Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RNU6-746P-201ENST00000384112 109 ntBASIC2.13□□□□□ -2.07
CCDC163A0A0D9SF12 RNU6-187P-201ENST00000384139 106 ntBASIC2.13□□□□□ -2.07
CCDC163A0A0D9SF12 RNA5SP181-201ENST00000410246 98 ntBASIC2.13□□□□□ -2.07
CCDC163A0A0D9SF12 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC163A0A0D9SF12 HSPE1P24-201ENST00000450782 238 ntBASIC2.13□□□□□ -2.07
CCDC163A0A0D9SF12 snoU13.9-201ENST00000458927 103 ntBASIC2.13□□□□□ -2.07
CCDC163A0A0D9SF12 AC005908.1-201ENST00000468701 347 ntBASIC2.13□□□□□ -2.07
CCDC163A0A0D9SF12 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC163A0A0D9SF12 RNA5SP272-201ENST00000516095 111 ntBASIC2.13□□□□□ -2.07
CCDC163A0A0D9SF12 Y_RNA.703-201ENST00000516846 111 ntBASIC2.13□□□□□ -2.07
CCDC163A0A0D9SF12 RNU7-181P-201ENST00000517234 74 ntBASIC2.13□□□□□ -2.07
CCDC163A0A0D9SF12 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC163A0A0D9SF12 MIR4498-201ENST00000577599 66 ntBASIC2.13□□□□□ -2.07
CCDC163A0A0D9SF12 MIR548X2-201ENST00000579776 100 ntBASIC2.13□□□□□ -2.07
CCDC163A0A0D9SF12 AC134878.1-201ENST00000619901 243 ntBASIC2.13□□□□□ -2.07
CCDC163A0A0D9SF12 Y_RNA.4-201ENST00000362333 112 ntBASIC2.12□□□□□ -2.07
CCDC163A0A0D9SF12 AC008834.1-201ENST00000511612 175 ntBASIC2.12□□□□□ -2.07
CCDC163A0A0D9SF12 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.12□□□□□ -2.07
CCDC163A0A0D9SF12 SNORA77B-201ENST00000578179 125 ntBASIC2.12□□□□□ -2.07
CCDC163A0A0D9SF12 MIR6845-201ENST00000613182 61 ntBASIC2.12□□□□□ -2.07
CCDC163A0A0D9SF12 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC163A0A0D9SF12 Y_RNA.37-201ENST00000362606 108 ntBASIC2.11□□□□□ -2.07
CCDC163A0A0D9SF12 Y_RNA.343-201ENST00000365354 112 ntBASIC2.11□□□□□ -2.07
CCDC163A0A0D9SF12 SNORA20-201ENST00000384662 132 ntBASIC2.11□□□□□ -2.07
CCDC163A0A0D9SF12 MIR583-201ENST00000384846 75 ntBASIC2.11□□□□□ -2.07
CCDC163A0A0D9SF12 RNA5SP127-201ENST00000411051 133 ntBASIC2.11□□□□□ -2.07
CCDC163A0A0D9SF12 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC163A0A0D9SF12 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC163A0A0D9SF12 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CCDC163A0A0D9SF12 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CCDC163A0A0D9SF12 RNU1-17P-201ENST00000363022 152 ntBASIC2.1□□□□□ -2.07
CCDC163A0A0D9SF12 Y_RNA.542-201ENST00000384641 111 ntBASIC2.1□□□□□ -2.07
CCDC163A0A0D9SF12 SNORD77.3-201ENST00000391113 65 ntBASIC2.1□□□□□ -2.07
CCDC163A0A0D9SF12 U8.17-201ENST00000391292 132 ntBASIC2.1□□□□□ -2.07
CCDC163A0A0D9SF12 AL161935.2-201ENST00000414627 60 ntBASIC2.1□□□□□ -2.07
CCDC163A0A0D9SF12 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC163A0A0D9SF12 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.1□□□□□ -2.07
CCDC163A0A0D9SF12 AL137847.3-201ENST00000611521 109 ntBASIC2.1□□□□□ -2.07
CCDC163A0A0D9SF12 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC163A0A0D9SF12 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC163A0A0D9SF12 MIR342-201ENST00000362212 99 ntBASIC2.09□□□□□ -2.07
CCDC163A0A0D9SF12 Y_RNA.140-201ENST00000363474 103 ntBASIC2.09□□□□□ -2.07
CCDC163A0A0D9SF12 Y_RNA.241-201ENST00000364470 117 ntBASIC2.09□□□□□ -2.07
CCDC163A0A0D9SF12 SNORA2.2-201ENST00000365473 135 ntBASIC2.09□□□□□ -2.07
CCDC163A0A0D9SF12 RNU6-1189P-201ENST00000383958 107 ntBASIC2.09□□□□□ -2.07
CCDC163A0A0D9SF12 RNU6-322P-201ENST00000516010 103 ntBASIC2.09□□□□□ -2.07
CCDC163A0A0D9SF12 RNU6-917P-201ENST00000516294 104 ntBASIC2.09□□□□□ -2.07
CCDC163A0A0D9SF12 SNORD36C-201ENST00000516733 66 ntBASIC2.09□□□□□ -2.07
CCDC163A0A0D9SF12 AL365205.2-201ENST00000594586 68 ntBASIC2.09□□□□□ -2.07
CCDC163A0A0D9SF12 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
CCDC163A0A0D9SF12 WWP1P1-201ENST00000466609 2769 ntBASIC2.09□□□□□ -2.08
CCDC163A0A0D9SF12 RNY1P5-201ENST00000383890 115 ntBASIC2.08□□□□□ -2.08
CCDC163A0A0D9SF12 Y_RNA.584-201ENST00000391090 114 ntBASIC2.08□□□□□ -2.08
CCDC163A0A0D9SF12 AC092991.1-201ENST00000477176 376 ntBASIC2.08□□□□□ -2.08
CCDC163A0A0D9SF12 AC108729.3-201ENST00000513484 108 ntBASIC2.08□□□□□ -2.08
CCDC163A0A0D9SF12 RNU6-426P-201ENST00000516464 97 ntBASIC2.08□□□□□ -2.08
CCDC163A0A0D9SF12 RNU6-922P-201ENST00000516753 99 ntBASIC2.08□□□□□ -2.08
CCDC163A0A0D9SF12 AC019176.1-201ENST00000518519 225 ntBASIC2.08□□□□□ -2.08
CCDC163A0A0D9SF12 AP003484.1-201ENST00000530974 250 ntBASIC2.08□□□□□ -2.08
CCDC163A0A0D9SF12 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.08□□□□□ -2.08
CCDC163A0A0D9SF12 RNY1P11-201ENST00000363759 113 ntBASIC2.07□□□□□ -2.08
CCDC163A0A0D9SF12 Y_RNA.497-201ENST00000384447 98 ntBASIC2.07□□□□□ -2.08
CCDC163A0A0D9SF12 RNU6-460P-201ENST00000391158 108 ntBASIC2.07□□□□□ -2.08
CCDC163A0A0D9SF12 MIR934-201ENST00000401241 83 ntBASIC2.07□□□□□ -2.08
CCDC163A0A0D9SF12 AL451046.2-201ENST00000403074 277 ntBASIC2.07□□□□□ -2.08
CCDC163A0A0D9SF12 SNORD123-201ENST00000459473 70 ntBASIC2.07□□□□□ -2.08
CCDC163A0A0D9SF12 RNU6-1053P-201ENST00000515930 101 ntBASIC2.07□□□□□ -2.08
CCDC163A0A0D9SF12 RNU4-57P-201ENST00000515980 135 ntBASIC2.07□□□□□ -2.08
CCDC163A0A0D9SF12 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC163A0A0D9SF12 Y_RNA.370-201ENST00000365589 108 ntBASIC2.06□□□□□ -2.08
CCDC163A0A0D9SF12 SNORD18B-201ENST00000365659 72 ntBASIC2.06□□□□□ -2.08
CCDC163A0A0D9SF12 Y_RNA.410-201ENST00000383992 113 ntBASIC2.06□□□□□ -2.08
CCDC163A0A0D9SF12 MIR624-201ENST00000385217 97 ntBASIC2.06□□□□□ -2.08
CCDC163A0A0D9SF12 RPL31P63-201ENST00000422565 375 ntBASIC2.06□□□□□ -2.08
CCDC163A0A0D9SF12 AC087499.4-201ENST00000448505 178 ntBASIC2.06□□□□□ -2.08
CCDC163A0A0D9SF12 AC107297.1-201ENST00000459991 176 ntBASIC2.06□□□□□ -2.08
CCDC163A0A0D9SF12 RNU5E-3P-201ENST00000515913 68 ntBASIC2.06□□□□□ -2.08
CCDC163A0A0D9SF12 RNU6-830P-201ENST00000516353 107 ntBASIC2.06□□□□□ -2.08
CCDC163A0A0D9SF12 AC131055.1-201ENST00000584626 316 ntBASIC2.06□□□□□ -2.08
CCDC163A0A0D9SF12 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC163A0A0D9SF12 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC163A0A0D9SF12 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC163A0A0D9SF12 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC163A0A0D9SF12 RNU6-1292P-201ENST00000383856 107 ntBASIC2.05□□□□□ -2.08
CCDC163A0A0D9SF12 MIR570-201ENST00000384917 97 ntBASIC2.05□□□□□ -2.08
CCDC163A0A0D9SF12 MIR569-201ENST00000385228 96 ntBASIC2.05□□□□□ -2.08
CCDC163A0A0D9SF12 SNX2P2-201ENST00000424553 323 ntBASIC2.05□□□□□ -2.08
CCDC163A0A0D9SF12 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC163A0A0D9SF12 RNU6-947P-201ENST00000516264 106 ntBASIC2.05□□□□□ -2.08
CCDC163A0A0D9SF12 RNU7-70P-201ENST00000516941 66 ntBASIC2.05□□□□□ -2.08
CCDC163A0A0D9SF12 AC015688.6-201ENST00000577737 104 ntBASIC2.05□□□□□ -2.08
CCDC163A0A0D9SF12 MIR548AR-201ENST00000582191 57 ntBASIC2.05□□□□□ -2.08
CCDC163A0A0D9SF12 MIR4448-201ENST00000584360 86 ntBASIC2.05□□□□□ -2.08
CCDC163A0A0D9SF12 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC163A0A0D9SF12 AC091895.1-201ENST00000624494 256 ntBASIC2.05□□□□□ -2.08
CCDC163A0A0D9SF12 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.05□□□□□ -2.08
CCDC163A0A0D9SF12 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC163A0A0D9SF12 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC163A0A0D9SF12 Y_RNA.164-201ENST00000363709 102 ntBASIC2.04□□□□□ -2.08
CCDC163A0A0D9SF12 SNORD1A-201ENST00000364968 72 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms