Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 MIR6717-201ENST00000622747 73 ntBASIC-1.5□□□□□ -2.65
CPSF4LA6NMK7 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.51□□□□□ -2.65
CPSF4LA6NMK7 SNORA27-201ENST00000384323 126 ntBASIC-1.51□□□□□ -2.65
CPSF4LA6NMK7 RNU6-601P-201ENST00000384540 107 ntBASIC-1.51□□□□□ -2.65
CPSF4LA6NMK7 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.51□□□□□ -2.65
CPSF4LA6NMK7 AC098614.3-201ENST00000438957 440 ntBASIC-1.51□□□□□ -2.65
CPSF4LA6NMK7 MTND1P27-201ENST00000451117 902 ntBASIC-1.51□□□□□ -2.65
CPSF4LA6NMK7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.51□□□□□ -2.65
CPSF4LA6NMK7 RNU6-1114P-201ENST00000516022 107 ntBASIC-1.51□□□□□ -2.65
CPSF4LA6NMK7 RNA5SP67-201ENST00000516422 131 ntBASIC-1.51□□□□□ -2.65
CPSF4LA6NMK7 MTND5P40-201ENST00000559945 246 ntBASIC-1.51□□□□□ -2.65
CPSF4LA6NMK7 AC087752.4-201ENST00000605911 462 ntBASIC-1.51□□□□□ -2.65
CPSF4LA6NMK7 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.52□□□□□ -2.65
CPSF4LA6NMK7 RNU6-449P-201ENST00000383914 107 ntBASIC-1.52□□□□□ -2.65
CPSF4LA6NMK7 RNU2-61P-201ENST00000411069 191 ntBASIC-1.52□□□□□ -2.65
CPSF4LA6NMK7 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.52□□□□□ -2.65
CPSF4LA6NMK7 AL353813.1-201ENST00000440700 253 ntBASIC-1.52□□□□□ -2.65
CPSF4LA6NMK7 AC244090.1-201ENST00000441884 93 ntBASIC-1.52□□□□□ -2.65
CPSF4LA6NMK7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.52□□□□□ -2.65
CPSF4LA6NMK7 POLR3GP2-201ENST00000588366 668 ntBASIC-1.52□□□□□ -2.65
CPSF4LA6NMK7 PART1_1.1-201ENST00000611761 217 ntBASIC-1.52□□□□□ -2.65
CPSF4LA6NMK7 MIR409-201ENST00000362237 79 ntBASIC-1.53□□□□□ -2.65
CPSF4LA6NMK7 RNY1P13-201ENST00000365030 105 ntBASIC-1.53□□□□□ -2.65
CPSF4LA6NMK7 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.53□□□□□ -2.65
CPSF4LA6NMK7 SNORD77.3-201ENST00000391113 65 ntBASIC-1.53□□□□□ -2.65
CPSF4LA6NMK7 HLA-S-202ENST00000425174 53 ntBASIC-1.53□□□□□ -2.65
CPSF4LA6NMK7 CHEK2P4-201ENST00000450340 246 ntBASIC-1.53□□□□□ -2.65
CPSF4LA6NMK7 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.53□□□□□ -2.65
CPSF4LA6NMK7 AC245014.2-201ENST00000603689 287 ntBASIC-1.53□□□□□ -2.65
CPSF4LA6NMK7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.53□□□□□ -2.65
CPSF4LA6NMK7 DISC2.1-201ENST00000612827 205 ntBASIC-1.53□□□□□ -2.65
CPSF4LA6NMK7 AL512427.1-201ENST00000618593 349 ntBASIC-1.53□□□□□ -2.65
CPSF4LA6NMK7 RNA5SP133-201ENST00000363368 119 ntBASIC-1.54□□□□□ -2.66
CPSF4LA6NMK7 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.54□□□□□ -2.66
CPSF4LA6NMK7 RNU6-476P-201ENST00000384726 107 ntBASIC-1.54□□□□□ -2.66
CPSF4LA6NMK7 MIR1-2-201ENST00000384961 85 ntBASIC-1.54□□□□□ -2.66
CPSF4LA6NMK7 MIR599-201ENST00000385069 95 ntBASIC-1.54□□□□□ -2.66
CPSF4LA6NMK7 MIR519E-201ENST00000385075 84 ntBASIC-1.54□□□□□ -2.66
CPSF4LA6NMK7 RNU6-192P-201ENST00000391253 100 ntBASIC-1.54□□□□□ -2.66
CPSF4LA6NMK7 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.54□□□□□ -2.66
CPSF4LA6NMK7 GPR143P-201ENST00000434155 205 ntBASIC-1.54□□□□□ -2.66
CPSF4LA6NMK7 MIR5188-201ENST00000583467 113 ntBASIC-1.54□□□□□ -2.66
CPSF4LA6NMK7 AL607023.1-201ENST00000620045 248 ntBASIC-1.54□□□□□ -2.66
CPSF4LA6NMK7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.54□□□□□ -2.66
CPSF4LA6NMK7 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.55□□□□□ -2.66
CPSF4LA6NMK7 AL031003.1-201ENST00000404229 172 ntBASIC-1.55□□□□□ -2.66
CPSF4LA6NMK7 AC016907.1-201ENST00000419483 435 ntBASIC-1.55□□□□□ -2.66
CPSF4LA6NMK7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.55□□□□□ -2.66
CPSF4LA6NMK7 MTND3P1-201ENST00000441336 220 ntBASIC-1.55□□□□□ -2.66
CPSF4LA6NMK7 RNU6-998P-201ENST00000515894 101 ntBASIC-1.55□□□□□ -2.66
CPSF4LA6NMK7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.55□□□□□ -2.66
CPSF4LA6NMK7 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-1.55□□□□□ -2.66
CPSF4LA6NMK7 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.55□□□□□ -2.66
CPSF4LA6NMK7 MIR548AG2-201ENST00000581228 64 ntBASIC-1.55□□□□□ -2.66
CPSF4LA6NMK7 MIR4320-201ENST00000636981 65 ntBASIC-1.55□□□□□ -2.66
CPSF4LA6NMK7 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.56□□□□□ -2.66
CPSF4LA6NMK7 RNU6-108P-201ENST00000365558 107 ntBASIC-1.56□□□□□ -2.66
CPSF4LA6NMK7 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.56□□□□□ -2.66
CPSF4LA6NMK7 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.56□□□□□ -2.66
CPSF4LA6NMK7 SNORD116-12-201ENST00000384468 92 ntBASIC-1.56□□□□□ -2.66
CPSF4LA6NMK7 RNU6-588P-201ENST00000410281 105 ntBASIC-1.56□□□□□ -2.66
CPSF4LA6NMK7 MTND3P23-201ENST00000431980 347 ntBASIC-1.56□□□□□ -2.66
CPSF4LA6NMK7 AC097635.1-201ENST00000450678 155 ntBASIC-1.56□□□□□ -2.66
CPSF4LA6NMK7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.56□□□□□ -2.66
CPSF4LA6NMK7 RNU7-134P-201ENST00000458997 64 ntBASIC-1.56□□□□□ -2.66
CPSF4LA6NMK7 RNU6-625P-201ENST00000459412 107 ntBASIC-1.56□□□□□ -2.66
CPSF4LA6NMK7 RNU7-96P-201ENST00000459535 64 ntBASIC-1.56□□□□□ -2.66
CPSF4LA6NMK7 CCDC34P1-201ENST00000507441 517 ntBASIC-1.56□□□□□ -2.66
CPSF4LA6NMK7 RNU7-13P-201ENST00000516413 62 ntBASIC-1.56□□□□□ -2.66
CPSF4LA6NMK7 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.56□□□□□ -2.66
CPSF4LA6NMK7 AC055872.1-201ENST00000570978 278 ntBASIC-1.56□□□□□ -2.66
CPSF4LA6NMK7 MIR548H5-201ENST00000580314 60 ntBASIC-1.56□□□□□ -2.66
CPSF4LA6NMK7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.56□□□□□ -2.66
CPSF4LA6NMK7 AC009878.1-201ENST00000621819 340 ntBASIC-1.56□□□□□ -2.66
CPSF4LA6NMK7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.56□□□□□ -2.66
CPSF4LA6NMK7 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.57□□□□□ -2.66
CPSF4LA6NMK7 SNORD115-28-201ENST00000363931 81 ntBASIC-1.57□□□□□ -2.66
CPSF4LA6NMK7 RNU6-660P-201ENST00000364566 109 ntBASIC-1.57□□□□□ -2.66
CPSF4LA6NMK7 RNY1P2-201ENST00000364820 117 ntBASIC-1.57□□□□□ -2.66
CPSF4LA6NMK7 RNU6-933P-201ENST00000384424 107 ntBASIC-1.57□□□□□ -2.66
CPSF4LA6NMK7 MTCO2P16-201ENST00000436962 677 ntBASIC-1.57□□□□□ -2.66
CPSF4LA6NMK7 SNORD11-201ENST00000459124 84 ntBASIC-1.57□□□□□ -2.66
CPSF4LA6NMK7 RNU7-45P-201ENST00000459460 63 ntBASIC-1.57□□□□□ -2.66
CPSF4LA6NMK7 Vault.3-201ENST00000516676 95 ntBASIC-1.57□□□□□ -2.66
CPSF4LA6NMK7 AL442663.2-201ENST00000554385 511 ntBASIC-1.57□□□□□ -2.66
CPSF4LA6NMK7 MIR5591-201ENST00000578248 65 ntBASIC-1.57□□□□□ -2.66
CPSF4LA6NMK7 AC079248.2-201ENST00000623779 326 ntBASIC-1.57□□□□□ -2.66
CPSF4LA6NMK7 RNU5F-6P-201ENST00000362979 116 ntBASIC-1.58□□□□□ -2.66
CPSF4LA6NMK7 RNU6-931P-201ENST00000363850 107 ntBASIC-1.58□□□□□ -2.66
CPSF4LA6NMK7 SNORD114-17-201ENST00000364699 75 ntBASIC-1.58□□□□□ -2.66
CPSF4LA6NMK7 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.58□□□□□ -2.66
CPSF4LA6NMK7 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.58□□□□□ -2.66
CPSF4LA6NMK7 AC023449.1-201ENST00000454464 154 ntBASIC-1.58□□□□□ -2.66
CPSF4LA6NMK7 AC018714.1-201ENST00000605028 208 ntBASIC-1.58□□□□□ -2.66
CPSF4LA6NMK7 HULC.1-201ENST00000612720 240 ntBASIC-1.58□□□□□ -2.66
CPSF4LA6NMK7 AL133173.2-201ENST00000614270 90 ntBASIC-1.58□□□□□ -2.66
CPSF4LA6NMK7 AC073534.2-201ENST00000620377 381 ntBASIC-1.58□□□□□ -2.66
CPSF4LA6NMK7 U6.109-201ENST00000636749 87 ntBASIC-1.58□□□□□ -2.66
CPSF4LA6NMK7 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.58□□□□□ -2.66
CPSF4LA6NMK7 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.59□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms