Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 MIR548AR-201ENST00000582191 57 ntBASIC0.53□□□□□ -2.32
CDH9Q9ULB4 AC008507.4-201ENST00000585464 127 ntBASIC0.53□□□□□ -2.32
CDH9Q9ULB4 RAC1P9-201ENST00000604990 392 ntBASIC0.53□□□□□ -2.32
CDH9Q9ULB4 AL138825.1-201ENST00000618587 192 ntBASIC0.53□□□□□ -2.32
CDH9Q9ULB4 PVT1_3.1-201ENST00000620853 95 ntBASIC0.53□□□□□ -2.32
CDH9Q9ULB4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.33
CDH9Q9ULB4 RNU6-674P-201ENST00000363831 107 ntBASIC0.52□□□□□ -2.33
CDH9Q9ULB4 RNU6-268P-201ENST00000364174 107 ntBASIC0.52□□□□□ -2.33
CDH9Q9ULB4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CDH9Q9ULB4 RNU6-1067P-201ENST00000384752 107 ntBASIC0.52□□□□□ -2.33
CDH9Q9ULB4 SNORD115-46-201ENST00000390982 71 ntBASIC0.52□□□□□ -2.33
CDH9Q9ULB4 SNORD72-201ENST00000390994 80 ntBASIC0.52□□□□□ -2.33
CDH9Q9ULB4 RNU6-994P-201ENST00000410507 111 ntBASIC0.52□□□□□ -2.33
CDH9Q9ULB4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.52□□□□□ -2.33
CDH9Q9ULB4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.52□□□□□ -2.33
CDH9Q9ULB4 RNU6-496P-201ENST00000516145 99 ntBASIC0.52□□□□□ -2.33
CDH9Q9ULB4 RNU6-830P-201ENST00000516353 107 ntBASIC0.52□□□□□ -2.33
CDH9Q9ULB4 RNU6-229P-201ENST00000516614 102 ntBASIC0.52□□□□□ -2.33
CDH9Q9ULB4 Y_RNA.714-201ENST00000517065 90 ntBASIC0.52□□□□□ -2.33
CDH9Q9ULB4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.52□□□□□ -2.33
CDH9Q9ULB4 AC005357.1-201ENST00000588399 301 ntBASIC0.52□□□□□ -2.33
CDH9Q9ULB4 RPS29P30-201ENST00000600975 111 ntBASIC0.52□□□□□ -2.33
CDH9Q9ULB4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.52□□□□□ -2.33
CDH9Q9ULB4 AC134026.1-201ENST00000623249 2239 ntBASIC0.52□□□□□ -2.33
CDH9Q9ULB4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CDH9Q9ULB4 Y_RNA.136-201ENST00000363444 102 ntBASIC0.51□□□□□ -2.33
CDH9Q9ULB4 RNU6-823P-201ENST00000391042 103 ntBASIC0.51□□□□□ -2.33
CDH9Q9ULB4 RNU1-119P-201ENST00000391122 165 ntBASIC0.51□□□□□ -2.33
CDH9Q9ULB4 RPL23AP54-201ENST00000495129 419 ntBASIC0.51□□□□□ -2.33
CDH9Q9ULB4 RNU6-764P-201ENST00000516396 105 ntBASIC0.51□□□□□ -2.33
CDH9Q9ULB4 AC018659.1-201ENST00000551083 169 ntBASIC0.51□□□□□ -2.33
CDH9Q9ULB4 MIR4711-201ENST00000578274 70 ntBASIC0.51□□□□□ -2.33
CDH9Q9ULB4 AL021707.8-201ENST00000609428 183 ntBASIC0.51□□□□□ -2.33
CDH9Q9ULB4 RNU6-654P-201ENST00000364373 107 ntBASIC0.5□□□□□ -2.33
CDH9Q9ULB4 SNORD113.3-201ENST00000364630 78 ntBASIC0.5□□□□□ -2.33
CDH9Q9ULB4 MT-TD-201ENST00000387419 68 ntBASIC0.5□□□□□ -2.33
CDH9Q9ULB4 SNORA36B-201ENST00000410438 131 ntBASIC0.5□□□□□ -2.33
CDH9Q9ULB4 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
CDH9Q9ULB4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.5□□□□□ -2.33
CDH9Q9ULB4 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
CDH9Q9ULB4 RNU6-437P-201ENST00000459408 95 ntBASIC0.5□□□□□ -2.33
CDH9Q9ULB4 Y_RNA.637-201ENST00000459424 114 ntBASIC0.5□□□□□ -2.33
CDH9Q9ULB4 RNU2-13P-201ENST00000515909 113 ntBASIC0.5□□□□□ -2.33
CDH9Q9ULB4 RNU4-57P-201ENST00000515980 135 ntBASIC0.5□□□□□ -2.33
CDH9Q9ULB4 RNU6-897P-201ENST00000517135 105 ntBASIC0.5□□□□□ -2.33
CDH9Q9ULB4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.5□□□□□ -2.33
CDH9Q9ULB4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.5□□□□□ -2.33
CDH9Q9ULB4 SNORD113-5-201ENST00000607261 78 ntBASIC0.5□□□□□ -2.33
CDH9Q9ULB4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.5□□□□□ -2.33
CDH9Q9ULB4 AC243829.3-201ENST00000622177 108 ntBASIC0.5□□□□□ -2.33
CDH9Q9ULB4 MIR6516-201ENST00000630554 81 ntBASIC0.5□□□□□ -2.33
CDH9Q9ULB4 MIR4251-201ENST00000635819 61 ntBASIC0.5□□□□□ -2.33
CDH9Q9ULB4 Y_RNA.26-201ENST00000362539 101 ntBASIC0.49□□□□□ -2.33
CDH9Q9ULB4 snoU2_19.2-201ENST00000363024 80 ntBASIC0.49□□□□□ -2.33
CDH9Q9ULB4 SNORD113-8-201ENST00000363497 74 ntBASIC0.49□□□□□ -2.33
CDH9Q9ULB4 RNU6-450P-201ENST00000364654 107 ntBASIC0.49□□□□□ -2.33
CDH9Q9ULB4 RNU6-945P-201ENST00000383947 107 ntBASIC0.49□□□□□ -2.33
CDH9Q9ULB4 RNU6-763P-201ENST00000390865 106 ntBASIC0.49□□□□□ -2.33
CDH9Q9ULB4 Y_RNA.581-201ENST00000391017 97 ntBASIC0.49□□□□□ -2.33
CDH9Q9ULB4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.49□□□□□ -2.33
CDH9Q9ULB4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.49□□□□□ -2.33
CDH9Q9ULB4 RNA5SP193-201ENST00000410353 107 ntBASIC0.49□□□□□ -2.33
CDH9Q9ULB4 AC244098.3-201ENST00000424803 96 ntBASIC0.49□□□□□ -2.33
CDH9Q9ULB4 MTCO1P5-201ENST00000433573 344 ntBASIC0.49□□□□□ -2.33
CDH9Q9ULB4 SEPT14P8-201ENST00000508026 178 ntBASIC0.49□□□□□ -2.33
CDH9Q9ULB4 AC011195.1-201ENST00000578177 177 ntBASIC0.49□□□□□ -2.33
CDH9Q9ULB4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.49□□□□□ -2.33
CDH9Q9ULB4 AC087685.1-201ENST00000587507 141 ntBASIC0.49□□□□□ -2.33
CDH9Q9ULB4 AC006441.5-201ENST00000612680 209 ntBASIC0.49□□□□□ -2.33
CDH9Q9ULB4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
CDH9Q9ULB4 AC008133.2-201ENST00000624540 351 ntBASIC0.49□□□□□ -2.33
CDH9Q9ULB4 RNU6-369P-201ENST00000362515 102 ntBASIC0.48□□□□□ -2.33
CDH9Q9ULB4 Y_RNA.28-201ENST00000362554 111 ntBASIC0.48□□□□□ -2.33
CDH9Q9ULB4 Y_RNA.138-201ENST00000363462 102 ntBASIC0.48□□□□□ -2.33
CDH9Q9ULB4 Y_RNA.183-201ENST00000363882 113 ntBASIC0.48□□□□□ -2.33
CDH9Q9ULB4 RNU6-806P-201ENST00000365147 105 ntBASIC0.48□□□□□ -2.33
CDH9Q9ULB4 Y_RNA.445-201ENST00000384168 102 ntBASIC0.48□□□□□ -2.33
CDH9Q9ULB4 Y_RNA.526-201ENST00000384572 110 ntBASIC0.48□□□□□ -2.33
CDH9Q9ULB4 RNU6-21P-201ENST00000384710 107 ntBASIC0.48□□□□□ -2.33
CDH9Q9ULB4 MIR570-201ENST00000384917 97 ntBASIC0.48□□□□□ -2.33
CDH9Q9ULB4 MIR1827-201ENST00000408549 66 ntBASIC0.48□□□□□ -2.33
CDH9Q9ULB4 ELOCP20-201ENST00000422460 345 ntBASIC0.48□□□□□ -2.33
CDH9Q9ULB4 POLR2KP2-201ENST00000438155 177 ntBASIC0.48□□□□□ -2.33
CDH9Q9ULB4 MRPS35P2-201ENST00000508242 191 ntBASIC0.48□□□□□ -2.33
CDH9Q9ULB4 RNU6-397P-201ENST00000516226 104 ntBASIC0.48□□□□□ -2.33
CDH9Q9ULB4 Y_RNA.713-201ENST00000517013 96 ntBASIC0.48□□□□□ -2.33
CDH9Q9ULB4 RPL23AP91-201ENST00000569211 455 ntBASIC0.48□□□□□ -2.33
CDH9Q9ULB4 Pinc.1-201ENST00000616452 154 ntBASIC0.48□□□□□ -2.33
CDH9Q9ULB4 AC090971.5-201ENST00000621102 293 ntBASIC0.48□□□□□ -2.33
CDH9Q9ULB4 AC022140.2-201ENST00000623500 188 ntBASIC0.48□□□□□ -2.33
CDH9Q9ULB4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.47□□□□□ -2.33
CDH9Q9ULB4 SNORD14E-201ENST00000364009 85 ntBASIC0.47□□□□□ -2.33
CDH9Q9ULB4 Y_RNA.214-201ENST00000364201 112 ntBASIC0.47□□□□□ -2.33
CDH9Q9ULB4 RNU6-342P-201ENST00000384521 104 ntBASIC0.47□□□□□ -2.33
CDH9Q9ULB4 Y_RNA.541-201ENST00000384640 113 ntBASIC0.47□□□□□ -2.33
CDH9Q9ULB4 MIR215-201ENST00000384858 110 ntBASIC0.47□□□□□ -2.33
CDH9Q9ULB4 SNORD105-201ENST00000386910 85 ntBASIC0.47□□□□□ -2.33
CDH9Q9ULB4 U8.17-201ENST00000391292 132 ntBASIC0.47□□□□□ -2.33
CDH9Q9ULB4 MIR1252-201ENST00000408861 65 ntBASIC0.47□□□□□ -2.33
CDH9Q9ULB4 RNA5SP95-201ENST00000410319 137 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms