Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.89□□□□□ -2.11
MKS1Q9NXB0 Y_RNA.357-201ENST00000365487 109 ntBASIC1.89□□□□□ -2.11
MKS1Q9NXB0 Y_RNA.441-201ENST00000384123 112 ntBASIC1.89□□□□□ -2.11
MKS1Q9NXB0 Y_RNA.547-201ENST00000384654 119 ntBASIC1.89□□□□□ -2.11
MKS1Q9NXB0 MIR548A2-201ENST00000384956 97 ntBASIC1.89□□□□□ -2.11
MKS1Q9NXB0 MT-TR-201ENST00000387439 65 ntBASIC1.89□□□□□ -2.11
MKS1Q9NXB0 AL445646.1-201ENST00000431784 216 ntBASIC1.89□□□□□ -2.11
MKS1Q9NXB0 AC107027.2-201ENST00000512197 115 ntBASIC1.89□□□□□ -2.11
MKS1Q9NXB0 RPL23AP94-201ENST00000512518 302 ntBASIC1.89□□□□□ -2.11
MKS1Q9NXB0 AC007751.1-201ENST00000529260 376 ntBASIC1.89□□□□□ -2.11
MKS1Q9NXB0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.89□□□□□ -2.11
MKS1Q9NXB0 AL365434.2-201ENST00000607979 234 ntBASIC1.89□□□□□ -2.11
MKS1Q9NXB0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
MKS1Q9NXB0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
MKS1Q9NXB0 SNORD33-201ENST00000362761 85 ntBASIC1.88□□□□□ -2.11
MKS1Q9NXB0 RNU4-84P-201ENST00000364200 139 ntBASIC1.88□□□□□ -2.11
MKS1Q9NXB0 MIR518F-201ENST00000384973 87 ntBASIC1.88□□□□□ -2.11
MKS1Q9NXB0 RNA5SP425-201ENST00000410336 112 ntBASIC1.88□□□□□ -2.11
MKS1Q9NXB0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.88□□□□□ -2.11
MKS1Q9NXB0 AC079140.2-201ENST00000506193 142 ntBASIC1.88□□□□□ -2.11
MKS1Q9NXB0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.88□□□□□ -2.11
MKS1Q9NXB0 SNORD116-25-201ENST00000516517 92 ntBASIC1.88□□□□□ -2.11
MKS1Q9NXB0 RNU6-1270P-201ENST00000517128 108 ntBASIC1.88□□□□□ -2.11
MKS1Q9NXB0 MIR3122-201ENST00000577243 73 ntBASIC1.88□□□□□ -2.11
MKS1Q9NXB0 MIR1273D-201ENST00000577266 86 ntBASIC1.88□□□□□ -2.11
MKS1Q9NXB0 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.88□□□□□ -2.11
MKS1Q9NXB0 MIR219B-201ENST00000637023 88 ntBASIC1.88□□□□□ -2.11
MKS1Q9NXB0 RNU6-978P-201ENST00000364371 103 ntBASIC1.87□□□□□ -2.11
MKS1Q9NXB0 RNU6-322P-201ENST00000516010 103 ntBASIC1.87□□□□□ -2.11
MKS1Q9NXB0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.87□□□□□ -2.11
MKS1Q9NXB0 MIR4285-201ENST00000581001 85 ntBASIC1.87□□□□□ -2.11
MKS1Q9NXB0 AL513534.2-201ENST00000603836 250 ntBASIC1.87□□□□□ -2.11
MKS1Q9NXB0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
MKS1Q9NXB0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
MKS1Q9NXB0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
MKS1Q9NXB0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
MKS1Q9NXB0 Y_RNA.180-201ENST00000363867 113 ntBASIC1.86□□□□□ -2.11
MKS1Q9NXB0 SNORA64-201ENST00000384674 134 ntBASIC1.86□□□□□ -2.11
MKS1Q9NXB0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
MKS1Q9NXB0 RNU6-239P-201ENST00000390990 99 ntBASIC1.86□□□□□ -2.11
MKS1Q9NXB0 RNU1-78P-201ENST00000391248 165 ntBASIC1.86□□□□□ -2.11
MKS1Q9NXB0 SNORA3.2-201ENST00000408221 125 ntBASIC1.86□□□□□ -2.11
MKS1Q9NXB0 SNX2P2-201ENST00000424553 323 ntBASIC1.86□□□□□ -2.11
MKS1Q9NXB0 AC027119.1-201ENST00000440877 241 ntBASIC1.86□□□□□ -2.11
MKS1Q9NXB0 RNU4-57P-201ENST00000515980 135 ntBASIC1.86□□□□□ -2.11
MKS1Q9NXB0 SNRPGP19-201ENST00000603826 189 ntBASIC1.86□□□□□ -2.11
MKS1Q9NXB0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.86□□□□□ -2.11
MKS1Q9NXB0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
MKS1Q9NXB0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
MKS1Q9NXB0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
MKS1Q9NXB0 SNORA16.1-201ENST00000364597 132 ntBASIC1.85□□□□□ -2.11
MKS1Q9NXB0 SNORD48-201ENST00000364953 64 ntBASIC1.85□□□□□ -2.11
MKS1Q9NXB0 AL451046.2-201ENST00000403074 277 ntBASIC1.85□□□□□ -2.11
MKS1Q9NXB0 MIR548I3-201ENST00000408378 149 ntBASIC1.85□□□□□ -2.11
MKS1Q9NXB0 MIR548I1-201ENST00000408810 149 ntBASIC1.85□□□□□ -2.11
MKS1Q9NXB0 RNU6-1135P-201ENST00000411083 103 ntBASIC1.85□□□□□ -2.11
MKS1Q9NXB0 Z98742.3-201ENST00000418637 326 ntBASIC1.85□□□□□ -2.11
MKS1Q9NXB0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.85□□□□□ -2.11
MKS1Q9NXB0 AC019176.1-201ENST00000518519 225 ntBASIC1.85□□□□□ -2.11
MKS1Q9NXB0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.84□□□□□ -2.11
MKS1Q9NXB0 SNORD115-28-201ENST00000363931 81 ntBASIC1.84□□□□□ -2.11
MKS1Q9NXB0 Y_RNA.272-201ENST00000364696 102 ntBASIC1.84□□□□□ -2.11
MKS1Q9NXB0 Y_RNA.337-201ENST00000365312 102 ntBASIC1.84□□□□□ -2.11
MKS1Q9NXB0 Y_RNA.521-201ENST00000384560 114 ntBASIC1.84□□□□□ -2.11
MKS1Q9NXB0 SNORD41-201ENST00000386967 70 ntBASIC1.84□□□□□ -2.11
MKS1Q9NXB0 U8.17-201ENST00000391292 132 ntBASIC1.84□□□□□ -2.11
MKS1Q9NXB0 RN7SKP223-201ENST00000410582 62 ntBASIC1.84□□□□□ -2.11
MKS1Q9NXB0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
MKS1Q9NXB0 SNORD123-201ENST00000459473 70 ntBASIC1.84□□□□□ -2.11
MKS1Q9NXB0 RNU7-121P-201ENST00000516604 62 ntBASIC1.84□□□□□ -2.11
MKS1Q9NXB0 RNU6-922P-201ENST00000516753 99 ntBASIC1.84□□□□□ -2.11
MKS1Q9NXB0 SNORA18.7-201ENST00000516910 131 ntBASIC1.84□□□□□ -2.11
MKS1Q9NXB0 RNU6-250P-201ENST00000516958 103 ntBASIC1.84□□□□□ -2.11
MKS1Q9NXB0 AC024614.2-201ENST00000577584 372 ntBASIC1.84□□□□□ -2.11
MKS1Q9NXB0 MIR3937-201ENST00000580135 106 ntBASIC1.84□□□□□ -2.11
MKS1Q9NXB0 MIR4422-201ENST00000581938 83 ntBASIC1.84□□□□□ -2.11
MKS1Q9NXB0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
MKS1Q9NXB0 SNORA1-201ENST00000384107 130 ntBASIC1.83□□□□□ -2.12
MKS1Q9NXB0 RNU6-209P-201ENST00000384118 107 ntBASIC1.83□□□□□ -2.12
MKS1Q9NXB0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.83□□□□□ -2.12
MKS1Q9NXB0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.83□□□□□ -2.12
MKS1Q9NXB0 SNORA74.3-201ENST00000517108 154 ntBASIC1.83□□□□□ -2.12
MKS1Q9NXB0 AC134878.1-201ENST00000619901 243 ntBASIC1.83□□□□□ -2.12
MKS1Q9NXB0 Y_RNA.37-201ENST00000362606 108 ntBASIC1.82□□□□□ -2.12
MKS1Q9NXB0 RNA5SP126-201ENST00000365092 109 ntBASIC1.82□□□□□ -2.12
MKS1Q9NXB0 RNU6-597P-201ENST00000365620 102 ntBASIC1.82□□□□□ -2.12
MKS1Q9NXB0 Y_RNA.393-201ENST00000383936 102 ntBASIC1.82□□□□□ -2.12
MKS1Q9NXB0 RNU6-1065P-201ENST00000384513 106 ntBASIC1.82□□□□□ -2.12
MKS1Q9NXB0 Y_RNA.542-201ENST00000384641 111 ntBASIC1.82□□□□□ -2.12
MKS1Q9NXB0 RNU6-394P-201ENST00000410735 107 ntBASIC1.82□□□□□ -2.12
MKS1Q9NXB0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.82□□□□□ -2.12
MKS1Q9NXB0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.82□□□□□ -2.12
MKS1Q9NXB0 AF228730.3-201ENST00000436691 102 ntBASIC1.82□□□□□ -2.12
MKS1Q9NXB0 AC245517.4-201ENST00000448601 281 ntBASIC1.82□□□□□ -2.12
MKS1Q9NXB0 RNA5SP445-201ENST00000515889 115 ntBASIC1.82□□□□□ -2.12
MKS1Q9NXB0 RNU6-970P-201ENST00000516312 107 ntBASIC1.82□□□□□ -2.12
MKS1Q9NXB0 AL365205.2-201ENST00000594586 68 ntBASIC1.82□□□□□ -2.12
MKS1Q9NXB0 AC104465.1-201ENST00000611365 139 ntBASIC1.82□□□□□ -2.12
MKS1Q9NXB0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
MKS1Q9NXB0 RNU6-768P-201ENST00000384683 107 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms