68□□□□□ -2.14
PHGDHO43175 AF228730.3-201ENST00000436691 102 ntBASIC1.68□□□□□ -2.14
PHGDHO43175 RNU4-57P-201ENST00000515980 135 ntBASIC1.68□□□□□ -2.14
PHGDHO43175 RNU6-346P-201ENST00000516288 111 ntBASIC1.68□□□□□ -2.14
PHGDHO43175 SNORD116-25-201ENST00000516517 92 ntBASIC1.68□□□□□ -2.14
PHGDHO43175 RNU7-181P-201ENST00000517234 74 ntBASIC1.68□□□□□ -2.14
PHGDHO43175 MIR3129-201ENST00000581095 76 ntBASIC1.68□□□□□ -2.14
PHGDHO43175 AL357312.1-201ENST00000603879 298 ntBASIC1.68□□□□□ -2.14
PHGDHO43175 GHRLOS.1-201ENST00000610995 70 ntBASIC1.68□□□□□ -2.14
PHGDHO43175 AL121890.5-201ENST00000620848 304 ntBASIC1.68□□□□□ -2.14
PHGDHO43175 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
PHGDHO43175 RNU6-151P-201ENST00000364158 107 ntBASIC1.67□□□□□ -2.14
PHGDHO43175 RNU6-449P-201ENST00000383914 107 ntBASIC1.67□□□□□ -2.14
PHGDHO43175 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.67□□□□□ -2.14
PHGDHO43175 RPL30P7-201ENST00000479312 323 ntBASIC1.67□□□□□ -2.14
PHGDHO43175 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.67□□□□□ -2.14
PHGDHO43175 SNORD111.1-201ENST00000516421 86 ntBASIC1.67□□□□□ -2.14
PHGDHO43175 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.67□□□□□ -2.14
PHGDHO43175 RNU6-1212P-201ENST00000517023 104 ntBASIC1.67□□□□□ -2.14
PHGDHO43175 MIR8081-201ENST00000611533 95 ntBASIC1.67□□□□□ -2.14
PHGDHO43175 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
PHGDHO43175 Y_RNA.393-201ENST00000383936 102 ntBASIC1.66□□□□□ -2.14
PHGDHO43175 RNU6-588P-201ENST00000410281 105 ntBASIC1.66□□□□□ -2.14
PHGDHO43175 RPL31P63-201ENST00000422565 375 ntBASIC1.66□□□□□ -2.14
PHGDHO43175 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.66□□□□□ -2.14
PHGDHO43175 RNU6-295P-201ENST00000516901 104 ntBASIC1.66□□□□□ -2.14
PHGDHO43175 RNU6-902P-201ENST00000517212 91 ntBASIC1.66□□□□□ -2.14
PHGDHO43175 AL512310.8-201ENST00000550183 120 ntBASIC1.66□□□□□ -2.14
PHGDHO43175 AC104984.5-201ENST00000586878 94 ntBASIC1.66□□□□□ -2.14
PHGDHO43175 MIR376A2-201ENST00000636782 80 ntBASIC1.66□□□□□ -2.14
PHGDHO43175 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
PHGDHO43175 SNORA1.2-201ENST00000365189 134 ntBASIC1.65□□□□□ -2.15
PHGDHO43175 RNU4-11P-201ENST00000365287 132 ntBASIC1.65□□□□□ -2.15
PHGDHO43175 Y_RNA.494-201ENST00000384432 111 ntBASIC1.65□□□□□ -2.15
PHGDHO43175 MIR520C-201ENST00000385005 87 ntBASIC1.65□□□□□ -2.15
PHGDHO43175 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.65□□□□□ -2.15
PHGDHO43175 U8.13-201ENST00000390842 128 ntBASIC1.65□□□□□ -2.15
PHGDHO43175 SNORD77.3-201ENST00000391113 65 ntBASIC1.65□□□□□ -2.15
PHGDHO43175 RNU6-938P-201ENST00000411285 103 ntBASIC1.65□□□□□ -2.15
PHGDHO43175 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.65□□□□□ -2.15
PHGDHO43175 RNU7-200P-201ENST00000516105 62 ntBASIC1.65□□□□□ -2.15
PHGDHO43175 RNU6-947P-201ENST00000516264 106 ntBASIC1.65□□□□□ -2.15
PHGDHO43175 RNU7-43P-201ENST00000516554 64 ntBASIC1.65□□□□□ -2.15
PHGDHO43175 DNAJC19P2-201ENST00000593340 302 ntBASIC1.65□□□□□ -2.15
PHGDHO43175 AC134878.1-201ENST00000619901 243 ntBASIC1.65□□□□□ -2.15
PHGDHO43175 Y_RNA.778-201ENST00000620203 90 ntBASIC1.65□□□□□ -2.15
PHGDHO43175 MIR6844-201ENST00000637122 62 ntBASIC1.65□□□□□ -2.15
PHGDHO43175 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.65□□□□□ -2.15
PHGDHO43175 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
PHGDHO43175 Y_RNA.37-201ENST00000362606 108 ntBASIC1.64□□□□□ -2.15
PHGDHO43175 RNU6-597P-201ENST00000365620 102 ntBASIC1.64□□□□□ -2.15
PHGDHO43175 Y_RNA.506-201ENST00000384494 102 ntBASIC1.64□□□□□ -2.15
PHGDHO43175 SNORD28B-201ENST00000390993 75 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms