Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1□□□□□ -2.25
E2F3O00716 Y_RNA.24-201ENST00000362508 103 ntBASIC1□□□□□ -2.25
E2F3O00716 Y_RNA.54-201ENST00000362766 105 ntBASIC1□□□□□ -2.25
E2F3O00716 SNORD72-201ENST00000390994 80 ntBASIC1□□□□□ -2.25
E2F3O00716 RNA5SP496-201ENST00000391240 109 ntBASIC1□□□□□ -2.25
E2F3O00716 SNORD11-201ENST00000459124 84 ntBASIC1□□□□□ -2.25
E2F3O00716 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1□□□□□ -2.25
E2F3O00716 AC008507.4-201ENST00000585464 127 ntBASIC1□□□□□ -2.25
E2F3O00716 U2.14-201ENST00000615943 113 ntBASIC1□□□□□ -2.25
E2F3O00716 Y_RNA.288-201ENST00000364854 92 ntBASIC0.99□□□□□ -2.25
E2F3O00716 RNU6-472P-201ENST00000384299 107 ntBASIC0.99□□□□□ -2.25
E2F3O00716 SNORA8.3-201ENST00000384679 139 ntBASIC0.99□□□□□ -2.25
E2F3O00716 MIR19B1-201ENST00000384829 87 ntBASIC0.99□□□□□ -2.25
E2F3O00716 MIR598-201ENST00000384868 97 ntBASIC0.99□□□□□ -2.25
E2F3O00716 MIR520C-201ENST00000385005 87 ntBASIC0.99□□□□□ -2.25
E2F3O00716 MIR15B-201ENST00000385045 98 ntBASIC0.99□□□□□ -2.25
E2F3O00716 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.99□□□□□ -2.25
E2F3O00716 AL118496.2-201ENST00000448300 230 ntBASIC0.99□□□□□ -2.25
E2F3O00716 RPL39P28-201ENST00000465655 155 ntBASIC0.99□□□□□ -2.25
E2F3O00716 MTCO2P24-201ENST00000515611 426 ntBASIC0.99□□□□□ -2.25
E2F3O00716 SNORA74.3-201ENST00000517108 154 ntBASIC0.99□□□□□ -2.25
E2F3O00716 uc_338.4-201ENST00000616635 176 ntBASIC0.99□□□□□ -2.25
E2F3O00716 AC099654.10-201ENST00000640395 161 ntBASIC0.99□□□□□ -2.25
E2F3O00716 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.99□□□□□ -2.25
E2F3O00716 AC068700.1-201ENST00000565862 3754 ntBASIC0.99□□□□□ -2.25
E2F3O00716 RNU6-268P-201ENST00000364174 107 ntBASIC0.98□□□□□ -2.25
E2F3O00716 RNU6-342P-201ENST00000384521 104 ntBASIC0.98□□□□□ -2.25
E2F3O00716 Y_RNA.587-201ENST00000391210 103 ntBASIC0.98□□□□□ -2.25
E2F3O00716 RNU6-651P-201ENST00000411040 105 ntBASIC0.98□□□□□ -2.25
E2F3O00716 RNU6-1054P-201ENST00000411293 104 ntBASIC0.98□□□□□ -2.25
E2F3O00716 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.98□□□□□ -2.25
E2F3O00716 SNORD111.1-201ENST00000516421 86 ntBASIC0.98□□□□□ -2.25
E2F3O00716 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.98□□□□□ -2.25
E2F3O00716 AC012433.1-201ENST00000588916 398 ntBASIC0.98□□□□□ -2.25
E2F3O00716 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
E2F3O00716 Pinc.1-201ENST00000616452 154 ntBASIC0.98□□□□□ -2.25
E2F3O00716 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.98□□□□□ -2.25
E2F3O00716 MIR373-201ENST00000362273 69 ntBASIC0.97□□□□□ -2.25
E2F3O00716 Y_RNA.133-201ENST00000363428 110 ntBASIC0.97□□□□□ -2.25
E2F3O00716 RNU4-38P-201ENST00000364472 129 ntBASIC0.97□□□□□ -2.25
E2F3O00716 Y_RNA.277-201ENST00000364754 102 ntBASIC0.97□□□□□ -2.25
E2F3O00716 MIR526A2-201ENST00000390198 65 ntBASIC0.97□□□□□ -2.25
E2F3O00716 AL603910.2-201ENST00000407268 136 ntBASIC0.97□□□□□ -2.25
E2F3O00716 POLR2J4-204ENST00000418424 324 ntBASIC0.97□□□□□ -2.25
E2F3O00716 AC063976.4-201ENST00000421971 163 ntBASIC0.97□□□□□ -2.25
E2F3O00716 MTCYBP9-201ENST00000431021 303 ntBASIC0.97□□□□□ -2.25
E2F3O00716 SNORD123-201ENST00000459473 70 ntBASIC0.97□□□□□ -2.25
E2F3O00716 RNU7-149P-201ENST00000516739 59 ntBASIC0.97□□□□□ -2.25
E2F3O00716 MIR4661-201ENST00000582720 75 ntBASIC0.97□□□□□ -2.25
E2F3O00716 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
E2F3O00716 Y_RNA.352-201ENST00000365439 102 ntBASIC0.96□□□□□ -2.26
E2F3O00716 Y_RNA.556-201ENST00000384677 113 ntBASIC0.96□□□□□ -2.26
E2F3O00716 Y_RNA.572-201ENST00000384757 98 ntBASIC0.96□□□□□ -2.26
E2F3O00716 MIR626-201ENST00000385032 94 ntBASIC0.96□□□□□ -2.26
E2F3O00716 SNORD12-201ENST00000391002 90 ntBASIC0.96□□□□□ -2.26
E2F3O00716 RNU2-38P-201ENST00000410856 79 ntBASIC0.96□□□□□ -2.26
E2F3O00716 AC245047.7-201ENST00000440265 293 ntBASIC0.96□□□□□ -2.26
E2F3O00716 SNORD127-201ENST00000458892 86 ntBASIC0.96□□□□□ -2.26
E2F3O00716 MIR5688-201ENST00000580619 83 ntBASIC0.96□□□□□ -2.26
E2F3O00716 MIR4764-201ENST00000580680 88 ntBASIC0.96□□□□□ -2.26
E2F3O00716 AL096861.1-201ENST00000610899 123 ntBASIC0.96□□□□□ -2.26
E2F3O00716 AC015726.2-201ENST00000620112 122 ntBASIC0.96□□□□□ -2.26
E2F3O00716 Y_RNA.82-201ENST00000363000 102 ntBASIC0.95□□□□□ -2.26
E2F3O00716 Y_RNA.92-201ENST00000363043 102 ntBASIC0.95□□□□□ -2.26
E2F3O00716 Y_RNA.235-201ENST00000364412 102 ntBASIC0.95□□□□□ -2.26
E2F3O00716 Y_RNA.306-201ENST00000365015 102 ntBASIC0.95□□□□□ -2.26
E2F3O00716 Y_RNA.312-201ENST00000365089 102 ntBASIC0.95□□□□□ -2.26
E2F3O00716 Y_RNA.322-201ENST00000365151 102 ntBASIC0.95□□□□□ -2.26
E2F3O00716 MIR568-201ENST00000385036 95 ntBASIC0.95□□□□□ -2.26
E2F3O00716 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.95□□□□□ -2.26
E2F3O00716 Y_RNA.650-201ENST00000459002 102 ntBASIC0.95□□□□□ -2.26
E2F3O00716 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.95□□□□□ -2.26
E2F3O00716 RN7SKP164-201ENST00000516138 266 ntBASIC0.95□□□□□ -2.26
E2F3O00716 Y_RNA.777-201ENST00000516982 102 ntBASIC0.95□□□□□ -2.26
E2F3O00716 Y_RNA.771-201ENST00000598668 102 ntBASIC0.95□□□□□ -2.26
E2F3O00716 AC211469.2-201ENST00000605461 205 ntBASIC0.95□□□□□ -2.26
E2F3O00716 AL020996.3-201ENST00000606617 222 ntBASIC0.95□□□□□ -2.26
E2F3O00716 MIR6857-201ENST00000613267 93 ntBASIC0.95□□□□□ -2.26
E2F3O00716 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.95□□□□□ -2.26
E2F3O00716 Y_RNA.789-201ENST00000622480 102 ntBASIC0.95□□□□□ -2.26
E2F3O00716 Y_RNA.416-201ENST00000384014 113 ntBASIC0.94□□□□□ -2.26
E2F3O00716 RNU6-1067P-201ENST00000384752 107 ntBASIC0.94□□□□□ -2.26
E2F3O00716 U8.17-201ENST00000391292 132 ntBASIC0.94□□□□□ -2.26
E2F3O00716 MIR548H3-201ENST00000408771 118 ntBASIC0.94□□□□□ -2.26
E2F3O00716 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.94□□□□□ -2.26
E2F3O00716 SNRPGP14-201ENST00000435400 219 ntBASIC0.94□□□□□ -2.26
E2F3O00716 AC002429.1-201ENST00000437672 148 ntBASIC0.94□□□□□ -2.26
E2F3O00716 AC245047.8-201ENST00000456455 284 ntBASIC0.94□□□□□ -2.26
E2F3O00716 RNU6-1132P-201ENST00000459214 107 ntBASIC0.94□□□□□ -2.26
E2F3O00716 SNORD124-201ENST00000459577 104 ntBASIC0.94□□□□□ -2.26
E2F3O00716 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.94□□□□□ -2.26
E2F3O00716 RNA5SP436-201ENST00000516020 115 ntBASIC0.94□□□□□ -2.26
E2F3O00716 RNU7-43P-201ENST00000516554 64 ntBASIC0.94□□□□□ -2.26
E2F3O00716 MIR548AR-201ENST00000582191 57 ntBASIC0.94□□□□□ -2.26
E2F3O00716 MIR3192-201ENST00000584920 77 ntBASIC0.94□□□□□ -2.26
E2F3O00716 AL021707.8-201ENST00000609428 183 ntBASIC0.94□□□□□ -2.26
E2F3O00716 AC006441.5-201ENST00000612680 209 ntBASIC0.94□□□□□ -2.26
E2F3O00716 AL365265.1-201ENST00000621045 234 ntBASIC0.94□□□□□ -2.26
E2F3O00716 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
E2F3O00716 Y_RNA.229-201ENST00000364347 113 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms