Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 RNU6-1292P-201ENST00000383856 107 ntBASIC2.56□□□□□ -2
ZNRF3Q9ULT6 SNORD38C-201ENST00000384381 69 ntBASIC2.56□□□□□ -2
ZNRF3Q9ULT6 MIR524-201ENST00000385242 87 ntBASIC2.56□□□□□ -2
ZNRF3Q9ULT6 RNA5SP450-201ENST00000411206 102 ntBASIC2.56□□□□□ -2
ZNRF3Q9ULT6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.56□□□□□ -2
ZNRF3Q9ULT6 RNA5SP437-201ENST00000517249 129 ntBASIC2.56□□□□□ -2
ZNRF3Q9ULT6 MIR4709-201ENST00000577272 72 ntBASIC2.56□□□□□ -2
ZNRF3Q9ULT6 MIR4498-201ENST00000577599 66 ntBASIC2.56□□□□□ -2
ZNRF3Q9ULT6 AL365222.1-201ENST00000614661 98 ntBASIC2.56□□□□□ -2
ZNRF3Q9ULT6 AC027279.3-201ENST00000625055 122 ntBASIC2.56□□□□□ -2
ZNRF3Q9ULT6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.56□□□□□ -2
ZNRF3Q9ULT6 Z82195.2-201ENST00000612348 18351 ntBASIC2.55□□□□□ -2
ZNRF3Q9ULT6 Y_RNA.52-201ENST00000362760 96 ntBASIC2.55□□□□□ -2
ZNRF3Q9ULT6 RNU6-268P-201ENST00000364174 107 ntBASIC2.55□□□□□ -2
ZNRF3Q9ULT6 RNU6-80P-201ENST00000384195 107 ntBASIC2.55□□□□□ -2
ZNRF3Q9ULT6 RNU6-1031P-201ENST00000384773 107 ntBASIC2.55□□□□□ -2
ZNRF3Q9ULT6 MIR548A2-201ENST00000384956 97 ntBASIC2.55□□□□□ -2
ZNRF3Q9ULT6 MIR518F-201ENST00000384973 87 ntBASIC2.55□□□□□ -2
ZNRF3Q9ULT6 RNU6-1168P-201ENST00000390831 104 ntBASIC2.55□□□□□ -2
ZNRF3Q9ULT6 AC019129.1-201ENST00000403786 261 ntBASIC2.55□□□□□ -2
ZNRF3Q9ULT6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.55□□□□□ -2
ZNRF3Q9ULT6 RNA5SP181-201ENST00000410246 98 ntBASIC2.55□□□□□ -2
ZNRF3Q9ULT6 MTATP6P21-201ENST00000440681 189 ntBASIC2.55□□□□□ -2
ZNRF3Q9ULT6 RNU7-25P-201ENST00000516544 62 ntBASIC2.55□□□□□ -2
ZNRF3Q9ULT6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.55□□□□□ -2
ZNRF3Q9ULT6 AC015726.2-201ENST00000620112 122 ntBASIC2.55□□□□□ -2
ZNRF3Q9ULT6 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.55□□□□□ -2
ZNRF3Q9ULT6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
ZNRF3Q9ULT6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
ZNRF3Q9ULT6 Y_RNA.71-201ENST00000362892 104 ntBASIC2.54□□□□□ -2
ZNRF3Q9ULT6 Y_RNA.218-201ENST00000364218 104 ntBASIC2.54□□□□□ -2
ZNRF3Q9ULT6 SNORD116-14-201ENST00000383894 92 ntBASIC2.54□□□□□ -2
ZNRF3Q9ULT6 SNORD116-17-201ENST00000383929 92 ntBASIC2.54□□□□□ -2
ZNRF3Q9ULT6 SNORD116-15-201ENST00000384445 92 ntBASIC2.54□□□□□ -2
ZNRF3Q9ULT6 SNORD116-19-201ENST00000384729 92 ntBASIC2.54□□□□□ -2
ZNRF3Q9ULT6 MIR583-201ENST00000384846 75 ntBASIC2.54□□□□□ -2
ZNRF3Q9ULT6 CALM2P4-201ENST00000430810 426 ntBASIC2.54□□□□□ -2
ZNRF3Q9ULT6 snoU13.27-201ENST00000459278 104 ntBASIC2.54□□□□□ -2
ZNRF3Q9ULT6 RNU6-1333P-201ENST00000516162 93 ntBASIC2.54□□□□□ -2
ZNRF3Q9ULT6 Y_RNA.686-201ENST00000516548 134 ntBASIC2.54□□□□□ -2
ZNRF3Q9ULT6 AC134878.1-201ENST00000619901 243 ntBASIC2.54□□□□□ -2
ZNRF3Q9ULT6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
ZNRF3Q9ULT6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
ZNRF3Q9ULT6 Y_RNA.127-201ENST00000363386 109 ntBASIC2.53□□□□□ -2
ZNRF3Q9ULT6 RNU6-424P-201ENST00000384367 105 ntBASIC2.53□□□□□ -2
ZNRF3Q9ULT6 MIR891A-201ENST00000401237 79 ntBASIC2.53□□□□□ -2
ZNRF3Q9ULT6 SUMO1P4-201ENST00000429430 302 ntBASIC2.53□□□□□ -2
ZNRF3Q9ULT6 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.53□□□□□ -2
ZNRF3Q9ULT6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.53□□□□□ -2
ZNRF3Q9ULT6 AC108729.3-201ENST00000513484 108 ntBASIC2.53□□□□□ -2
ZNRF3Q9ULT6 RNU5E-3P-201ENST00000515913 68 ntBASIC2.53□□□□□ -2
ZNRF3Q9ULT6 RNA5SP182-201ENST00000516064 82 ntBASIC2.53□□□□□ -2
ZNRF3Q9ULT6 Y_RNA.690-201ENST00000516603 95 ntBASIC2.53□□□□□ -2
ZNRF3Q9ULT6 RNU6-1234P-201ENST00000516877 103 ntBASIC2.53□□□□□ -2
ZNRF3Q9ULT6 RNU6-1116P-201ENST00000517269 99 ntBASIC2.53□□□□□ -2
ZNRF3Q9ULT6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.53□□□□□ -2
ZNRF3Q9ULT6 MIR5194-201ENST00000582634 120 ntBASIC2.53□□□□□ -2
ZNRF3Q9ULT6 AC245884.12-201ENST00000615364 59 ntBASIC2.53□□□□□ -2
ZNRF3Q9ULT6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.53□□□□□ -2
ZNRF3Q9ULT6 MIRLET7C-201ENST00000362160 84 ntBASIC2.52□□□□□ -2.01
ZNRF3Q9ULT6 SNORD115-28-201ENST00000363931 81 ntBASIC2.52□□□□□ -2.01
ZNRF3Q9ULT6 RNU6-296P-201ENST00000384608 107 ntBASIC2.52□□□□□ -2.01
ZNRF3Q9ULT6 SNORA22C-201ENST00000384614 134 ntBASIC2.52□□□□□ -2.01
ZNRF3Q9ULT6 U8.16-201ENST00000391279 133 ntBASIC2.52□□□□□ -2.01
ZNRF3Q9ULT6 AL603914.1-201ENST00000401964 204 ntBASIC2.52□□□□□ -2.01
ZNRF3Q9ULT6 SNRPGP14-201ENST00000435400 219 ntBASIC2.52□□□□□ -2.01
ZNRF3Q9ULT6 RNU4-57P-201ENST00000515980 135 ntBASIC2.52□□□□□ -2.01
ZNRF3Q9ULT6 RNA5SP168-201ENST00000516642 112 ntBASIC2.52□□□□□ -2.01
ZNRF3Q9ULT6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.52□□□□□ -2.01
ZNRF3Q9ULT6 AL137847.3-201ENST00000611521 109 ntBASIC2.52□□□□□ -2.01
ZNRF3Q9ULT6 MIR7111-201ENST00000619751 72 ntBASIC2.52□□□□□ -2.01
ZNRF3Q9ULT6 Y_RNA.410-201ENST00000383992 113 ntBASIC2.51□□□□□ -2.01
ZNRF3Q9ULT6 SNORD77.3-201ENST00000391113 65 ntBASIC2.51□□□□□ -2.01
ZNRF3Q9ULT6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNRF3Q9ULT6 AF228730.3-201ENST00000436691 102 ntBASIC2.51□□□□□ -2.01
ZNRF3Q9ULT6 RNU6-1053P-201ENST00000515930 101 ntBASIC2.51□□□□□ -2.01
ZNRF3Q9ULT6 RNU7-12P-201ENST00000516030 62 ntBASIC2.51□□□□□ -2.01
ZNRF3Q9ULT6 Y_RNA.783-201ENST00000613546 102 ntBASIC2.51□□□□□ -2.01
ZNRF3Q9ULT6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.5□□□□□ -2.01
ZNRF3Q9ULT6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
ZNRF3Q9ULT6 RNU6-833P-201ENST00000363486 107 ntBASIC2.5□□□□□ -2.01
ZNRF3Q9ULT6 Y_RNA.547-201ENST00000384654 119 ntBASIC2.5□□□□□ -2.01
ZNRF3Q9ULT6 SNORA40.18-201ENST00000391200 128 ntBASIC2.5□□□□□ -2.01
ZNRF3Q9ULT6 HMGN2P35-201ENST00000412164 270 ntBASIC2.5□□□□□ -2.01
ZNRF3Q9ULT6 AC108667.1-201ENST00000428618 249 ntBASIC2.5□□□□□ -2.01
ZNRF3Q9ULT6 RNA5SP57-201ENST00000459463 123 ntBASIC2.5□□□□□ -2.01
ZNRF3Q9ULT6 RN7SKP179-201ENST00000516126 217 ntBASIC2.5□□□□□ -2.01
ZNRF3Q9ULT6 SNORA31.15-201ENST00000516771 132 ntBASIC2.5□□□□□ -2.01
ZNRF3Q9ULT6 RNU2-19P-201ENST00000517288 84 ntBASIC2.5□□□□□ -2.01
ZNRF3Q9ULT6 AL359881.1-201ENST00000602916 267 ntBASIC2.5□□□□□ -2.01
ZNRF3Q9ULT6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.5□□□□□ -2.01
ZNRF3Q9ULT6 Y_RNA.226-201ENST00000364337 114 ntBASIC2.49□□□□□ -2.01
ZNRF3Q9ULT6 RNU6-1189P-201ENST00000383958 107 ntBASIC2.49□□□□□ -2.01
ZNRF3Q9ULT6 AC090049.2-201ENST00000550377 109 ntBASIC2.49□□□□□ -2.01
ZNRF3Q9ULT6 MIR5197-201ENST00000583721 112 ntBASIC2.49□□□□□ -2.01
ZNRF3Q9ULT6 AC021506.2-201ENST00000612354 169 ntBASIC2.49□□□□□ -2.01
ZNRF3Q9ULT6 MTND5P32-201ENST00000560711 1802 ntBASIC2.49□□□□□ -2.01
ZNRF3Q9ULT6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
ZNRF3Q9ULT6 Y_RNA.261-201ENST00000364631 102 ntBASIC2.48□□□□□ -2.01
ZNRF3Q9ULT6 SNORA67.1-201ENST00000364749 141 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 246.3 ms