| DENND3 | A2RUS2 | RNU6-197P-201 | ENST00000516680 | 100 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | 5S_rRNA.3-201 | ENST00000517021 | 110 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | AC007751.1-201 | ENST00000529260 | 376 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | 5S_rRNA.19-201 | ENST00000612131 | 110 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | 5S_rRNA.18-201 | ENST00000621941 | 110 nt | BASIC | 1.7 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | AC068733.3-201 | ENST00000632757 | 269 nt | TSL 3 BASIC | 1.7 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | SNORD68-201 | ENST00000363214 | 84 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | Y_RNA.118-201 | ENST00000363300 | 101 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | SNORD50B-201 | ENST00000364995 | 70 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | Y_RNA.337-201 | ENST00000365312 | 102 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | SNORD113-1-201 | ENST00000365321 | 69 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | RNU6-81P-201 | ENST00000365608 | 104 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | Y_RNA.420-201 | ENST00000384043 | 110 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | Y_RNA.432-201 | ENST00000384087 | 111 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | Y_RNA.521-201 | ENST00000384560 | 114 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | AL049830.1-201 | ENST00000468034 | 425 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | Y_RNA.686-201 | ENST00000516548 | 134 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | RNU6-1234P-201 | ENST00000516877 | 103 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | RNU6-971P-201 | ENST00000516920 | 106 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | SNORA31.24-201 | ENST00000517232 | 57 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | RNA5SP437-201 | ENST00000517249 | 129 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | RNU2-60P-201 | ENST00000517290 | 128 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | LINC02277-202 | ENST00000556472 | 453 nt | TSL 3 BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | AC112693.2-201 | ENST00000556538 | 232 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | AC099850.3-201 | ENST00000577678 | 321 nt | TSL 3 BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | MIR378D2-201 | ENST00000580636 | 98 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | AL365222.1-201 | ENST00000614661 | 98 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | FANCD2-213 | ENST00000625535 | 117 nt | TSL 5 BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | LINC01359-207 | ENST00000634799 | 487 nt | TSL 5 BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | MIR376A2-201 | ENST00000636782 | 80 nt | BASIC | 1.69 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | UHRF1BP1L-203 | ENST00000545232 | 4088 nt | TSL 1 (best) BASIC | 1.68 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | AC010332.2-201 | ENST00000613083 | 1904 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | Y_RNA.218-201 | ENST00000364218 | 104 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | SNORD50.2-201 | ENST00000365465 | 70 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | Y_RNA.393-201 | ENST00000383936 | 102 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | RNY3P5-201 | ENST00000384127 | 102 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | SNORD61-201 | ENST00000384252 | 73 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | MIR548A2-201 | ENST00000384956 | 97 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | SNORD37.2-201 | ENST00000391075 | 66 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | ZNF468-202 | ENST00000396409 | 384 nt | TSL 5 BASIC | 1.68 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | AC004965.1-201 | ENST00000413033 | 213 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | AC245047.3-201 | ENST00000429428 | 127 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | AC122707.1-201 | ENST00000502882 | 219 nt | TSL 2 BASIC | 1.68 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | RNU6-1299P-201 | ENST00000516316 | 100 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | AC008507.4-201 | ENST00000585464 | 127 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | AC005786.1-201 | ENST00000588553 | 154 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | 5S_rRNA.11-201 | ENST00000618635 | 84 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | MIR8054-201 | ENST00000620877 | 86 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | MIR6844-201 | ENST00000637122 | 62 nt | BASIC | 1.68 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | CENPQ-201 | ENST00000335783 | 1733 nt | APPRIS P1 TSL 1 (best) BASIC | 1.68 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | MIR424-201 | ENST00000362227 | 98 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | Y_RNA.261-201 | ENST00000364631 | 102 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | MIR518E-201 | ENST00000385252 | 88 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | RNU6-440P-201 | ENST00000390882 | 105 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | AL353747.2-201 | ENST00000439207 | 205 nt | TSL 3 BASIC | 1.67 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | OR9P1P-201 | ENST00000496431 | 281 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | LINC02514-201 | ENST00000509058 | 498 nt | TSL 3 BASIC | 1.67 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | RNU6-1270P-201 | ENST00000517128 | 108 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | JPX_2.1-201 | ENST00000614161 | 69 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | AC091895.1-201 | ENST00000624494 | 256 nt | BASIC | 1.67 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | OR4C11-202 | ENST00000641580 | 2737 nt | APPRIS P1 BASIC | 1.67 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | ZNF209P-201 | ENST00000593450 | 2304 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | C9orf84-205 | ENST00000394779 | 5060 nt | APPRIS ALT2 TSL 2 BASIC | 1.66 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | MIRLET7C-201 | ENST00000362160 | 84 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | RNU6-296P-201 | ENST00000384608 | 107 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | RNU6-959P-201 | ENST00000384671 | 107 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | RNU2-70P-201 | ENST00000410718 | 179 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | SNRPGP14-201 | ENST00000435400 | 219 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | STAG3L5P-204 | ENST00000443759 | 179 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | ZFAT-AS1_2.1-201 | ENST00000613742 | 201 nt | BASIC | 1.66 | □□□□□ -2.14 | | |
| DENND3 | A2RUS2 | U8.1-201 | ENST00000362843 | 134 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | SNORA7.1-201 | ENST00000363750 | 139 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | Y_RNA.343-201 | ENST00000365354 | 112 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | RNU6-1138P-201 | ENST00000365359 | 106 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | Y_RNA.355-201 | ENST00000365462 | 98 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | RNU6-597P-201 | ENST00000365620 | 102 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | MIR1304-201 | ENST00000408243 | 91 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | MIR548I2-201 | ENST00000408348 | 149 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | AL136985.1-201 | ENST00000424592 | 395 nt | TSL 3 BASIC | 1.65 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | CALM2P4-201 | ENST00000430810 | 426 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | DIP2A-IT1-201 | ENST00000442434 | 428 nt | TSL 2 BASIC | 1.65 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | AC024995.1-201 | ENST00000523014 | 93 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | AP002004.2-201 | ENST00000531656 | 154 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | SUB1P4-201 | ENST00000566062 | 339 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | MIR3129-201 | ENST00000581095 | 76 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | MIR2681-201 | ENST00000581814 | 105 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | AC097639.2-201 | ENST00000603159 | 172 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | AP001485.1-201 | ENST00000604799 | 199 nt | BASIC | 1.65 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | CEP162-201 | ENST00000257766 | 5063 nt | TSL 1 (best) BASIC | 1.65 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | CHST9-202 | ENST00000581714 | 2043 nt | APPRIS P1 TSL 1 (best) BASIC | 1.64 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | RNU6-199P-201 | ENST00000362954 | 107 nt | BASIC | 1.64 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | Y_RNA.116-201 | ENST00000363292 | 103 nt | BASIC | 1.64 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | Y_RNA.327-201 | ENST00000365201 | 102 nt | BASIC | 1.64 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | RNU2-55P-201 | ENST00000411146 | 174 nt | BASIC | 1.64 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | AL590705.2-201 | ENST00000420204 | 281 nt | TSL 5 BASIC | 1.64 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | FTH1P12-201 | ENST00000432137 | 551 nt | BASIC | 1.64 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | AL353743.2-204 | ENST00000456242 | 419 nt | TSL 3 BASIC | 1.64 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | RNU6-1211P-201 | ENST00000459179 | 105 nt | BASIC | 1.64 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | NMTRQ-TTG12-1-201 | ENST00000467595 | 72 nt | BASIC | 1.64 | □□□□□ -2.15 | | |
| DENND3 | A2RUS2 | RNU2-56P-201 | ENST00000516826 | 190 nt | BASIC | 1.64 | □□□□□ -2.15 | | |