Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 MIR626-201ENST00000385032 94 ntBASIC0.96□□□□□ -2.26
NKX6-3A6NJ46 MIR568-201ENST00000385036 95 ntBASIC0.96□□□□□ -2.26
NKX6-3A6NJ46 MIR1285-1-201ENST00000408593 84 ntBASIC0.96□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.622-201ENST00000411091 108 ntBASIC0.96□□□□□ -2.26
NKX6-3A6NJ46 AL591704.2-201ENST00000421658 181 ntBASIC0.96□□□□□ -2.26
NKX6-3A6NJ46 AC002429.1-201ENST00000437672 148 ntBASIC0.96□□□□□ -2.26
NKX6-3A6NJ46 AL118496.2-201ENST00000448300 230 ntBASIC0.96□□□□□ -2.26
NKX6-3A6NJ46 RPS26P48-201ENST00000491713 339 ntBASIC0.96□□□□□ -2.26
NKX6-3A6NJ46 SNORD116-28-201ENST00000516123 91 ntBASIC0.96□□□□□ -2.26
NKX6-3A6NJ46 RNU6-1045P-201ENST00000516321 107 ntBASIC0.96□□□□□ -2.26
NKX6-3A6NJ46 RNU6-453P-201ENST00000516819 85 ntBASIC0.96□□□□□ -2.26
NKX6-3A6NJ46 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.96□□□□□ -2.26
NKX6-3A6NJ46 AC100767.1-201ENST00000528178 123 ntBASIC0.96□□□□□ -2.26
NKX6-3A6NJ46 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.96□□□□□ -2.26
NKX6-3A6NJ46 AL353621.2-201ENST00000605340 133 ntBASIC0.96□□□□□ -2.26
NKX6-3A6NJ46 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.96□□□□□ -2.26
NKX6-3A6NJ46 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.96□□□□□ -2.26
NKX6-3A6NJ46 MIR4251-201ENST00000635819 61 ntBASIC0.96□□□□□ -2.26
NKX6-3A6NJ46 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
NKX6-3A6NJ46 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.122-201ENST00000363331 96 ntBASIC0.95□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.226-201ENST00000364337 114 ntBASIC0.95□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.370-201ENST00000365589 108 ntBASIC0.95□□□□□ -2.26
NKX6-3A6NJ46 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.95□□□□□ -2.26
NKX6-3A6NJ46 SNORD127-201ENST00000458892 86 ntBASIC0.95□□□□□ -2.26
NKX6-3A6NJ46 SNORD124-201ENST00000459577 104 ntBASIC0.95□□□□□ -2.26
NKX6-3A6NJ46 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.95□□□□□ -2.26
NKX6-3A6NJ46 SNORD77.4-201ENST00000516158 81 ntBASIC0.95□□□□□ -2.26
NKX6-3A6NJ46 RNU6-1270P-201ENST00000517128 108 ntBASIC0.95□□□□□ -2.26
NKX6-3A6NJ46 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.95□□□□□ -2.26
NKX6-3A6NJ46 AC023827.1-201ENST00000569247 97 ntBASIC0.95□□□□□ -2.26
NKX6-3A6NJ46 PRELID3BP2-201ENST00000605362 201 ntBASIC0.95□□□□□ -2.26
NKX6-3A6NJ46 AL365265.1-201ENST00000621045 234 ntBASIC0.95□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.133-201ENST00000363428 110 ntBASIC0.94□□□□□ -2.26
NKX6-3A6NJ46 snoU2_19.4-201ENST00000364329 80 ntBASIC0.94□□□□□ -2.26
NKX6-3A6NJ46 MIR1185-1-201ENST00000408598 86 ntBASIC0.94□□□□□ -2.26
NKX6-3A6NJ46 MIR1276-201ENST00000408707 83 ntBASIC0.94□□□□□ -2.26
NKX6-3A6NJ46 RNA5SP247-201ENST00000411181 105 ntBASIC0.94□□□□□ -2.26
NKX6-3A6NJ46 MTCYBP9-201ENST00000431021 303 ntBASIC0.94□□□□□ -2.26
NKX6-3A6NJ46 SNORD2.1-201ENST00000458762 69 ntBASIC0.94□□□□□ -2.26
NKX6-3A6NJ46 RNU4-57P-201ENST00000515980 135 ntBASIC0.94□□□□□ -2.26
NKX6-3A6NJ46 RNU6-693P-201ENST00000516134 107 ntBASIC0.94□□□□□ -2.26
NKX6-3A6NJ46 RNU6-830P-201ENST00000516353 107 ntBASIC0.94□□□□□ -2.26
NKX6-3A6NJ46 MIR4295-201ENST00000585286 85 ntBASIC0.94□□□□□ -2.26
NKX6-3A6NJ46 AC091895.1-201ENST00000624494 256 ntBASIC0.94□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.76-201ENST00000362931 109 ntBASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.82-201ENST00000363000 102 ntBASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.92-201ENST00000363043 102 ntBASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 RNA5SP48-201ENST00000363969 126 ntBASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.235-201ENST00000364412 102 ntBASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.242-201ENST00000364473 110 ntBASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.306-201ENST00000365015 102 ntBASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.312-201ENST00000365089 102 ntBASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.322-201ENST00000365151 102 ntBASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 RNU6-1138P-201ENST00000365359 106 ntBASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.352-201ENST00000365439 102 ntBASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 SNORA51.10-201ENST00000384418 136 ntBASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.650-201ENST00000459002 102 ntBASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 RNU7-21P-201ENST00000459430 62 ntBASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 AC087343.1-201ENST00000477341 475 ntBASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 SCARNA8-201ENST00000515924 131 ntBASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.777-201ENST00000516982 102 ntBASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 AC109810.1-201ENST00000534066 224 ntBASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.771-201ENST00000598668 102 ntBASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.789-201ENST00000622480 102 ntBASIC0.93□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.65-201ENST00000362846 100 ntBASIC0.92□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.199-201ENST00000364014 102 ntBASIC0.92□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.241-201ENST00000364470 117 ntBASIC0.92□□□□□ -2.26
NKX6-3A6NJ46 SNORA25.9-201ENST00000365087 128 ntBASIC0.92□□□□□ -2.26
NKX6-3A6NJ46 RNU6-574P-201ENST00000384265 107 ntBASIC0.92□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.494-201ENST00000384432 111 ntBASIC0.92□□□□□ -2.26
NKX6-3A6NJ46 MIR499A-201ENST00000384903 122 ntBASIC0.92□□□□□ -2.26
NKX6-3A6NJ46 RNU6-1228P-201ENST00000391014 107 ntBASIC0.92□□□□□ -2.26
NKX6-3A6NJ46 MIR1302-3-201ENST00000408128 138 ntBASIC0.92□□□□□ -2.26
NKX6-3A6NJ46 RNA5SP95-201ENST00000410319 137 ntBASIC0.92□□□□□ -2.26
NKX6-3A6NJ46 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.92□□□□□ -2.26
NKX6-3A6NJ46 RNU6-1132P-201ENST00000459214 107 ntBASIC0.92□□□□□ -2.26
NKX6-3A6NJ46 COX6CP14-201ENST00000469580 174 ntBASIC0.92□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.673-201ENST00000516306 88 ntBASIC0.92□□□□□ -2.26
NKX6-3A6NJ46 RNY3P16-201ENST00000516338 101 ntBASIC0.92□□□□□ -2.26
NKX6-3A6NJ46 RNA5SP102-201ENST00000516865 106 ntBASIC0.92□□□□□ -2.26
NKX6-3A6NJ46 AC007751.1-201ENST00000529260 376 ntBASIC0.92□□□□□ -2.26
NKX6-3A6NJ46 MIR4791-201ENST00000607666 84 ntBASIC0.92□□□□□ -2.26
NKX6-3A6NJ46 AC012676.2-201ENST00000619258 186 ntBASIC0.92□□□□□ -2.26
NKX6-3A6NJ46 Y_RNA.91-201ENST00000363042 107 ntBASIC0.91□□□□□ -2.26
NKX6-3A6NJ46 RNU6-654P-201ENST00000364373 107 ntBASIC0.91□□□□□ -2.26
NKX6-3A6NJ46 RNU6-1187P-201ENST00000364771 110 ntBASIC0.91□□□□□ -2.26
NKX6-3A6NJ46 SNORA1.2-201ENST00000365189 134 ntBASIC0.91□□□□□ -2.26
NKX6-3A6NJ46 SNORD61-201ENST00000384252 73 ntBASIC0.91□□□□□ -2.26
NKX6-3A6NJ46 RNU6-1067P-201ENST00000384752 107 ntBASIC0.91□□□□□ -2.26
NKX6-3A6NJ46 AL606845.1-201ENST00000404881 255 ntBASIC0.91□□□□□ -2.26
NKX6-3A6NJ46 RNU2-70P-201ENST00000410718 179 ntBASIC0.91□□□□□ -2.26
NKX6-3A6NJ46 RPS29P28-201ENST00000446439 141 ntBASIC0.91□□□□□ -2.26
NKX6-3A6NJ46 RNU7-90P-201ENST00000459216 62 ntBASIC0.91□□□□□ -2.26
NKX6-3A6NJ46 RNU6-1299P-201ENST00000516316 100 ntBASIC0.91□□□□□ -2.26
NKX6-3A6NJ46 RNU6-365P-201ENST00000517113 106 ntBASIC0.91□□□□□ -2.26
NKX6-3A6NJ46 MIR4719-201ENST00000585233 84 ntBASIC0.91□□□□□ -2.26
NKX6-3A6NJ46 MTND1P7-201ENST00000632801 297 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms