Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 RNU6-440P-201ENST00000390882 105 ntBASIC2□□□□□ -2.09
CCNL1Q9UK58 SNORD72-201ENST00000390994 80 ntBASIC2□□□□□ -2.09
CCNL1Q9UK58 AL512604.1-201ENST00000404812 257 ntBASIC2□□□□□ -2.09
CCNL1Q9UK58 MIR548M-201ENST00000408260 86 ntBASIC2□□□□□ -2.09
CCNL1Q9UK58 Y_RNA.621-201ENST00000411065 96 ntBASIC2□□□□□ -2.09
CCNL1Q9UK58 AL158823.1-201ENST00000418441 478 ntBASIC2□□□□□ -2.09
CCNL1Q9UK58 RNU7-149P-201ENST00000516739 59 ntBASIC2□□□□□ -2.09
CCNL1Q9UK58 SNORA31.24-201ENST00000517232 57 ntBASIC2□□□□□ -2.09
CCNL1Q9UK58 MIR2681-201ENST00000581814 105 ntBASIC2□□□□□ -2.09
CCNL1Q9UK58 AC097639.2-201ENST00000603159 172 ntBASIC2□□□□□ -2.09
CCNL1Q9UK58 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2□□□□□ -2.09
CCNL1Q9UK58 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CCNL1Q9UK58 RNU6-728P-201ENST00000365375 104 ntBASIC1.99□□□□□ -2.09
CCNL1Q9UK58 Y_RNA.486-201ENST00000384398 107 ntBASIC1.99□□□□□ -2.09
CCNL1Q9UK58 RNU2-55P-201ENST00000411146 174 ntBASIC1.99□□□□□ -2.09
CCNL1Q9UK58 FTH1P12-201ENST00000432137 551 ntBASIC1.99□□□□□ -2.09
CCNL1Q9UK58 RNA5SP82-201ENST00000516707 92 ntBASIC1.99□□□□□ -2.09
CCNL1Q9UK58 AL160236.1-201ENST00000556317 195 ntBASIC1.99□□□□□ -2.09
CCNL1Q9UK58 AC008507.4-201ENST00000585464 127 ntBASIC1.99□□□□□ -2.09
CCNL1Q9UK58 AL078603.1-201ENST00000603824 313 ntBASIC1.99□□□□□ -2.09
CCNL1Q9UK58 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CCNL1Q9UK58 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CCNL1Q9UK58 MIR126-201ENST00000362291 85 ntBASIC1.98□□□□□ -2.09
CCNL1Q9UK58 Y_RNA.66-201ENST00000362862 102 ntBASIC1.98□□□□□ -2.09
CCNL1Q9UK58 RNU6-978P-201ENST00000364371 103 ntBASIC1.98□□□□□ -2.09
CCNL1Q9UK58 RNU6-53P-201ENST00000365367 106 ntBASIC1.98□□□□□ -2.09
CCNL1Q9UK58 SNORD114-22-201ENST00000365423 72 ntBASIC1.98□□□□□ -2.09
CCNL1Q9UK58 SNORD116-18-201ENST00000383961 92 ntBASIC1.98□□□□□ -2.09
CCNL1Q9UK58 SNRPGP14-201ENST00000435400 219 ntBASIC1.98□□□□□ -2.09
CCNL1Q9UK58 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.98□□□□□ -2.09
CCNL1Q9UK58 MRPS17P9-201ENST00000511924 393 ntBASIC1.98□□□□□ -2.09
CCNL1Q9UK58 Y_RNA.703-201ENST00000516846 111 ntBASIC1.98□□□□□ -2.09
CCNL1Q9UK58 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.98□□□□□ -2.09
CCNL1Q9UK58 AC078899.2-201ENST00000595282 212 ntBASIC1.98□□□□□ -2.09
CCNL1Q9UK58 AC091895.1-201ENST00000624494 256 ntBASIC1.98□□□□□ -2.09
CCNL1Q9UK58 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CCNL1Q9UK58 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CCNL1Q9UK58 Y_RNA.634-201ENST00000364811 113 ntBASIC1.97□□□□□ -2.09
CCNL1Q9UK58 SNORD50B-201ENST00000364995 70 ntBASIC1.97□□□□□ -2.09
CCNL1Q9UK58 RNU6-768P-201ENST00000384683 107 ntBASIC1.97□□□□□ -2.09
CCNL1Q9UK58 RNA5SP489-201ENST00000410986 109 ntBASIC1.97□□□□□ -2.09
CCNL1Q9UK58 SNORD116-25-201ENST00000516517 92 ntBASIC1.97□□□□□ -2.09
CCNL1Q9UK58 RNU6-197P-201ENST00000516680 100 ntBASIC1.97□□□□□ -2.09
CCNL1Q9UK58 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.97□□□□□ -2.09
CCNL1Q9UK58 MIR5694-201ENST00000581190 76 ntBASIC1.97□□□□□ -2.09
CCNL1Q9UK58 AL353770.2-201ENST00000620024 78 ntBASIC1.97□□□□□ -2.09
CCNL1Q9UK58 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.97□□□□□ -2.09
CCNL1Q9UK58 AL442644.1-201ENST00000454390 3105 ntBASIC1.96□□□□□ -2.1
CCNL1Q9UK58 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CCNL1Q9UK58 SNORA6-201ENST00000384033 151 ntBASIC1.96□□□□□ -2.1
CCNL1Q9UK58 RNU11-5P-201ENST00000391216 129 ntBASIC1.96□□□□□ -2.1
CCNL1Q9UK58 AC006461.1-201ENST00000412637 326 ntBASIC1.96□□□□□ -2.1
CCNL1Q9UK58 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.96□□□□□ -2.1
CCNL1Q9UK58 AL392103.1-201ENST00000447000 198 ntBASIC1.96□□□□□ -2.1
CCNL1Q9UK58 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.96□□□□□ -2.1
CCNL1Q9UK58 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.96□□□□□ -2.1
CCNL1Q9UK58 AC099513.1-201ENST00000490423 301 ntBASIC1.96□□□□□ -2.1
CCNL1Q9UK58 RNU6-1116P-201ENST00000517269 99 ntBASIC1.96□□□□□ -2.1
CCNL1Q9UK58 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.96□□□□□ -2.1
CCNL1Q9UK58 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCNL1Q9UK58 RNA5SP276-201ENST00000362580 94 ntBASIC1.95□□□□□ -2.1
CCNL1Q9UK58 Y_RNA.357-201ENST00000365487 109 ntBASIC1.95□□□□□ -2.1
CCNL1Q9UK58 RNU6-449P-201ENST00000383914 107 ntBASIC1.95□□□□□ -2.1
CCNL1Q9UK58 Y_RNA.432-201ENST00000384087 111 ntBASIC1.95□□□□□ -2.1
CCNL1Q9UK58 MIR548A2-201ENST00000384956 97 ntBASIC1.95□□□□□ -2.1
CCNL1Q9UK58 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CCNL1Q9UK58 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.95□□□□□ -2.1
CCNL1Q9UK58 RNU7-197P-201ENST00000458836 62 ntBASIC1.95□□□□□ -2.1
CCNL1Q9UK58 AC107027.2-201ENST00000512197 115 ntBASIC1.95□□□□□ -2.1
CCNL1Q9UK58 RNA5SP220-201ENST00000516298 104 ntBASIC1.95□□□□□ -2.1
CCNL1Q9UK58 RNU6-1299P-201ENST00000516316 100 ntBASIC1.95□□□□□ -2.1
CCNL1Q9UK58 RNA5SP153-201ENST00000516498 76 ntBASIC1.95□□□□□ -2.1
CCNL1Q9UK58 RNU2-56P-201ENST00000516826 190 ntBASIC1.95□□□□□ -2.1
CCNL1Q9UK58 JPX_2.1-201ENST00000614161 69 ntBASIC1.95□□□□□ -2.1
CCNL1Q9UK58 Pinc.1-201ENST00000616452 154 ntBASIC1.95□□□□□ -2.1
CCNL1Q9UK58 Y_RNA.778-201ENST00000620203 90 ntBASIC1.95□□□□□ -2.1
CCNL1Q9UK58 MIR6734-201ENST00000621166 68 ntBASIC1.95□□□□□ -2.1
CCNL1Q9UK58 AP000553.5-201ENST00000641933 54 ntBASIC1.95□□□□□ -2.1
CCNL1Q9UK58 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CCNL1Q9UK58 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
CCNL1Q9UK58 SNORD48-201ENST00000364953 64 ntBASIC1.94□□□□□ -2.1
CCNL1Q9UK58 RNU6-1336P-201ENST00000383886 109 ntBASIC1.94□□□□□ -2.1
CCNL1Q9UK58 Y_RNA.400-201ENST00000383963 111 ntBASIC1.94□□□□□ -2.1
CCNL1Q9UK58 MIR520A-201ENST00000384862 85 ntBASIC1.94□□□□□ -2.1
CCNL1Q9UK58 MIR569-201ENST00000385228 96 ntBASIC1.94□□□□□ -2.1
CCNL1Q9UK58 RNU6-131P-201ENST00000391144 107 ntBASIC1.94□□□□□ -2.1
CCNL1Q9UK58 RNA5SP482-201ENST00000391269 118 ntBASIC1.94□□□□□ -2.1
CCNL1Q9UK58 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.94□□□□□ -2.1
CCNL1Q9UK58 STAG3L5P-204ENST00000443759 179 ntBASIC1.94□□□□□ -2.1
CCNL1Q9UK58 AC007751.1-201ENST00000529260 376 ntBASIC1.94□□□□□ -2.1
CCNL1Q9UK58 MIR378D2-201ENST00000580636 98 ntBASIC1.94□□□□□ -2.1
CCNL1Q9UK58 AC120024.3-201ENST00000603167 156 ntBASIC1.94□□□□□ -2.1
CCNL1Q9UK58 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.94□□□□□ -2.1
CCNL1Q9UK58 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CCNL1Q9UK58 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CCNL1Q9UK58 SNORD68-201ENST00000363214 84 ntBASIC1.93□□□□□ -2.1
CCNL1Q9UK58 RNU6-151P-201ENST00000364158 107 ntBASIC1.93□□□□□ -2.1
CCNL1Q9UK58 RNU6-1082P-201ENST00000364574 107 ntBASIC1.93□□□□□ -2.1
CCNL1Q9UK58 RNU6-1031P-201ENST00000384773 107 ntBASIC1.93□□□□□ -2.1
CCNL1Q9UK58 MLLT10P1-201ENST00000418346 262 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms