Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 SCARNA23-201ENST00000516060 130 ntBASIC2.53□□□□□ -2
RFXAPO00287 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.53□□□□□ -2
RFXAPO00287 DEFB131E-201ENST00000532329 154 ntBASIC2.53□□□□□ -2
RFXAPO00287 AC015726.2-201ENST00000620112 122 ntBASIC2.53□□□□□ -2
RFXAPO00287 MIR2052-201ENST00000636055 55 ntBASIC2.53□□□□□ -2
RFXAPO00287 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.53□□□□□ -2
RFXAPO00287 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.53□□□□□ -2
RFXAPO00287 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RFXAPO00287 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
RFXAPO00287 MIR342-201ENST00000362212 99 ntBASIC2.52□□□□□ -2.01
RFXAPO00287 RNU6-1099P-201ENST00000363533 107 ntBASIC2.52□□□□□ -2.01
RFXAPO00287 SNORA8-201ENST00000384574 139 ntBASIC2.52□□□□□ -2.01
RFXAPO00287 SNORA80E-201ENST00000384744 137 ntBASIC2.52□□□□□ -2.01
RFXAPO00287 MIR95-201ENST00000385072 81 ntBASIC2.52□□□□□ -2.01
RFXAPO00287 MIR759-201ENST00000390224 91 ntBASIC2.52□□□□□ -2.01
RFXAPO00287 MIR1255A-201ENST00000408338 113 ntBASIC2.52□□□□□ -2.01
RFXAPO00287 AL445687.1-201ENST00000439946 251 ntBASIC2.52□□□□□ -2.01
RFXAPO00287 AP003484.1-201ENST00000530974 250 ntBASIC2.52□□□□□ -2.01
RFXAPO00287 MIR3618-201ENST00000580330 88 ntBASIC2.52□□□□□ -2.01
RFXAPO00287 AP000942.3-201ENST00000603702 160 ntBASIC2.52□□□□□ -2.01
RFXAPO00287 AC091304.10-201ENST00000641554 121 ntBASIC2.52□□□□□ -2.01
RFXAPO00287 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.51□□□□□ -2.01
RFXAPO00287 RNU6-1125P-201ENST00000363601 107 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 RNA5SP456-201ENST00000364002 114 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 SNORD14E-201ENST00000364009 85 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 RNU6-497P-201ENST00000365316 104 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 Y_RNA.351-201ENST00000365436 96 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 RNU6-442P-201ENST00000383968 104 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 Y_RNA.494-201ENST00000384432 111 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 AL023284.1-201ENST00000403956 276 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 MIR1287-201ENST00000408492 90 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 AL512326.2-201ENST00000426359 151 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 MICF-203ENST00000432679 129 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 RNU1-131P-201ENST00000458943 161 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 AL163195.1-201ENST00000496941 348 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 RNU2-13P-201ENST00000515909 113 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 RNA5SP395-201ENST00000516567 118 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 RNU7-70P-201ENST00000516941 66 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 RNU6-56P-201ENST00000516986 93 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 RNU6-667P-201ENST00000517186 102 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 RNU6-1116P-201ENST00000517269 99 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 AP002004.2-201ENST00000531656 154 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 MIR3670-2-201ENST00000582974 65 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 MIR3670-1-201ENST00000584160 65 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 MIR3670-3-201ENST00000584855 65 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 MIR3670-4-201ENST00000612260 65 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 U7.3-201ENST00000616123 62 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 MIR1291-201ENST00000627649 87 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 Z82195.2-201ENST00000612348 18351 ntBASIC2.51□□□□□ -2.01
RFXAPO00287 RNU1-17P-201ENST00000363022 152 ntBASIC2.5□□□□□ -2.01
RFXAPO00287 CD24P4-201ENST00000382840 243 ntBASIC2.5□□□□□ -2.01
RFXAPO00287 MIR577-201ENST00000385196 96 ntBASIC2.5□□□□□ -2.01
RFXAPO00287 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RFXAPO00287 RN7SL297P-201ENST00000483161 293 ntBASIC2.5□□□□□ -2.01
RFXAPO00287 SNORD45.4-201ENST00000516629 73 ntBASIC2.5□□□□□ -2.01
RFXAPO00287 RNU1-142P-201ENST00000516682 145 ntBASIC2.5□□□□□ -2.01
RFXAPO00287 SNORA18.7-201ENST00000516910 131 ntBASIC2.5□□□□□ -2.01
RFXAPO00287 AL358944.1-201ENST00000528537 144 ntBASIC2.5□□□□□ -2.01
RFXAPO00287 MIR4762-201ENST00000585261 75 ntBASIC2.5□□□□□ -2.01
RFXAPO00287 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RFXAPO00287 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
RFXAPO00287 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
RFXAPO00287 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
RFXAPO00287 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RFXAPO00287 RNU6-1084P-201ENST00000362498 107 ntBASIC2.49□□□□□ -2.01
RFXAPO00287 U8.5-201ENST00000364528 136 ntBASIC2.49□□□□□ -2.01
RFXAPO00287 RNU6-787P-201ENST00000384032 107 ntBASIC2.49□□□□□ -2.01
RFXAPO00287 MIR605-201ENST00000385078 83 ntBASIC2.49□□□□□ -2.01
RFXAPO00287 RNA5SP323-201ENST00000391094 133 ntBASIC2.49□□□□□ -2.01
RFXAPO00287 BTF3P4-201ENST00000418852 495 ntBASIC2.49□□□□□ -2.01
RFXAPO00287 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.49□□□□□ -2.01
RFXAPO00287 SNORA48.11-201ENST00000517015 89 ntBASIC2.49□□□□□ -2.01
RFXAPO00287 MIR4474-201ENST00000579189 78 ntBASIC2.49□□□□□ -2.01
RFXAPO00287 MIR4781-201ENST00000585250 76 ntBASIC2.49□□□□□ -2.01
RFXAPO00287 AC025521.1-201ENST00000621624 286 ntBASIC2.49□□□□□ -2.01
RFXAPO00287 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.49□□□□□ -2.01
RFXAPO00287 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RFXAPO00287 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RFXAPO00287 AC245060.5-201ENST00000610778 3293 ntBASIC2.49□□□□□ -2.01
RFXAPO00287 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
RFXAPO00287 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.48□□□□□ -2.01
RFXAPO00287 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.48□□□□□ -2.01
RFXAPO00287 RNU6-170P-201ENST00000362832 104 ntBASIC2.48□□□□□ -2.01
RFXAPO00287 VTRNA1-1-201ENST00000363120 99 ntBASIC2.48□□□□□ -2.01
RFXAPO00287 RNU4-36P-201ENST00000364294 144 ntBASIC2.48□□□□□ -2.01
RFXAPO00287 Y_RNA.360-201ENST00000365512 102 ntBASIC2.48□□□□□ -2.01
RFXAPO00287 MIR1912-201ENST00000410389 80 ntBASIC2.48□□□□□ -2.01
RFXAPO00287 RNA5SP144-201ENST00000410846 116 ntBASIC2.48□□□□□ -2.01
RFXAPO00287 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
RFXAPO00287 RNU7-45P-201ENST00000459460 63 ntBASIC2.48□□□□□ -2.01
RFXAPO00287 RNU6-267P-201ENST00000516714 103 ntBASIC2.48□□□□□ -2.01
RFXAPO00287 AL353149.1-201ENST00000610667 244 ntBASIC2.48□□□□□ -2.01
RFXAPO00287 MIR5739-201ENST00000619803 80 ntBASIC2.48□□□□□ -2.01
RFXAPO00287 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RFXAPO00287 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
RFXAPO00287 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
RFXAPO00287 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
RFXAPO00287 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
RFXAPO00287 RNU6-862P-201ENST00000362804 105 ntBASIC2.47□□□□□ -2.01
RFXAPO00287 snoU2-30.1-201ENST00000365012 70 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms