Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC245047.8-201ENST00000456455 284 ntBASIC1.83□□□□□ -2.12
COL4A3BPQ9Y5P4 AP000942.3-201ENST00000603702 160 ntBASIC1.83□□□□□ -2.12
COL4A3BPQ9Y5P4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL4A3BPQ9Y5P4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
COL4A3BPQ9Y5P4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
COL4A3BPQ9Y5P4 Y_RNA.60-201ENST00000362831 98 ntBASIC1.82□□□□□ -2.12
COL4A3BPQ9Y5P4 RNU6-653P-201ENST00000363074 106 ntBASIC1.82□□□□□ -2.12
COL4A3BPQ9Y5P4 RNU6-103P-201ENST00000363686 107 ntBASIC1.82□□□□□ -2.12
COL4A3BPQ9Y5P4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.82□□□□□ -2.12
COL4A3BPQ9Y5P4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.82□□□□□ -2.12
COL4A3BPQ9Y5P4 MIR3122-201ENST00000577243 73 ntBASIC1.82□□□□□ -2.12
COL4A3BPQ9Y5P4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.82□□□□□ -2.12
COL4A3BPQ9Y5P4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
COL4A3BPQ9Y5P4 AL442644.1-201ENST00000454390 3105 ntBASIC1.81□□□□□ -2.12
COL4A3BPQ9Y5P4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
COL4A3BPQ9Y5P4 RNU6-1228P-201ENST00000391014 107 ntBASIC1.81□□□□□ -2.12
COL4A3BPQ9Y5P4 AC108667.1-201ENST00000428618 249 ntBASIC1.81□□□□□ -2.12
COL4A3BPQ9Y5P4 MTND1P19-201ENST00000511780 315 ntBASIC1.81□□□□□ -2.12
COL4A3BPQ9Y5P4 RNU6-947P-201ENST00000516264 106 ntBASIC1.81□□□□□ -2.12
COL4A3BPQ9Y5P4 RNU7-43P-201ENST00000516554 64 ntBASIC1.81□□□□□ -2.12
COL4A3BPQ9Y5P4 SNORA18.7-201ENST00000516910 131 ntBASIC1.81□□□□□ -2.12
COL4A3BPQ9Y5P4 AC015726.2-201ENST00000620112 122 ntBASIC1.81□□□□□ -2.12
COL4A3BPQ9Y5P4 Y_RNA.269-201ENST00000364685 89 ntBASIC1.8□□□□□ -2.12
COL4A3BPQ9Y5P4 RNY4P28-201ENST00000365281 93 ntBASIC1.8□□□□□ -2.12
COL4A3BPQ9Y5P4 Y_RNA.539-201ENST00000384635 107 ntBASIC1.8□□□□□ -2.12
COL4A3BPQ9Y5P4 Y_RNA.572-201ENST00000384757 98 ntBASIC1.8□□□□□ -2.12
COL4A3BPQ9Y5P4 SNORA67.5-201ENST00000391036 107 ntBASIC1.8□□□□□ -2.12
COL4A3BPQ9Y5P4 RNU6-381P-201ENST00000391259 108 ntBASIC1.8□□□□□ -2.12
COL4A3BPQ9Y5P4 SNORD123-201ENST00000459473 70 ntBASIC1.8□□□□□ -2.12
COL4A3BPQ9Y5P4 AC011921.3-201ENST00000605540 361 ntBASIC1.8□□□□□ -2.12
COL4A3BPQ9Y5P4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
COL4A3BPQ9Y5P4 MIR520C-201ENST00000385005 87 ntBASIC1.79□□□□□ -2.12
COL4A3BPQ9Y5P4 RNU6-1299P-201ENST00000516316 100 ntBASIC1.79□□□□□ -2.12
COL4A3BPQ9Y5P4 RNU6-165P-201ENST00000517170 99 ntBASIC1.79□□□□□ -2.12
COL4A3BPQ9Y5P4 SNORA1.2-201ENST00000365189 134 ntBASIC1.78□□□□□ -2.12
COL4A3BPQ9Y5P4 RNU6-1067P-201ENST00000384752 107 ntBASIC1.78□□□□□ -2.12
COL4A3BPQ9Y5P4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.78□□□□□ -2.12
COL4A3BPQ9Y5P4 SNRPGP13-201ENST00000442212 177 ntBASIC1.78□□□□□ -2.12
COL4A3BPQ9Y5P4 RPS29P23-201ENST00000458635 123 ntBASIC1.78□□□□□ -2.12
COL4A3BPQ9Y5P4 RNU6-365P-201ENST00000517113 106 ntBASIC1.78□□□□□ -2.12
COL4A3BPQ9Y5P4 MIR4303-201ENST00000581299 66 ntBASIC1.78□□□□□ -2.12
COL4A3BPQ9Y5P4 AL161722.3-201ENST00000605789 2983 ntBASIC1.77□□□□□ -2.13
COL4A3BPQ9Y5P4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.77□□□□□ -2.13
COL4A3BPQ9Y5P4 Y_RNA.188-201ENST00000363952 111 ntBASIC1.77□□□□□ -2.13
COL4A3BPQ9Y5P4 snoU2_19.4-201ENST00000364329 80 ntBASIC1.77□□□□□ -2.13
COL4A3BPQ9Y5P4 RNA5SP363-201ENST00000365072 115 ntBASIC1.77□□□□□ -2.13
COL4A3BPQ9Y5P4 Y_RNA.432-201ENST00000384087 111 ntBASIC1.77□□□□□ -2.13
COL4A3BPQ9Y5P4 AL606845.1-201ENST00000404881 255 ntBASIC1.77□□□□□ -2.13
COL4A3BPQ9Y5P4 MIR548O-201ENST00000408583 114 ntBASIC1.77□□□□□ -2.13
COL4A3BPQ9Y5P4 RNU1-98P-201ENST00000458992 160 ntBASIC1.77□□□□□ -2.13
COL4A3BPQ9Y5P4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.77□□□□□ -2.13
COL4A3BPQ9Y5P4 Y_RNA.680-201ENST00000516441 93 ntBASIC1.77□□□□□ -2.13
COL4A3BPQ9Y5P4 RNY1-201ENST00000364228 113 ntBASIC1.76□□□□□ -2.13
COL4A3BPQ9Y5P4 SNORD26-201ENST00000384147 75 ntBASIC1.76□□□□□ -2.13
COL4A3BPQ9Y5P4 Y_RNA.486-201ENST00000384398 107 ntBASIC1.76□□□□□ -2.13
COL4A3BPQ9Y5P4 RNU2-70P-201ENST00000410718 179 ntBASIC1.76□□□□□ -2.13
COL4A3BPQ9Y5P4 Y_RNA.626-201ENST00000411288 95 ntBASIC1.76□□□□□ -2.13
COL4A3BPQ9Y5P4 SNORA31.4-201ENST00000516049 129 ntBASIC1.76□□□□□ -2.13
COL4A3BPQ9Y5P4 RNA5SP153-201ENST00000516498 76 ntBASIC1.76□□□□□ -2.13
COL4A3BPQ9Y5P4 RNU6-111P-201ENST00000517179 105 ntBASIC1.76□□□□□ -2.13
COL4A3BPQ9Y5P4 MIR4764-201ENST00000580680 88 ntBASIC1.76□□□□□ -2.13
COL4A3BPQ9Y5P4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
COL4A3BPQ9Y5P4 RNA5SP48-201ENST00000363969 126 ntBASIC1.75□□□□□ -2.13
COL4A3BPQ9Y5P4 Y_RNA.199-201ENST00000364014 102 ntBASIC1.75□□□□□ -2.13
COL4A3BPQ9Y5P4 Y_RNA.308-201ENST00000365043 101 ntBASIC1.75□□□□□ -2.13
COL4A3BPQ9Y5P4 SNORD24-201ENST00000383884 75 ntBASIC1.75□□□□□ -2.13
COL4A3BPQ9Y5P4 U8.17-201ENST00000391292 132 ntBASIC1.75□□□□□ -2.13
COL4A3BPQ9Y5P4 SNORA79-201ENST00000408376 140 ntBASIC1.75□□□□□ -2.13
COL4A3BPQ9Y5P4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.75□□□□□ -2.13
COL4A3BPQ9Y5P4 RNU6-504P-201ENST00000516568 104 ntBASIC1.75□□□□□ -2.13
COL4A3BPQ9Y5P4 RNU6-728P-201ENST00000365375 104 ntBASIC1.74□□□□□ -2.13
COL4A3BPQ9Y5P4 MT-TG-201ENST00000387429 68 ntBASIC1.74□□□□□ -2.13
COL4A3BPQ9Y5P4 MT-TT-201ENST00000387460 66 ntBASIC1.74□□□□□ -2.13
COL4A3BPQ9Y5P4 RNU4-62P-201ENST00000410125 130 ntBASIC1.74□□□□□ -2.13
COL4A3BPQ9Y5P4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.74□□□□□ -2.13
COL4A3BPQ9Y5P4 RNU6-1271P-201ENST00000517049 105 ntBASIC1.74□□□□□ -2.13
COL4A3BPQ9Y5P4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A3BPQ9Y5P4 SNORD53B-201ENST00000577887 78 ntBASIC1.74□□□□□ -2.13
COL4A3BPQ9Y5P4 BX248123.2-201ENST00000606318 124 ntBASIC1.74□□□□□ -2.13
COL4A3BPQ9Y5P4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.74□□□□□ -2.13
COL4A3BPQ9Y5P4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.74□□□□□ -2.13
COL4A3BPQ9Y5P4 Y_RNA.7-201ENST00000362352 102 ntBASIC1.73□□□□□ -2.13
COL4A3BPQ9Y5P4 Y_RNA.121-201ENST00000363309 113 ntBASIC1.73□□□□□ -2.13
COL4A3BPQ9Y5P4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.73□□□□□ -2.13
COL4A3BPQ9Y5P4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.73□□□□□ -2.13
COL4A3BPQ9Y5P4 SCARNA8-201ENST00000515924 131 ntBASIC1.73□□□□□ -2.13
COL4A3BPQ9Y5P4 Y_RNA.666-201ENST00000516187 112 ntBASIC1.73□□□□□ -2.13
COL4A3BPQ9Y5P4 RNU7-25P-201ENST00000516544 62 ntBASIC1.73□□□□□ -2.13
COL4A3BPQ9Y5P4 RNU6-453P-201ENST00000516819 85 ntBASIC1.73□□□□□ -2.13
COL4A3BPQ9Y5P4 AL160236.1-201ENST00000556317 195 ntBASIC1.73□□□□□ -2.13
COL4A3BPQ9Y5P4 AL096861.1-201ENST00000610899 123 ntBASIC1.73□□□□□ -2.13
COL4A3BPQ9Y5P4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL4A3BPQ9Y5P4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
COL4A3BPQ9Y5P4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.72□□□□□ -2.13
COL4A3BPQ9Y5P4 Y_RNA.547-201ENST00000384654 119 ntBASIC1.72□□□□□ -2.13
COL4A3BPQ9Y5P4 RNU6-997P-201ENST00000384725 107 ntBASIC1.72□□□□□ -2.13
COL4A3BPQ9Y5P4 Y_RNA.622-201ENST00000411091 108 ntBASIC1.72□□□□□ -2.13
COL4A3BPQ9Y5P4 SNORA31.2-201ENST00000516019 134 ntBASIC1.72□□□□□ -2.13
COL4A3BPQ9Y5P4 MIR4744-201ENST00000581563 82 ntBASIC1.72□□□□□ -2.13
COL4A3BPQ9Y5P4 AL645939.4-201ENST00000604495 135 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms