Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 U8.16-201ENST00000391279 133 ntBASIC3.46□□□□□ -1.86
PCDHB3Q9Y5E6 Z98742.3-201ENST00000418637 326 ntBASIC3.46□□□□□ -1.86
PCDHB3Q9Y5E6 RNU7-73P-201ENST00000458743 63 ntBASIC3.46□□□□□ -1.86
PCDHB3Q9Y5E6 RN7SL601P-201ENST00000471221 293 ntBASIC3.46□□□□□ -1.86
PCDHB3Q9Y5E6 RNU6-523P-201ENST00000516304 54 ntBASIC3.46□□□□□ -1.86
PCDHB3Q9Y5E6 AC008011.1-201ENST00000545989 227 ntBASIC3.46□□□□□ -1.86
PCDHB3Q9Y5E6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHB3Q9Y5E6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHB3Q9Y5E6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHB3Q9Y5E6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHB3Q9Y5E6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHB3Q9Y5E6 SNORA26.7-201ENST00000391288 122 ntBASIC3.45□□□□□ -1.86
PCDHB3Q9Y5E6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHB3Q9Y5E6 RNU7-35P-201ENST00000517174 62 ntBASIC3.45□□□□□ -1.86
PCDHB3Q9Y5E6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHB3Q9Y5E6 MIR3169-201ENST00000578032 83 ntBASIC3.45□□□□□ -1.86
PCDHB3Q9Y5E6 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDHB3Q9Y5E6 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
PCDHB3Q9Y5E6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHB3Q9Y5E6 RNU6-865P-201ENST00000364772 107 ntBASIC3.44□□□□□ -1.86
PCDHB3Q9Y5E6 Y_RNA.448-201ENST00000384185 108 ntBASIC3.44□□□□□ -1.86
PCDHB3Q9Y5E6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PCDHB3Q9Y5E6 RNU6-129P-201ENST00000391022 107 ntBASIC3.44□□□□□ -1.86
PCDHB3Q9Y5E6 SPINT5P-201ENST00000448174 155 ntBASIC3.44□□□□□ -1.86
PCDHB3Q9Y5E6 RNU6-579P-201ENST00000516879 102 ntBASIC3.44□□□□□ -1.86
PCDHB3Q9Y5E6 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHB3Q9Y5E6 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHB3Q9Y5E6 MIR3200-201ENST00000580767 85 ntBASIC3.44□□□□□ -1.86
PCDHB3Q9Y5E6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHB3Q9Y5E6 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHB3Q9Y5E6 AC092435.3-201ENST00000565538 3654 ntBASIC3.43□□□□□ -1.86
PCDHB3Q9Y5E6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHB3Q9Y5E6 MIR30E-201ENST00000362104 92 ntBASIC3.43□□□□□ -1.86
PCDHB3Q9Y5E6 Y_RNA.173-201ENST00000363776 113 ntBASIC3.43□□□□□ -1.86
PCDHB3Q9Y5E6 RNU6-478P-201ENST00000363904 110 ntBASIC3.43□□□□□ -1.86
PCDHB3Q9Y5E6 SNORA11.4-201ENST00000408823 129 ntBASIC3.43□□□□□ -1.86
PCDHB3Q9Y5E6 SCARNA13-201ENST00000516672 275 ntBASIC3.43□□□□□ -1.86
PCDHB3Q9Y5E6 AC022149.2-201ENST00000621061 203 ntBASIC3.43□□□□□ -1.86
PCDHB3Q9Y5E6 AC022513.1-201ENST00000624512 117 ntBASIC3.43□□□□□ -1.86
PCDHB3Q9Y5E6 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.43□□□□□ -1.86
PCDHB3Q9Y5E6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHB3Q9Y5E6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
PCDHB3Q9Y5E6 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHB3Q9Y5E6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHB3Q9Y5E6 MIR181B2-201ENST00000385004 89 ntBASIC3.42□□□□□ -1.86
PCDHB3Q9Y5E6 MIR634-201ENST00000385208 97 ntBASIC3.42□□□□□ -1.86
PCDHB3Q9Y5E6 AC003685.2-201ENST00000422795 395 ntBASIC3.42□□□□□ -1.86
PCDHB3Q9Y5E6 AC245047.7-201ENST00000440265 293 ntBASIC3.42□□□□□ -1.86
PCDHB3Q9Y5E6 RNU7-153P-201ENST00000516455 62 ntBASIC3.42□□□□□ -1.86
PCDHB3Q9Y5E6 SNORD67.1-201ENST00000516618 108 ntBASIC3.42□□□□□ -1.86
PCDHB3Q9Y5E6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.42□□□□□ -1.86
PCDHB3Q9Y5E6 AC243994.1-201ENST00000618627 109 ntBASIC3.42□□□□□ -1.86
PCDHB3Q9Y5E6 Y_RNA.788-201ENST00000622394 112 ntBASIC3.42□□□□□ -1.86
PCDHB3Q9Y5E6 AP003355.3-201ENST00000623465 114 ntBASIC3.42□□□□□ -1.86
PCDHB3Q9Y5E6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHB3Q9Y5E6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHB3Q9Y5E6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHB3Q9Y5E6 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHB3Q9Y5E6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHB3Q9Y5E6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHB3Q9Y5E6 Y_RNA.57-201ENST00000362806 113 ntBASIC3.41□□□□□ -1.86
PCDHB3Q9Y5E6 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PCDHB3Q9Y5E6 RNU6-220P-201ENST00000390919 107 ntBASIC3.41□□□□□ -1.86
PCDHB3Q9Y5E6 HMGN1P33-201ENST00000432945 451 ntBASIC3.41□□□□□ -1.86
PCDHB3Q9Y5E6 HSPE1P9-201ENST00000440046 311 ntBASIC3.41□□□□□ -1.86
PCDHB3Q9Y5E6 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHB3Q9Y5E6 RPS29P12-201ENST00000460178 152 ntBASIC3.41□□□□□ -1.86
PCDHB3Q9Y5E6 RNU2-27P-201ENST00000516185 142 ntBASIC3.41□□□□□ -1.86
PCDHB3Q9Y5E6 RNA5SP168-201ENST00000516642 112 ntBASIC3.41□□□□□ -1.86
PCDHB3Q9Y5E6 SNORA70.19-201ENST00000516717 90 ntBASIC3.41□□□□□ -1.86
PCDHB3Q9Y5E6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHB3Q9Y5E6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHB3Q9Y5E6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHB3Q9Y5E6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHB3Q9Y5E6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
PCDHB3Q9Y5E6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PCDHB3Q9Y5E6 RNU6-1094P-201ENST00000362416 104 ntBASIC3.4□□□□□ -1.87
PCDHB3Q9Y5E6 RNU6-23P-201ENST00000363283 107 ntBASIC3.4□□□□□ -1.87
PCDHB3Q9Y5E6 SNORA38.1-201ENST00000364172 131 ntBASIC3.4□□□□□ -1.87
PCDHB3Q9Y5E6 MIR452-201ENST00000385020 85 ntBASIC3.4□□□□□ -1.87
PCDHB3Q9Y5E6 SNORD28B-201ENST00000390993 75 ntBASIC3.4□□□□□ -1.87
PCDHB3Q9Y5E6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHB3Q9Y5E6 RNU7-12P-201ENST00000516030 62 ntBASIC3.4□□□□□ -1.87
PCDHB3Q9Y5E6 SNORA25.13-201ENST00000516395 103 ntBASIC3.4□□□□□ -1.87
PCDHB3Q9Y5E6 AC026333.2-201ENST00000542164 106 ntBASIC3.4□□□□□ -1.87
PCDHB3Q9Y5E6 AC012676.2-201ENST00000619258 186 ntBASIC3.4□□□□□ -1.87
PCDHB3Q9Y5E6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDHB3Q9Y5E6 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHB3Q9Y5E6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
PCDHB3Q9Y5E6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
PCDHB3Q9Y5E6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHB3Q9Y5E6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHB3Q9Y5E6 MIR136-201ENST00000385207 82 ntBASIC3.39□□□□□ -1.87
PCDHB3Q9Y5E6 RNU6-1321P-201ENST00000390905 107 ntBASIC3.39□□□□□ -1.87
PCDHB3Q9Y5E6 AL034345.1-201ENST00000407768 123 ntBASIC3.39□□□□□ -1.87
PCDHB3Q9Y5E6 BX510359.1-201ENST00000456973 237 ntBASIC3.39□□□□□ -1.87
PCDHB3Q9Y5E6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.39□□□□□ -1.87
PCDHB3Q9Y5E6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHB3Q9Y5E6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHB3Q9Y5E6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms