Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 MTCO2P33-201ENST00000402100 465 ntBASIC0.56□□□□□ -2.32
CLCF1Q9UBD9 MIR1278-201ENST00000408753 81 ntBASIC0.56□□□□□ -2.32
CLCF1Q9UBD9 MIR1302-7-201ENST00000408841 72 ntBASIC0.56□□□□□ -2.32
CLCF1Q9UBD9 AC023449.1-201ENST00000454464 154 ntBASIC0.56□□□□□ -2.32
CLCF1Q9UBD9 MIR2115-201ENST00000516657 100 ntBASIC0.56□□□□□ -2.32
CLCF1Q9UBD9 AL512605.2-201ENST00000592972 256 ntBASIC0.56□□□□□ -2.32
CLCF1Q9UBD9 AC006441.5-201ENST00000612680 209 ntBASIC0.56□□□□□ -2.32
CLCF1Q9UBD9 AC090971.5-201ENST00000621102 293 ntBASIC0.56□□□□□ -2.32
CLCF1Q9UBD9 MIR6516-201ENST00000630554 81 ntBASIC0.56□□□□□ -2.32
CLCF1Q9UBD9 RNU6-144P-201ENST00000383951 107 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 Y_RNA.445-201ENST00000384168 102 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 SNORA51.10-201ENST00000384418 136 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 Y_RNA.540-201ENST00000384638 111 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 SNORD72-201ENST00000390994 80 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 SNORA26.5-201ENST00000391215 123 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 RNU6-613P-201ENST00000410412 108 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 AC022028.1-201ENST00000412054 408 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 MTND4P19-201ENST00000446659 478 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 SNORD11-201ENST00000459124 84 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 RNU6-1132P-201ENST00000459214 107 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 SCARNA8-201ENST00000515924 131 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 RNU6-191P-201ENST00000516295 94 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 RNU6-1046P-201ENST00000516538 107 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 AC124312.5-201ENST00000604451 268 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 RNU6-94P-201ENST00000607728 107 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 MIR376A1-201ENST00000616574 68 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 AC015726.2-201ENST00000620112 122 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 MIR6513-201ENST00000621188 64 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 7SK.10-201ENST00000621414 298 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 AC090574.1-201ENST00000623186 233 ntBASIC0.55□□□□□ -2.32
CLCF1Q9UBD9 RNU4-90P-201ENST00000362773 141 ntBASIC0.54□□□□□ -2.32
CLCF1Q9UBD9 Y_RNA.136-201ENST00000363444 102 ntBASIC0.54□□□□□ -2.32
CLCF1Q9UBD9 Y_RNA.183-201ENST00000363882 113 ntBASIC0.54□□□□□ -2.32
CLCF1Q9UBD9 Y_RNA.813-201ENST00000364639 102 ntBASIC0.54□□□□□ -2.32
CLCF1Q9UBD9 RNU6-396P-201ENST00000365369 105 ntBASIC0.54□□□□□ -2.32
CLCF1Q9UBD9 SNORA2B-201ENST00000384583 137 ntBASIC0.54□□□□□ -2.32
CLCF1Q9UBD9 MIR570-201ENST00000384917 97 ntBASIC0.54□□□□□ -2.32
CLCF1Q9UBD9 AL603910.2-201ENST00000407268 136 ntBASIC0.54□□□□□ -2.32
CLCF1Q9UBD9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.54□□□□□ -2.32
CLCF1Q9UBD9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.54□□□□□ -2.32
CLCF1Q9UBD9 RPS26P5-201ENST00000418544 335 ntBASIC0.54□□□□□ -2.32
CLCF1Q9UBD9 RNU7-181P-201ENST00000517234 74 ntBASIC0.54□□□□□ -2.32
CLCF1Q9UBD9 MIR4300-201ENST00000581016 96 ntBASIC0.54□□□□□ -2.32
CLCF1Q9UBD9 LARP7P1-201ENST00000605576 316 ntBASIC0.54□□□□□ -2.32
CLCF1Q9UBD9 AC068700.1-201ENST00000565862 3754 ntBASIC0.53□□□□□ -2.32
CLCF1Q9UBD9 RNU6-1205P-201ENST00000363625 106 ntBASIC0.53□□□□□ -2.32
CLCF1Q9UBD9 RNU6-654P-201ENST00000364373 107 ntBASIC0.53□□□□□ -2.32
CLCF1Q9UBD9 Y_RNA.418-201ENST00000384029 102 ntBASIC0.53□□□□□ -2.32
CLCF1Q9UBD9 Y_RNA.569-201ENST00000384749 103 ntBASIC0.53□□□□□ -2.32
CLCF1Q9UBD9 SNORD99-201ENST00000408612 74 ntBASIC0.53□□□□□ -2.32
CLCF1Q9UBD9 Y_RNA.602-201ENST00000410535 92 ntBASIC0.53□□□□□ -2.32
CLCF1Q9UBD9 RNU6-847P-201ENST00000411115 108 ntBASIC0.53□□□□□ -2.32
CLCF1Q9UBD9 RNU6-764P-201ENST00000516396 105 ntBASIC0.53□□□□□ -2.32
CLCF1Q9UBD9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.53□□□□□ -2.32
CLCF1Q9UBD9 MIR4791-201ENST00000607666 84 ntBASIC0.53□□□□□ -2.32
CLCF1Q9UBD9 MIR369-201ENST00000362155 70 ntBASIC0.52□□□□□ -2.33
CLCF1Q9UBD9 SNORD42.2-201ENST00000365570 69 ntBASIC0.52□□□□□ -2.33
CLCF1Q9UBD9 SNORD115-46-201ENST00000390982 71 ntBASIC0.52□□□□□ -2.33
CLCF1Q9UBD9 HSPE1P25-201ENST00000455484 251 ntBASIC0.52□□□□□ -2.33
CLCF1Q9UBD9 Y_RNA.639-201ENST00000458981 102 ntBASIC0.52□□□□□ -2.33
CLCF1Q9UBD9 COX6CP6-201ENST00000490840 228 ntBASIC0.52□□□□□ -2.33
CLCF1Q9UBD9 RNU6-397P-201ENST00000516226 104 ntBASIC0.52□□□□□ -2.33
CLCF1Q9UBD9 Y_RNA.715-201ENST00000517082 110 ntBASIC0.52□□□□□ -2.33
CLCF1Q9UBD9 Y_RNA.721-201ENST00000517207 102 ntBASIC0.52□□□□□ -2.33
CLCF1Q9UBD9 AC012433.1-201ENST00000588916 398 ntBASIC0.52□□□□□ -2.33
CLCF1Q9UBD9 C8orf59P2-201ENST00000603441 271 ntBASIC0.52□□□□□ -2.33
CLCF1Q9UBD9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.52□□□□□ -2.33
CLCF1Q9UBD9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
CLCF1Q9UBD9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 MIR1-1-201ENST00000362147 71 ntBASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 RNA5SP347-201ENST00000362445 119 ntBASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 Y_RNA.168-201ENST00000363740 102 ntBASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 Y_RNA.376-201ENST00000365638 108 ntBASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 RNU6-763P-201ENST00000390865 106 ntBASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 RNU6-308P-201ENST00000390957 107 ntBASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 MIR1827-201ENST00000408549 66 ntBASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 RNA5SP95-201ENST00000410319 137 ntBASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 RNU6-101P-201ENST00000410323 104 ntBASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 RNU6-733P-201ENST00000410759 104 ntBASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 MTND4LP30-201ENST00000454092 297 ntBASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 AC107297.1-201ENST00000459991 176 ntBASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 RNU4-57P-201ENST00000515980 135 ntBASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 RNU6-496P-201ENST00000516145 99 ntBASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 AC004817.2-201ENST00000561794 651 ntBASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 MTND1P7-201ENST00000632801 297 ntBASIC0.51□□□□□ -2.33
CLCF1Q9UBD9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
CLCF1Q9UBD9 RNA5SP499-201ENST00000363982 119 ntBASIC0.5□□□□□ -2.33
CLCF1Q9UBD9 RNU6-102P-201ENST00000384485 104 ntBASIC0.5□□□□□ -2.33
CLCF1Q9UBD9 RNU6-342P-201ENST00000384521 104 ntBASIC0.5□□□□□ -2.33
CLCF1Q9UBD9 MIR613-201ENST00000385248 95 ntBASIC0.5□□□□□ -2.33
CLCF1Q9UBD9 RNU6-823P-201ENST00000391042 103 ntBASIC0.5□□□□□ -2.33
CLCF1Q9UBD9 Y_RNA.645-201ENST00000391229 102 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms