Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AC015712.3-201ENST00000559380 164 ntBASIC2.52□□□□□ -2.01
DDX41Q9UJV9 SNORD3E-202ENST00000627253 216 ntBASIC2.52□□□□□ -2.01
DDX41Q9UJV9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
DDX41Q9UJV9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
DDX41Q9UJV9 SNORD114-1-201ENST00000362705 72 ntBASIC2.51□□□□□ -2.01
DDX41Q9UJV9 RNU6-704P-201ENST00000364162 103 ntBASIC2.51□□□□□ -2.01
DDX41Q9UJV9 RNU4-52P-201ENST00000384209 138 ntBASIC2.51□□□□□ -2.01
DDX41Q9UJV9 Y_RNA.497-201ENST00000384447 98 ntBASIC2.51□□□□□ -2.01
DDX41Q9UJV9 SNORA64-201ENST00000384674 134 ntBASIC2.51□□□□□ -2.01
DDX41Q9UJV9 MIR660-201ENST00000385235 97 ntBASIC2.51□□□□□ -2.01
DDX41Q9UJV9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.51□□□□□ -2.01
DDX41Q9UJV9 AL591806.2-201ENST00000433122 173 ntBASIC2.51□□□□□ -2.01
DDX41Q9UJV9 AL365205.2-201ENST00000594586 68 ntBASIC2.51□□□□□ -2.01
DDX41Q9UJV9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
DDX41Q9UJV9 MIR424-201ENST00000362227 98 ntBASIC2.5□□□□□ -2.01
DDX41Q9UJV9 MIR17-201ENST00000385012 84 ntBASIC2.5□□□□□ -2.01
DDX41Q9UJV9 MIR452-201ENST00000385020 85 ntBASIC2.5□□□□□ -2.01
DDX41Q9UJV9 RNU6-482P-201ENST00000391068 107 ntBASIC2.5□□□□□ -2.01
DDX41Q9UJV9 RNA5SP127-201ENST00000411051 133 ntBASIC2.5□□□□□ -2.01
DDX41Q9UJV9 AC007751.1-201ENST00000529260 376 ntBASIC2.5□□□□□ -2.01
DDX41Q9UJV9 AC091895.1-201ENST00000624494 256 ntBASIC2.5□□□□□ -2.01
DDX41Q9UJV9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.5□□□□□ -2.01
DDX41Q9UJV9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
DDX41Q9UJV9 RNU6-1123P-201ENST00000362347 106 ntBASIC2.49□□□□□ -2.01
DDX41Q9UJV9 RNU6-1082P-201ENST00000364574 107 ntBASIC2.49□□□□□ -2.01
DDX41Q9UJV9 RNU6-1292P-201ENST00000383856 107 ntBASIC2.49□□□□□ -2.01
DDX41Q9UJV9 SNORA67.3-201ENST00000384366 140 ntBASIC2.49□□□□□ -2.01
DDX41Q9UJV9 MIR569-201ENST00000385228 96 ntBASIC2.49□□□□□ -2.01
DDX41Q9UJV9 Y_RNA.584-201ENST00000391090 114 ntBASIC2.49□□□□□ -2.01
DDX41Q9UJV9 AL023284.1-201ENST00000403956 276 ntBASIC2.49□□□□□ -2.01
DDX41Q9UJV9 SNRPGP14-201ENST00000435400 219 ntBASIC2.49□□□□□ -2.01
DDX41Q9UJV9 RNU6-717P-201ENST00000459076 104 ntBASIC2.49□□□□□ -2.01
DDX41Q9UJV9 AC108210.2-201ENST00000503681 201 ntBASIC2.49□□□□□ -2.01
DDX41Q9UJV9 MIR3129-201ENST00000581095 76 ntBASIC2.49□□□□□ -2.01
DDX41Q9UJV9 AC134878.1-201ENST00000619901 243 ntBASIC2.49□□□□□ -2.01
DDX41Q9UJV9 AC015726.2-201ENST00000620112 122 ntBASIC2.49□□□□□ -2.01
DDX41Q9UJV9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
DDX41Q9UJV9 RNA5SP138-201ENST00000365098 114 ntBASIC2.48□□□□□ -2.01
DDX41Q9UJV9 Y_RNA.568-201ENST00000384742 113 ntBASIC2.48□□□□□ -2.01
DDX41Q9UJV9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.48□□□□□ -2.01
DDX41Q9UJV9 AC015922.2-201ENST00000435593 184 ntBASIC2.48□□□□□ -2.01
DDX41Q9UJV9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.48□□□□□ -2.01
DDX41Q9UJV9 AC099513.1-201ENST00000490423 301 ntBASIC2.48□□□□□ -2.01
DDX41Q9UJV9 RNA5SP200-201ENST00000516360 103 ntBASIC2.48□□□□□ -2.01
DDX41Q9UJV9 RNU6-426P-201ENST00000516464 97 ntBASIC2.48□□□□□ -2.01
DDX41Q9UJV9 MIR219B-201ENST00000637023 88 ntBASIC2.48□□□□□ -2.01
DDX41Q9UJV9 SNORD115-28-201ENST00000363931 81 ntBASIC2.47□□□□□ -2.01
DDX41Q9UJV9 MIR624-201ENST00000385217 97 ntBASIC2.47□□□□□ -2.01
DDX41Q9UJV9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.47□□□□□ -2.01
DDX41Q9UJV9 AC131055.1-201ENST00000584626 316 ntBASIC2.47□□□□□ -2.01
DDX41Q9UJV9 AC002984.1-201ENST00000591692 448 ntBASIC2.47□□□□□ -2.01
DDX41Q9UJV9 AC009831.4-201ENST00000620744 325 ntBASIC2.47□□□□□ -2.01
DDX41Q9UJV9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.46□□□□□ -2.02
DDX41Q9UJV9 SNORD18B-201ENST00000365659 72 ntBASIC2.46□□□□□ -2.02
DDX41Q9UJV9 Y_RNA.410-201ENST00000383992 113 ntBASIC2.46□□□□□ -2.02
DDX41Q9UJV9 SNORA1-201ENST00000384107 130 ntBASIC2.46□□□□□ -2.02
DDX41Q9UJV9 Y_RNA.547-201ENST00000384654 119 ntBASIC2.46□□□□□ -2.02
DDX41Q9UJV9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.46□□□□□ -2.02
DDX41Q9UJV9 RPS27P21-201ENST00000486977 252 ntBASIC2.46□□□□□ -2.02
DDX41Q9UJV9 RNU7-25P-201ENST00000516544 62 ntBASIC2.46□□□□□ -2.02
DDX41Q9UJV9 MIR3910-1-201ENST00000580936 111 ntBASIC2.46□□□□□ -2.02
DDX41Q9UJV9 MIR4713-201ENST00000582691 75 ntBASIC2.46□□□□□ -2.02
DDX41Q9UJV9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
DDX41Q9UJV9 RNU6-661P-201ENST00000362409 107 ntBASIC2.45□□□□□ -2.02
DDX41Q9UJV9 RNA5SP99-201ENST00000364020 114 ntBASIC2.45□□□□□ -2.02
DDX41Q9UJV9 MIR518F-201ENST00000384973 87 ntBASIC2.45□□□□□ -2.02
DDX41Q9UJV9 MIR136-201ENST00000385207 82 ntBASIC2.45□□□□□ -2.02
DDX41Q9UJV9 AC093850.1-201ENST00000454121 251 ntBASIC2.45□□□□□ -2.02
DDX41Q9UJV9 RNU6-830P-201ENST00000516353 107 ntBASIC2.45□□□□□ -2.02
DDX41Q9UJV9 AC132825.6-201ENST00000638861 357 ntBASIC2.45□□□□□ -2.02
DDX41Q9UJV9 AC010332.2-201ENST00000613083 1904 ntBASIC2.44□□□□□ -2.02
DDX41Q9UJV9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
DDX41Q9UJV9 RNU6-1336P-201ENST00000383886 109 ntBASIC2.44□□□□□ -2.02
DDX41Q9UJV9 SNORA40-201ENST00000388090 126 ntBASIC2.44□□□□□ -2.02
DDX41Q9UJV9 CYCSP49-201ENST00000420810 319 ntBASIC2.44□□□□□ -2.02
DDX41Q9UJV9 AL445646.1-201ENST00000431784 216 ntBASIC2.44□□□□□ -2.02
DDX41Q9UJV9 JTBP1-201ENST00000441314 247 ntBASIC2.44□□□□□ -2.02
DDX41Q9UJV9 AC087499.4-201ENST00000448505 178 ntBASIC2.44□□□□□ -2.02
DDX41Q9UJV9 AC092991.1-201ENST00000477176 376 ntBASIC2.44□□□□□ -2.02
DDX41Q9UJV9 MIR4778-201ENST00000577635 80 ntBASIC2.44□□□□□ -2.02
DDX41Q9UJV9 MIR4299-201ENST00000577899 72 ntBASIC2.44□□□□□ -2.02
DDX41Q9UJV9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
DDX41Q9UJV9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
DDX41Q9UJV9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
DDX41Q9UJV9 MIR548A2-201ENST00000384956 97 ntBASIC2.43□□□□□ -2.02
DDX41Q9UJV9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
DDX41Q9UJV9 MIR1267-201ENST00000408723 78 ntBASIC2.43□□□□□ -2.02
DDX41Q9UJV9 AC004965.1-201ENST00000413033 213 ntBASIC2.43□□□□□ -2.02
DDX41Q9UJV9 AP001328.1-201ENST00000528550 176 ntBASIC2.43□□□□□ -2.02
DDX41Q9UJV9 MIR6132-201ENST00000622083 109 ntBASIC2.43□□□□□ -2.02
DDX41Q9UJV9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
DDX41Q9UJV9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
DDX41Q9UJV9 RNU6-1189P-201ENST00000383958 107 ntBASIC2.42□□□□□ -2.02
DDX41Q9UJV9 Y_RNA.420-201ENST00000384043 110 ntBASIC2.42□□□□□ -2.02
DDX41Q9UJV9 SNORA48.3-201ENST00000391081 134 ntBASIC2.42□□□□□ -2.02
DDX41Q9UJV9 AL356379.1-201ENST00000414105 126 ntBASIC2.42□□□□□ -2.02
DDX41Q9UJV9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.42□□□□□ -2.02
DDX41Q9UJV9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
DDX41Q9UJV9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.42□□□□□ -2.02
DDX41Q9UJV9 AC022254.1-201ENST00000567857 235 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms