Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MIR514B-201ENST00000516774 80 ntBASIC1.97□□□□□ -2.09
CCDC187A0A096LP49 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.97□□□□□ -2.09
CCDC187A0A096LP49 AP002004.2-201ENST00000531656 154 ntBASIC1.97□□□□□ -2.09
CCDC187A0A096LP49 AC133485.4-201ENST00000561835 220 ntBASIC1.97□□□□□ -2.09
CCDC187A0A096LP49 AC138907.4-201ENST00000570107 226 ntBASIC1.97□□□□□ -2.09
CCDC187A0A096LP49 AC242852.1-201ENST00000612151 96 ntBASIC1.97□□□□□ -2.09
CCDC187A0A096LP49 AC244015.1-201ENST00000622301 99 ntBASIC1.97□□□□□ -2.09
CCDC187A0A096LP49 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC187A0A096LP49 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC187A0A096LP49 Y_RNA.140-201ENST00000363474 103 ntBASIC1.96□□□□□ -2.1
CCDC187A0A096LP49 Y_RNA.486-201ENST00000384398 107 ntBASIC1.96□□□□□ -2.1
CCDC187A0A096LP49 RNU6-296P-201ENST00000384608 107 ntBASIC1.96□□□□□ -2.1
CCDC187A0A096LP49 RNA5SP100-201ENST00000410903 110 ntBASIC1.96□□□□□ -2.1
CCDC187A0A096LP49 RNA5SP59-201ENST00000410922 110 ntBASIC1.96□□□□□ -2.1
CCDC187A0A096LP49 AL606517.2-201ENST00000442855 241 ntBASIC1.96□□□□□ -2.1
CCDC187A0A096LP49 RNA5SP57-201ENST00000459463 123 ntBASIC1.96□□□□□ -2.1
CCDC187A0A096LP49 RNA5SP182-201ENST00000516064 82 ntBASIC1.96□□□□□ -2.1
CCDC187A0A096LP49 SNORA72.7-201ENST00000516349 94 ntBASIC1.96□□□□□ -2.1
CCDC187A0A096LP49 RNU6-1061P-201ENST00000516530 99 ntBASIC1.96□□□□□ -2.1
CCDC187A0A096LP49 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.96□□□□□ -2.1
CCDC187A0A096LP49 AP000942.3-201ENST00000603702 160 ntBASIC1.96□□□□□ -2.1
CCDC187A0A096LP49 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.96□□□□□ -2.1
CCDC187A0A096LP49 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.96□□□□□ -2.1
CCDC187A0A096LP49 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.96□□□□□ -2.1
CCDC187A0A096LP49 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CCDC187A0A096LP49 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CCDC187A0A096LP49 RNU4-52P-201ENST00000384209 138 ntBASIC1.95□□□□□ -2.1
CCDC187A0A096LP49 RNU6-950P-201ENST00000384651 107 ntBASIC1.95□□□□□ -2.1
CCDC187A0A096LP49 RNU2-70P-201ENST00000410718 179 ntBASIC1.95□□□□□ -2.1
CCDC187A0A096LP49 RNU2-7P-201ENST00000410794 178 ntBASIC1.95□□□□□ -2.1
CCDC187A0A096LP49 Y_RNA.621-201ENST00000411065 96 ntBASIC1.95□□□□□ -2.1
CCDC187A0A096LP49 NDUFA4P2-201ENST00000489989 244 ntBASIC1.95□□□□□ -2.1
CCDC187A0A096LP49 RNU7-149P-201ENST00000516739 59 ntBASIC1.95□□□□□ -2.1
CCDC187A0A096LP49 MIR4448-201ENST00000584360 86 ntBASIC1.95□□□□□ -2.1
CCDC187A0A096LP49 AC002984.1-201ENST00000591692 448 ntBASIC1.95□□□□□ -2.1
CCDC187A0A096LP49 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.95□□□□□ -2.1
CCDC187A0A096LP49 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC187A0A096LP49 SNORA1B-201ENST00000362535 133 ntBASIC1.94□□□□□ -2.1
CCDC187A0A096LP49 RNU1-17P-201ENST00000363022 152 ntBASIC1.94□□□□□ -2.1
CCDC187A0A096LP49 Y_RNA.338-201ENST00000365320 114 ntBASIC1.94□□□□□ -2.1
CCDC187A0A096LP49 SNORA1-201ENST00000384107 130 ntBASIC1.94□□□□□ -2.1
CCDC187A0A096LP49 MIR548A3-201ENST00000385297 97 ntBASIC1.94□□□□□ -2.1
CCDC187A0A096LP49 RNA5SP127-201ENST00000411051 133 ntBASIC1.94□□□□□ -2.1
CCDC187A0A096LP49 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC187A0A096LP49 MRPS17P9-201ENST00000511924 393 ntBASIC1.94□□□□□ -2.1
CCDC187A0A096LP49 RNA5SP481-201ENST00000516814 122 ntBASIC1.94□□□□□ -2.1
CCDC187A0A096LP49 MIR2681-201ENST00000581814 105 ntBASIC1.94□□□□□ -2.1
CCDC187A0A096LP49 AL022345.2-201ENST00000606307 135 ntBASIC1.94□□□□□ -2.1
CCDC187A0A096LP49 Y_RNA.783-201ENST00000613546 102 ntBASIC1.94□□□□□ -2.1
CCDC187A0A096LP49 MIR8054-201ENST00000620877 86 ntBASIC1.94□□□□□ -2.1
CCDC187A0A096LP49 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 RNU6-1080P-201ENST00000383982 107 ntBASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 RNU6-106P-201ENST00000384405 107 ntBASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 Y_RNA.495-201ENST00000384435 112 ntBASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 RNU6-880P-201ENST00000384526 107 ntBASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 MIR548A2-201ENST00000384956 97 ntBASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 Y_RNA.649-201ENST00000459077 103 ntBASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 AL049830.1-201ENST00000468034 425 ntBASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 OR9P1P-201ENST00000496431 281 ntBASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 RPL23AP63-201ENST00000498752 471 ntBASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 Y_RNA.694-201ENST00000516677 117 ntBASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 RNU7-28P-201ENST00000516759 62 ntBASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 RNA5SP437-201ENST00000517249 129 ntBASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 MIR4662B-201ENST00000579498 81 ntBASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 MIR5582-201ENST00000579697 68 ntBASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 AL096840.1-201ENST00000603287 93 ntBASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 AC025166.1-201ENST00000612411 163 ntBASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 Pinc.1-201ENST00000616452 154 ntBASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 AL359851.1-201ENST00000569460 4997 ntBASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 MTND5P18-201ENST00000445624 1801 ntBASIC1.93□□□□□ -2.1
CCDC187A0A096LP49 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC187A0A096LP49 MIR450A1-201ENST00000362262 91 ntBASIC1.92□□□□□ -2.1
CCDC187A0A096LP49 Y_RNA.281-201ENST00000364774 94 ntBASIC1.92□□□□□ -2.1
CCDC187A0A096LP49 MIR548A1-201ENST00000385041 97 ntBASIC1.92□□□□□ -2.1
CCDC187A0A096LP49 RNU6-440P-201ENST00000390882 105 ntBASIC1.92□□□□□ -2.1
CCDC187A0A096LP49 AL445685.2-201ENST00000422551 342 ntBASIC1.92□□□□□ -2.1
CCDC187A0A096LP49 CALM2P4-201ENST00000430810 426 ntBASIC1.92□□□□□ -2.1
CCDC187A0A096LP49 AC104435.1-201ENST00000483483 166 ntBASIC1.92□□□□□ -2.1
CCDC187A0A096LP49 SCARNA15-202ENST00000516881 127 ntBASIC1.92□□□□□ -2.1
CCDC187A0A096LP49 AC022254.1-201ENST00000567857 235 ntBASIC1.92□□□□□ -2.1
CCDC187A0A096LP49 MIR4713-201ENST00000582691 75 ntBASIC1.92□□□□□ -2.1
CCDC187A0A096LP49 uc_338.28-201ENST00000612082 187 ntBASIC1.92□□□□□ -2.1
CCDC187A0A096LP49 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC187A0A096LP49 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CCDC187A0A096LP49 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC187A0A096LP49 Y_RNA.116-201ENST00000363292 103 ntBASIC1.91□□□□□ -2.1
CCDC187A0A096LP49 Y_RNA.346-201ENST00000365385 112 ntBASIC1.91□□□□□ -2.1
CCDC187A0A096LP49 RNA5SP37-201ENST00000365420 130 ntBASIC1.91□□□□□ -2.1
CCDC187A0A096LP49 RNU6-1292P-201ENST00000383856 107 ntBASIC1.91□□□□□ -2.1
CCDC187A0A096LP49 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.91□□□□□ -2.1
CCDC187A0A096LP49 SNORA40.18-201ENST00000391200 128 ntBASIC1.91□□□□□ -2.1
CCDC187A0A096LP49 SNORA26-201ENST00000391286 122 ntBASIC1.91□□□□□ -2.1
CCDC187A0A096LP49 RN7SKP200-201ENST00000410564 320 ntBASIC1.91□□□□□ -2.1
CCDC187A0A096LP49 AL021397.1-201ENST00000451806 248 ntBASIC1.91□□□□□ -2.1
CCDC187A0A096LP49 RNU6-126P-201ENST00000516685 103 ntBASIC1.91□□□□□ -2.1
CCDC187A0A096LP49 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC187A0A096LP49 SNORA28-201ENST00000606769 126 ntBASIC1.91□□□□□ -2.1
CCDC187A0A096LP49 AL121890.5-201ENST00000620848 304 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms