Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AL359881.1-201ENST00000602916 267 ntBASIC-1.51□□□□□ -2.65
CHD7Q9P2D1 AC026585.1-201ENST00000619582 524 ntBASIC-1.51□□□□□ -2.65
CHD7Q9P2D1 Six3os1_7.1-201ENST00000621512 201 ntBASIC-1.51□□□□□ -2.65
CHD7Q9P2D1 SNORD115-4-201ENST00000363810 82 ntBASIC-1.51□□□□□ -2.65
CHD7Q9P2D1 SNORD115-6-201ENST00000363942 82 ntBASIC-1.51□□□□□ -2.65
CHD7Q9P2D1 SNORA1.2-201ENST00000365189 134 ntBASIC-1.51□□□□□ -2.65
CHD7Q9P2D1 MTND4P3-201ENST00000417829 541 ntBASIC-1.51□□□□□ -2.65
CHD7Q9P2D1 EEF1E1P1-201ENST00000446998 430 ntBASIC-1.51□□□□□ -2.65
CHD7Q9P2D1 RNU6-341P-201ENST00000516973 96 ntBASIC-1.51□□□□□ -2.65
CHD7Q9P2D1 AC055872.1-201ENST00000570978 278 ntBASIC-1.51□□□□□ -2.65
CHD7Q9P2D1 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.52□□□□□ -2.65
CHD7Q9P2D1 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.52□□□□□ -2.65
CHD7Q9P2D1 SNORD12C-201ENST00000386307 89 ntBASIC-1.52□□□□□ -2.65
CHD7Q9P2D1 SNORD65.1-201ENST00000390889 71 ntBASIC-1.52□□□□□ -2.65
CHD7Q9P2D1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.52□□□□□ -2.65
CHD7Q9P2D1 AL139421.1-201ENST00000423010 169 ntBASIC-1.52□□□□□ -2.65
CHD7Q9P2D1 AC093423.1-201ENST00000440817 142 ntBASIC-1.52□□□□□ -2.65
CHD7Q9P2D1 AC096586.1-201ENST00000610267 561 ntBASIC-1.52□□□□□ -2.65
CHD7Q9P2D1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-1.52□□□□□ -2.65
CHD7Q9P2D1 AL589826.1-201ENST00000340697 249 ntBASIC-1.52□□□□□ -2.65
CHD7Q9P2D1 RNU6-1066P-201ENST00000363573 105 ntBASIC-1.52□□□□□ -2.65
CHD7Q9P2D1 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.52□□□□□ -2.65
CHD7Q9P2D1 MIR548AY-201ENST00000617669 107 ntBASIC-1.52□□□□□ -2.65
CHD7Q9P2D1 MIR525-201ENST00000384978 85 ntBASIC-1.53□□□□□ -2.65
CHD7Q9P2D1 AC097510.1-201ENST00000510945 133 ntBASIC-1.53□□□□□ -2.65
CHD7Q9P2D1 RNU6-415P-201ENST00000516252 97 ntBASIC-1.53□□□□□ -2.65
CHD7Q9P2D1 MTND1P35-201ENST00000526739 508 ntBASIC-1.53□□□□□ -2.65
CHD7Q9P2D1 MIR4762-201ENST00000585261 75 ntBASIC-1.53□□□□□ -2.65
CHD7Q9P2D1 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.53□□□□□ -2.65
CHD7Q9P2D1 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.53□□□□□ -2.65
CHD7Q9P2D1 RNU6-449P-201ENST00000383914 107 ntBASIC-1.53□□□□□ -2.65
CHD7Q9P2D1 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.53□□□□□ -2.65
CHD7Q9P2D1 AL359634.1-202ENST00000404721 284 ntBASIC-1.53□□□□□ -2.65
CHD7Q9P2D1 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-1.53□□□□□ -2.65
CHD7Q9P2D1 MTCO2P6-201ENST00000463134 685 ntBASIC-1.53□□□□□ -2.65
CHD7Q9P2D1 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.53□□□□□ -2.65
CHD7Q9P2D1 RNA5SP106-201ENST00000517274 100 ntBASIC-1.53□□□□□ -2.65
CHD7Q9P2D1 MIR4460-201ENST00000577862 86 ntBASIC-1.53□□□□□ -2.65
CHD7Q9P2D1 MIR548H5-201ENST00000580314 60 ntBASIC-1.53□□□□□ -2.65
CHD7Q9P2D1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
CHD7Q9P2D1 AL020997.3-201ENST00000602843 359 ntBASIC-1.53□□□□□ -2.65
CHD7Q9P2D1 RNU6-653P-201ENST00000363074 106 ntBASIC-1.53□□□□□ -2.66
CHD7Q9P2D1 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.53□□□□□ -2.66
CHD7Q9P2D1 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.53□□□□□ -2.66
CHD7Q9P2D1 RNU6-602P-201ENST00000411155 105 ntBASIC-1.53□□□□□ -2.66
CHD7Q9P2D1 RNU6-384P-201ENST00000364900 104 ntBASIC-1.54□□□□□ -2.66
CHD7Q9P2D1 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.54□□□□□ -2.66
CHD7Q9P2D1 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.54□□□□□ -2.66
CHD7Q9P2D1 EPS15P1-201ENST00000448836 336 ntBASIC-1.54□□□□□ -2.66
CHD7Q9P2D1 RNU7-67P-201ENST00000459003 62 ntBASIC-1.54□□□□□ -2.66
CHD7Q9P2D1 RNU7-181P-201ENST00000517234 74 ntBASIC-1.54□□□□□ -2.66
CHD7Q9P2D1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-1.54□□□□□ -2.66
CHD7Q9P2D1 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.54□□□□□ -2.66
CHD7Q9P2D1 U3.4-201ENST00000363352 213 ntBASIC-1.54□□□□□ -2.66
CHD7Q9P2D1 RNU6-324P-201ENST00000363957 106 ntBASIC-1.54□□□□□ -2.66
CHD7Q9P2D1 MIR582-201ENST00000365731 98 ntBASIC-1.54□□□□□ -2.66
CHD7Q9P2D1 Y_RNA.534-201ENST00000384599 112 ntBASIC-1.54□□□□□ -2.66
CHD7Q9P2D1 MIR522-201ENST00000385071 87 ntBASIC-1.54□□□□□ -2.66
CHD7Q9P2D1 RNU2-28P-201ENST00000410457 189 ntBASIC-1.54□□□□□ -2.66
CHD7Q9P2D1 SNORA43.2-201ENST00000516652 128 ntBASIC-1.54□□□□□ -2.66
CHD7Q9P2D1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.54□□□□□ -2.66
CHD7Q9P2D1 AC137590.2-201ENST00000619709 240 ntBASIC-1.54□□□□□ -2.66
CHD7Q9P2D1 U4.7-201ENST00000638126 106 ntBASIC-1.54□□□□□ -2.66
CHD7Q9P2D1 SNORD115-21-201ENST00000362963 81 ntBASIC-1.55□□□□□ -2.66
CHD7Q9P2D1 MTCO2P11-201ENST00000431069 680 ntBASIC-1.55□□□□□ -2.66
CHD7Q9P2D1 RPS3AP52-201ENST00000435639 297 ntBASIC-1.55□□□□□ -2.66
CHD7Q9P2D1 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.55□□□□□ -2.66
CHD7Q9P2D1 SNORA72.3-201ENST00000365074 132 ntBASIC-1.55□□□□□ -2.66
CHD7Q9P2D1 RNU6-101P-201ENST00000410323 104 ntBASIC-1.55□□□□□ -2.66
CHD7Q9P2D1 RNU6-1315P-201ENST00000517187 99 ntBASIC-1.55□□□□□ -2.66
CHD7Q9P2D1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-1.55□□□□□ -2.66
CHD7Q9P2D1 RNA5SP403-201ENST00000363598 108 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 RNU6-190P-201ENST00000384154 102 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 RNU5A-5P-201ENST00000411054 116 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 RPL23AP30-201ENST00000432419 501 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 snoU13.10-201ENST00000459301 103 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 RNU7-172P-201ENST00000517125 64 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 RNU7-10P-201ENST00000607194 63 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 AL359880.1-201ENST00000621879 266 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 AC090617.8-201ENST00000623339 167 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 MTCO2P16-201ENST00000436962 677 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 AC012467.1-201ENST00000607740 256 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 TCL6_2.1-201ENST00000615162 119 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 AC091931.1-201ENST00000623488 728 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 RNA5SP133-201ENST00000363368 119 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 AC010975.2-201ENST00000427781 588 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 RNU6-914P-201ENST00000516749 109 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 MTND1P24-201ENST00000552175 861 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 AC022441.3-201ENST00000605737 136 ntBASIC-1.56□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms